RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 RHOQP17081 205 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 ECHS1P30084 290 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 VASPP50552 380 aaPredicted RBP6.96□□□□□ -1.3
LINC00517-202ENST00000554257 TUBB2AQ13885 445 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 EFHC2Q5JST6 749 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 TEX26Q8N6G2 289 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 TBC1D31Q96DN5 1066 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 TUBB2BQ9BVA1 445 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 CD248Q9HCU0 757 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 SMPD4Q9NXE4 827 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 COX16Q9P0S2 106 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 RNF14Q9UBS8 474 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 RAD54BQ9Y620 910 aa6.96□□□□□ -1.3
LINC00517-202ENST00000554257 MYO18AQ92614 2054 aaKnown RBP6.96□□□□□ -1.3
LINC00517-202ENST00000554257 HEPACAM2A8MVW5 462 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 H3BQ06 376 aaPredicted RBP6.95□□□□□ -1.3
LINC00517-202ENST00000554257 FGGP02679 453 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 FOSL2P15408 326 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 VCPP55072 806 aaKnown RBP6.95□□□□□ -1.3
LINC00517-202ENST00000554257 GDF10P55107 478 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 RPS24P62847 133 aaKnown RBP6.95□□□□□ -1.3
LINC00517-202ENST00000554257 PPIDQ08752 370 aaKnown RBP6.95□□□□□ -1.3
LINC00517-202ENST00000554257 ARHGAP15Q53QZ3 475 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 IER5LQ5T953 404 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 TTC39BQ5VTQ0 682 aaPredicted RBP6.95□□□□□ -1.3
LINC00517-202ENST00000554257 ALG1LQ6GMV1 187 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 ELMSAN1Q6PJG2 1045 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 MMGT1Q8N4V1 131 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 NOA1Q8NC60 698 aaKnown RBP6.95□□□□□ -1.3
LINC00517-202ENST00000554257 SPATA4Q8NEY3 305 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 KIF18AQ8NI77 898 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 ARHGEF2Q92974 986 aaKnown RBP6.95□□□□□ -1.3
LINC00517-202ENST00000554257 HDAC11Q96DB2 347 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 OTUB2Q96DC9 234 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 TSGA13Q96PP4 275 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 SLC39A8Q9C0K1 460 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 MPP6Q9NZW5 540 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 VANGL2Q9ULK5 521 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 LRRD1A4D1F6 860 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 PGRMC1O00264 195 aaKnown RBP6.95□□□□□ -1.3
LINC00517-202ENST00000554257 EEF2KO00418 725 aaKnown RBP6.95□□□□□ -1.3
LINC00517-202ENST00000554257 ARSAP15289 507 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 OPRD1P41143 372 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 MAPKAPK2P49137 400 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 CDH4P55283 916 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 XRCC4Q13426 336 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 KCTD19Q17RG1 926 aaPredicted RBP6.95□□□□□ -1.3
LINC00517-202ENST00000554257 NAIF1Q69YI7 327 aaPredicted RBP6.95□□□□□ -1.3
LINC00517-202ENST00000554257 SCYL2Q6P3W7 929 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 ZNF783Q6ZMS7 281 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 TMEM25Q86YD3 366 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 KCTD6Q8NC69 237 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 RIPOR3Q96MK2 946 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 ZYG11BQ9C0D3 744 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 BCLAF3A2AJT9 711 aaKnown RBP6.95□□□□□ -1.3
LINC00517-202ENST00000554257 C10orf142B7Z368 130 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 CST8O60676 142 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 ITGAVP06756 1048 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 IRF1P10914 325 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 NDST2P52849 883 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 NAP1L1P55209 391 aaKnown RBP6.95□□□□□ -1.3
LINC00517-202ENST00000554257 ZNF33AQ06730 810 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 WASHC5Q12768 1159 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 CLUL1Q15846 466 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 CCNG2Q16589 344 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 TRIM68Q6AZZ1 485 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 ADIPOR2Q86V24 386 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 NETO2Q8NC67 525 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 ATG4AQ8WYN0 398 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 MRGPRX3Q96LB0 322 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 SPHK2Q9NRA0 654 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 DNPEPQ9ULA0 475 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 DRG1Q9Y295 367 aaKnown RBP6.95□□□□□ -1.3
LINC00517-202ENST00000554257 NUMBLQ9Y6R0 609 aa6.95□□□□□ -1.3
LINC00517-202ENST00000554257 TRDMT1O14717 391 aaKnown RBP6.94□□□□□ -1.3
LINC00517-202ENST00000554257 CTIFO43310 598 aaKnown RBP6.94□□□□□ -1.3
LINC00517-202ENST00000554257 PHF2O75151 1096 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 APOEP02649 317 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 IL9P15248 144 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 GARSP41250 739 aaKnown RBP6.94□□□□□ -1.3
LINC00517-202ENST00000554257 ARF5P84085 180 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 OTUD4Q01804 1114 aaKnown RBP6.94□□□□□ -1.3
LINC00517-202ENST00000554257 TFF2Q03403 129 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 C2orf54Q08AI8 447 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 SERINC3Q13530 473 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 ARL13BQ3SXY8 428 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 FUT11Q495W5 492 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 ATAT1Q5SQI0 421 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 SND1Q7KZF4 910 aaKnown RBP eCLIP6.94□□□□□ -1.3
LINC00517-202ENST00000554257 SFTPA1Q8IWL2 248 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 LGI2Q8N0V4 545 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 CFAP52Q8N1V2 620 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 PGBD5Q8N414 524 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 ALLCQ8N6M5 410 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 FIBINQ8TAL6 211 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 RSAD2Q8WXG1 361 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 HLA-CQ95604 372 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 PHF7Q9BWX1 381 aaPredicted RBP6.94□□□□□ -1.3
LINC00517-202ENST00000554257 HEMGNQ9BXL5 484 aa6.94□□□□□ -1.3
LINC00517-202ENST00000554257 FRMD8P1Q9BZ68 369 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms