RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 MOCS3O95396 460 aa16.33■□□□□ 0.2
RABGGTA-206ENST00000558649 HLA-EP13747 358 aa16.33■□□□□ 0.2
RABGGTA-206ENST00000558649 GALCP54803 685 aa16.33■□□□□ 0.2
RABGGTA-206ENST00000558649 ZNF252P-AS1Q0IIN9 211 aa16.33■□□□□ 0.2
RABGGTA-206ENST00000558649 MAPK8IP2Q13387 824 aaPredicted RBP16.33■□□□□ 0.2
RABGGTA-206ENST00000558649 SLC18A3Q16572 532 aa16.33■□□□□ 0.2
RABGGTA-206ENST00000558649 EFHC2Q5JST6 749 aa16.33■□□□□ 0.2
RABGGTA-206ENST00000558649 KIAA1211LQ6NV74 962 aa16.33■□□□□ 0.2
RABGGTA-206ENST00000558649 RWDD4Q6NW29 188 aaKnown RBP16.33■□□□□ 0.2
RABGGTA-206ENST00000558649 SERPINA13PQ6UXR4 307 aa16.33■□□□□ 0.2
RABGGTA-206ENST00000558649 KIAA0907Q7Z7F0 614 aaPredicted RBP16.33■□□□□ 0.2
RABGGTA-206ENST00000558649 SLFN11Q7Z7L1 901 aa16.33■□□□□ 0.2
RABGGTA-206ENST00000558649 APCDD1Q8J025 514 aa16.33■□□□□ 0.2
RABGGTA-206ENST00000558649 ZNF366Q8N895 744 aa16.33■□□□□ 0.2
RABGGTA-206ENST00000558649 TC2NQ8N9U0 490 aa16.33■□□□□ 0.2
RABGGTA-206ENST00000558649 ZBTB44Q8NCP5 570 aa16.33■□□□□ 0.2
RABGGTA-206ENST00000558649 MDGA1Q8NFP4 955 aa16.33■□□□□ 0.2
RABGGTA-206ENST00000558649 NELL1Q92832 810 aa16.33■□□□□ 0.2
RABGGTA-206ENST00000558649 ARHGEF26Q96DR7 871 aa16.33■□□□□ 0.2
RABGGTA-206ENST00000558649 LMLNQ96KR4 655 aa16.33■□□□□ 0.2
RABGGTA-206ENST00000558649 C1orf74Q96LT6 269 aa16.33■□□□□ 0.2
RABGGTA-206ENST00000558649 CCDC42Q96M95 316 aa16.33■□□□□ 0.2
RABGGTA-206ENST00000558649 NUP85Q9BW27 656 aa16.33■□□□□ 0.2
RABGGTA-206ENST00000558649 PACSIN1Q9BY11 444 aa16.33■□□□□ 0.2
RABGGTA-206ENST00000558649 OR12D3Q9UGF7 316 aa16.33■□□□□ 0.2
RABGGTA-206ENST00000558649 INTS6Q9UL03 887 aaKnown RBP16.33■□□□□ 0.2
RABGGTA-206ENST00000558649 PLA2G4CQ9UP65 541 aa16.33■□□□□ 0.2
RABGGTA-206ENST00000558649 SSU72P8A0A1W2PR75 194 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 FAM72CH0Y354 149 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 AXIN1O15169 862 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 TIMM44O43615 452 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 CLDN11O75508 207 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 ATP5BP06576 529 aaKnown RBP16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 EPHX1P07099 455 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 PRKCHP24723 683 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 MZF1P28698 734 aaPredicted RBP16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 CTSOP43234 321 aaPredicted RBP16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 CDH4P55283 916 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 STARD3Q14849 445 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 PLEKHG6Q3KR16 790 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 ACBD5Q5T8D3 534 aaPredicted RBP16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 FAM72AQ5TYM5 149 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 DAB2IPQ5VWQ8 1189 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 FAM72DQ6L9T8 149 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 CXorf57Q6NSI4 855 aaKnown RBP16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 PRR23BQ6ZRT6 265 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 WDR5BQ86VZ2 330 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 FAM72BQ86X60 149 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 ZNF683Q8IZ20 524 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 PYROXD2Q8N2H3 581 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 OR52K2Q8NGK3 314 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 NTAN1Q96AB6 310 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 BTBD6Q96KE9 485 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 GABRG3Q99928 467 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 MUC3BQ9H195 1237 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 GPATCH2LQ9NWQ4 482 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 PCSK1NQ9UHG2 260 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 ANAPC7Q9UJX3 599 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 NENFQ9UMX5 172 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 INVSQ9Y283 1065 aa16.32■□□□□ 0.2
RABGGTA-206ENST00000558649 MYO18AQ92614 2054 aaKnown RBP16.31■□□□□ 0.2
RABGGTA-206ENST00000558649 DOCK4Q8N1I0 1966 aa16.31■□□□□ 0.2
RABGGTA-206ENST00000558649 A0A1W2PQF6 199 aa16.31■□□□□ 0.2
RABGGTA-206ENST00000558649 SYNCRIPO60506 623 aaKnown RBP16.31■□□□□ 0.2
RABGGTA-206ENST00000558649 RNF8O76064 485 aa16.31■□□□□ 0.2
RABGGTA-206ENST00000558649 CYP1A2P05177 515 aa16.31■□□□□ 0.2
RABGGTA-206ENST00000558649 RHOCP08134 193 aa16.31■□□□□ 0.2
RABGGTA-206ENST00000558649 DLDP09622 509 aaKnown RBP16.31■□□□□ 0.2
RABGGTA-206ENST00000558649 HOXA6P31267 233 aa16.31■□□□□ 0.2
RABGGTA-206ENST00000558649 E2F5Q15329 346 aa16.31■□□□□ 0.2
RABGGTA-206ENST00000558649 LPAL2Q16609 132 aa16.31■□□□□ 0.2
RABGGTA-206ENST00000558649 PTPRNQ16849 979 aa16.31■□□□□ 0.2
RABGGTA-206ENST00000558649 ASTE1Q2TB18 679 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-206ENST00000558649 C5orf22Q49AR2 442 aa16.31■□□□□ 0.2
RABGGTA-206ENST00000558649 RNF219Q5W0B1 726 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-206ENST00000558649 CEP68Q76N32 757 aa16.31■□□□□ 0.2
RABGGTA-206ENST00000558649 CACUL1Q86Y37 369 aa16.31■□□□□ 0.2
RABGGTA-206ENST00000558649 CTNNBL1Q8WYA6 563 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-206ENST00000558649 NKD2Q969F2 451 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-206ENST00000558649 ZYG11BQ9C0D3 744 aa16.31■□□□□ 0.2
RABGGTA-206ENST00000558649 SLC6A17Q9H1V8 727 aa16.31■□□□□ 0.2
RABGGTA-206ENST00000558649 CTTNBP2NLQ9P2B4 639 aa16.31■□□□□ 0.2
RABGGTA-206ENST00000558649 VPS28Q9UK41 221 aa16.31■□□□□ 0.2
RABGGTA-206ENST00000558649 FZD10Q9ULW2 581 aa16.31■□□□□ 0.2
RABGGTA-206ENST00000558649 NYNRINQ9P2P1 1898 aaKnown RBP16.31■□□□□ 0.2
RABGGTA-206ENST00000558649 IGLV3-10A0A075B6K4 115 aa16.3■□□□□ 0.2
RABGGTA-206ENST00000558649 DRGXA6NNA5 263 aa16.3■□□□□ 0.2
RABGGTA-206ENST00000558649 NPC1O15118 1278 aa16.3■□□□□ 0.2
RABGGTA-206ENST00000558649 ZBTB24O43167 697 aaPredicted RBP16.3■□□□□ 0.2
RABGGTA-206ENST00000558649 CREB3O43889 395 aa16.3■□□□□ 0.2
RABGGTA-206ENST00000558649 LILRB5O75023 590 aa16.3■□□□□ 0.2
RABGGTA-206ENST00000558649 GABRG2P18507 467 aa16.3■□□□□ 0.2
RABGGTA-206ENST00000558649 OR1E1P30953 314 aa16.3■□□□□ 0.2
RABGGTA-206ENST00000558649 OXCT1P55809 520 aa16.3■□□□□ 0.2
RABGGTA-206ENST00000558649 ST8SIA6P61647 398 aa16.3■□□□□ 0.2
RABGGTA-206ENST00000558649 SCAPQ12770 1279 aa16.3■□□□□ 0.2
RABGGTA-206ENST00000558649 SPC24Q8NBT2 197 aa16.3■□□□□ 0.2
RABGGTA-206ENST00000558649 ZNF564Q8TBZ8 553 aaPredicted RBP16.3■□□□□ 0.2
RABGGTA-206ENST00000558649 FNIP1Q8TF40 1166 aa16.3■□□□□ 0.2
RABGGTA-206ENST00000558649 TTC17Q96AE7 1141 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms