RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 CADM4Q8NFZ8 388 aa15.13■□□□□ 0.01
FANCA-220ENST00000566409 OR52K2Q8NGK3 314 aa15.13■□□□□ 0.01
FANCA-220ENST00000566409 OR2I1PQ8NGU4 316 aa15.13■□□□□ 0.01
FANCA-220ENST00000566409 CPA5Q8WXQ8 436 aa15.13■□□□□ 0.01
FANCA-220ENST00000566409 FOXJ1Q92949 421 aa15.13■□□□□ 0.01
FANCA-220ENST00000566409 C18orf8Q96DM3 657 aa15.13■□□□□ 0.01
FANCA-220ENST00000566409 NUP58Q9BVL2 599 aa15.13■□□□□ 0.01
FANCA-220ENST00000566409 PDCL3Q9H2J4 239 aa15.13■□□□□ 0.01
FANCA-220ENST00000566409 FAM207AQ9NSI2 230 aaPredicted RBP15.13■□□□□ 0.01
FANCA-220ENST00000566409 KIAA1522Q9P206 1035 aaPredicted RBP15.13■□□□□ 0.01
FANCA-220ENST00000566409 SUN2Q9UH99 717 aa15.13■□□□□ 0.01
FANCA-220ENST00000566409 LIMA1Q9UHB6 759 aaKnown RBP15.13■□□□□ 0.01
FANCA-220ENST00000566409 SLC12A6Q9UHW9 1150 aa15.13■□□□□ 0.01
FANCA-220ENST00000566409 ERVW-1Q9UQF0 538 aa15.13■□□□□ 0.01
FANCA-220ENST00000566409 CEP83Q9Y592 693 aa15.13■□□□□ 0.01
FANCA-220ENST00000566409 SPEGQ15772 3267 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 LRRC10BA6NIK2 292 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 METTL12A8MUP2 240 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 TTC34A8MYJ7 566 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 SIN3BO75182 1162 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 PAGE1O75459 146 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 GFPT2O94808 682 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 LSM8O95777 96 aaKnown RBP15.12■□□□□ 0.01
FANCA-220ENST00000566409 ASLP04424 464 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 ACADMP11310 421 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 ZNF18P17022 549 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 FLT3P36888 993 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 CXCR3P49682 368 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 STK19P49842 368 aaPredicted RBP15.12■□□□□ 0.01
FANCA-220ENST00000566409 NOMO3P69849 1222 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 MYL5Q02045 173 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 GFPT1Q06210 699 aaPredicted RBP15.12■□□□□ 0.01
FANCA-220ENST00000566409 ARID5BQ14865 1188 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 STX1AQ16623 288 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 UAP1L1Q3KQV9 507 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 C9orf64Q5T6V5 341 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 DCAF12L1Q5VU92 463 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 DAB2IPQ5VWQ8 1189 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 DHX40Q8IX18 779 aaKnown RBP15.12■□□□□ 0.01
FANCA-220ENST00000566409 ZNF683Q8IZ20 524 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 KDM1BQ8NB78 822 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 C1orf216Q8TAB5 229 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 RNF34Q969K3 372 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 ALG14Q96F25 216 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 RPL10LQ96L21 214 aaKnown RBP15.12■□□□□ 0.01
FANCA-220ENST00000566409 TBCBQ99426 244 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 RSPH9Q9H1X1 276 aaPredicted RBP15.12■□□□□ 0.01
FANCA-220ENST00000566409 C6orf106Q9H6K1 298 aaPredicted RBP15.12■□□□□ 0.01
FANCA-220ENST00000566409 NLRC4Q9NPP4 1024 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 TMPRSS4Q9NRS4 437 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 ANO10Q9NW15 660 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 ARHGEF38Q9NXL2 777 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.12■□□□□ 0.01
FANCA-220ENST00000566409 TMEM63CQ9P1W3 806 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 TMEM59LQ9UK28 342 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 VANGL2Q9ULK5 521 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 SNX10Q9Y5X0 201 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 SLCO1B1Q9Y6L6 691 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 KMT2BQ9UMN6 2715 aaPredicted RBP15.12■□□□□ 0.01
FANCA-220ENST00000566409 ASPMQ8IZT6 3477 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 USP24Q9UPU5 2620 aa15.12■□□□□ 0.01
FANCA-220ENST00000566409 A0A1B0GVM2 712 aa15.11■□□□□ 0.01
FANCA-220ENST00000566409 TCAF2A6NFQ2 919 aa15.11■□□□□ 0.01
FANCA-220ENST00000566409 GOLGA6L22H0YM25 854 aa15.11■□□□□ 0.01
FANCA-220ENST00000566409 ARHGAP33O14559 1287 aa15.11■□□□□ 0.01
FANCA-220ENST00000566409 CYP1A1P04798 512 aaPredicted RBP15.11■□□□□ 0.01
FANCA-220ENST00000566409 SRPRAP08240 638 aaKnown RBP15.11■□□□□ 0.01
FANCA-220ENST00000566409 PDGFRAP16234 1089 aa15.11■□□□□ 0.01
FANCA-220ENST00000566409 SOX5P35711 763 aa15.11■□□□□ 0.01
FANCA-220ENST00000566409 SCNN1AP37088 669 aa15.11■□□□□ 0.01
FANCA-220ENST00000566409 PLK1P53350 603 aa15.11■□□□□ 0.01
FANCA-220ENST00000566409 ECT2LQ008S8 904 aa15.11■□□□□ 0.01
FANCA-220ENST00000566409 FMO1Q01740 532 aa15.11■□□□□ 0.01
FANCA-220ENST00000566409 SYCP1Q15431 976 aa15.11■□□□□ 0.01
FANCA-220ENST00000566409 C5orf22Q49AR2 442 aa15.11■□□□□ 0.01
FANCA-220ENST00000566409 WDR45BQ5MNZ6 344 aa15.11■□□□□ 0.01
FANCA-220ENST00000566409 SYCP2LQ5T4T6 812 aa15.11■□□□□ 0.01
FANCA-220ENST00000566409 CCDC183Q5T5S1 534 aa15.11■□□□□ 0.01
FANCA-220ENST00000566409 FAM102AQ5T9C2 384 aaPredicted RBP15.11■□□□□ 0.01
FANCA-220ENST00000566409 SH3PXD2AQ5TCZ1 1133 aa15.11■□□□□ 0.01
FANCA-220ENST00000566409 NAA35Q5VZE5 725 aa15.11■□□□□ 0.01
FANCA-220ENST00000566409 PSAPL1Q6NUJ1 521 aa15.11■□□□□ 0.01
FANCA-220ENST00000566409 BNIPLQ7Z465 357 aa15.11■□□□□ 0.01
FANCA-220ENST00000566409 CCDC117Q8IWD4 279 aaPredicted RBP15.11■□□□□ 0.01
FANCA-220ENST00000566409 PTPRN2Q92932 1015 aa15.11■□□□□ 0.01
FANCA-220ENST00000566409 PGAP3Q96FM1 320 aaPredicted RBP15.11■□□□□ 0.01
FANCA-220ENST00000566409 FAM129BQ96TA1 746 aa15.11■□□□□ 0.01
FANCA-220ENST00000566409 FBRSQ9HAH7 460 aa15.11■□□□□ 0.01
FANCA-220ENST00000566409 RRN3Q9NYV6 651 aa15.11■□□□□ 0.01
FANCA-220ENST00000566409 OR51B4Q9Y5P0 310 aa15.11■□□□□ 0.01
FANCA-220ENST00000566409 ITIH6Q6UXX5 1313 aa15.11■□□□□ 0.01
FANCA-220ENST00000566409 DOCK9Q9BZ29 2069 aa15.1■□□□□ 0.01
FANCA-220ENST00000566409 LGALS16A8MUM7 142 aa15.1■□□□□ 0.01
FANCA-220ENST00000566409 GOLGA8SH3BPF8 625 aa15.1■□□□□ 0.01
FANCA-220ENST00000566409 CNTN5O94779 1100 aa15.1■□□□□ 0.01
FANCA-220ENST00000566409 MBD3O95983 291 aa15.1■□□□□ 0.01
FANCA-220ENST00000566409 ATP1A3P13637 1013 aa15.1■□□□□ 0.01
FANCA-220ENST00000566409 VAV1P15498 845 aa15.1■□□□□ 0.01
FANCA-220ENST00000566409 CSRP1P21291 193 aaKnown RBP15.1■□□□□ 0.01
FANCA-220ENST00000566409 SULT1E1P49888 294 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms