RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 CDO1Q16878 200 aa21.3■■□□□ 1
HIF1A-206ENST00000553999 RNF219Q5W0B1 726 aaPredicted RBP21.3■■□□□ 1
HIF1A-206ENST00000553999 APTXQ7Z2E3 356 aaKnown RBP21.3■■□□□ 1
HIF1A-206ENST00000553999 ZDHHC17Q8IUH5 632 aa21.3■■□□□ 1
HIF1A-206ENST00000553999 ZNF397Q8NF99 534 aaPredicted RBP21.3■■□□□ 1
HIF1A-206ENST00000553999 GANCQ8TET4 914 aa21.3■■□□□ 1
HIF1A-206ENST00000553999 PCDHB18PQ96TA0 734 aa21.3■■□□□ 1
HIF1A-206ENST00000553999 KIAA1522Q9P206 1035 aaPredicted RBP21.3■■□□□ 1
HIF1A-206ENST00000553999 USP36Q9P275 1121 aaKnown RBP21.3■■□□□ 1
HIF1A-206ENST00000553999 ERVW-1Q9UQF0 538 aa21.3■■□□□ 1
HIF1A-206ENST00000553999 DCHS1Q96JQ0 3298 aa21.3■■□□□ 1
HIF1A-206ENST00000553999 TNRC6BQ9UPQ9 1833 aaKnown RBP21.29■■□□□ 1
HIF1A-206ENST00000553999 I6L893 689 aaPredicted RBP21.29■■□□□ 1
HIF1A-206ENST00000553999 TEX33O43247 280 aa21.29■■□□□ 1
HIF1A-206ENST00000553999 SIN3BO75182 1162 aa21.29■■□□□ 1
HIF1A-206ENST00000553999 MOCS3O95396 460 aa21.29■■□□□ 1
HIF1A-206ENST00000553999 GABRB2P47870 512 aa21.29■■□□□ 1
HIF1A-206ENST00000553999 PLEKHG6Q3KR16 790 aa21.29■■□□□ 1
HIF1A-206ENST00000553999 SND1Q7KZF4 910 aaKnown RBP eCLIP21.29■■□□□ 1
HIF1A-206ENST00000553999 FAM131BQ86XD5 332 aa21.29■■□□□ 1
HIF1A-206ENST00000553999 OR52K2Q8NGK3 314 aa21.29■■□□□ 1
HIF1A-206ENST00000553999 MYO19Q96H55 970 aa21.29■■□□□ 1
HIF1A-206ENST00000553999 MRGPRX3Q96LB0 322 aa21.29■■□□□ 1
HIF1A-206ENST00000553999 NUSAP1Q9BXS6 441 aaKnown RBP21.29■■□□□ 1
HIF1A-206ENST00000553999 NAT10Q9H0A0 1025 aaKnown RBP21.29■■□□□ 1
HIF1A-206ENST00000553999 WDCPQ9H6R7 721 aa21.29■■□□□ 1
HIF1A-206ENST00000553999 ITM2CQ9NQX7 267 aa21.29■■□□□ 1
HIF1A-206ENST00000553999 SLCO3A1Q9UIG8 710 aa21.29■■□□□ 1
HIF1A-206ENST00000553999 PILRBQ9UKJ0 227 aa21.29■■□□□ 1
HIF1A-206ENST00000553999 CKAP5Q14008 2032 aa21.29■■□□□ 1
HIF1A-206ENST00000553999 SYCE3A1L190 88 aa21.28■■□□□ 1
HIF1A-206ENST00000553999 CNTN5O94779 1100 aa21.28■■□□□ 1
HIF1A-206ENST00000553999 VAV1P15498 845 aa21.28■■□□□ 1
HIF1A-206ENST00000553999 RPS14P62263 151 aaKnown RBP21.28■■□□□ 1
HIF1A-206ENST00000553999 E2F5Q15329 346 aa21.28■■□□□ 1
HIF1A-206ENST00000553999 ZNF557Q8N988 423 aaPredicted RBP21.28■■□□□ 1
HIF1A-206ENST00000553999 TTC17Q96AE7 1141 aa21.28■■□□□ 1
HIF1A-206ENST00000553999 WSB2Q9NYS7 404 aaPredicted RBP21.28■■□□□ 1
HIF1A-206ENST00000553999 A0A1B0GVM2 712 aa21.27■■□□□ 1
HIF1A-206ENST00000553999 TCAF2A6NFQ2 919 aa21.27■■□□□ 1
HIF1A-206ENST00000553999 BNIP3LO60238 219 aa21.27■■□□□ 1
HIF1A-206ENST00000553999 ASLP04424 464 aa21.27■■□□□ 1
HIF1A-206ENST00000553999 ENGP17813 658 aa21.27■■□□□ 1
HIF1A-206ENST00000553999 PSMD8P48556 350 aa21.27■■□□□ 1
HIF1A-206ENST00000553999 ECT2LQ008S8 904 aa21.27■■□□□ 1
HIF1A-206ENST00000553999 C15orf59Q2T9L4 293 aaPredicted RBP21.27■■□□□ 1
HIF1A-206ENST00000553999 ALFQ53S48 1182 aa21.27■■□□□ 1
HIF1A-206ENST00000553999 CXorf57Q6NSI4 855 aaKnown RBP21.27■■□□□ 1
HIF1A-206ENST00000553999 TFAP2DQ7Z6R9 452 aa21.27■■□□□ 1
HIF1A-206ENST00000553999 ZCCHC9Q8N567 271 aaKnown RBP21.27■■□□□ 1
HIF1A-206ENST00000553999 JOSD2Q8TAC2 188 aa21.27■■□□□ 1
HIF1A-206ENST00000553999 ERGIC2Q96RQ1 377 aa21.27■■□□□ 1
HIF1A-206ENST00000553999 IRX2Q9BZI1 471 aaPredicted RBP21.27■■□□□ 1
HIF1A-206ENST00000553999 TMEM9BQ9NQ34 198 aa21.27■■□□□ 1
HIF1A-206ENST00000553999 MPP6Q9NZW5 540 aa21.27■■□□□ 1
HIF1A-206ENST00000553999 CEP192Q8TEP8 1941 aa21.27■■□□□ 1
HIF1A-206ENST00000553999 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.26■□□□□ 0.99
HIF1A-206ENST00000553999 FAM47DPA6NHR8 397 aa21.26■□□□□ 0.99
HIF1A-206ENST00000553999 SRGAP2O75044 1071 aa21.26■□□□□ 0.99
HIF1A-206ENST00000553999 DNTTP04053 509 aa21.26■□□□□ 0.99
HIF1A-206ENST00000553999 CYP1A1P04798 512 aaPredicted RBP21.26■□□□□ 0.99
HIF1A-206ENST00000553999 ACSL1P33121 698 aa21.26■□□□□ 0.99
HIF1A-206ENST00000553999 NSFP46459 744 aaKnown RBP21.26■□□□□ 0.99
HIF1A-206ENST00000553999 CXCR3P49682 368 aa21.26■□□□□ 0.99
HIF1A-206ENST00000553999 ZNF165P49910 485 aa21.26■□□□□ 0.99
HIF1A-206ENST00000553999 ZNF177Q13360 481 aaPredicted RBP21.26■□□□□ 0.99
HIF1A-206ENST00000553999 SLC25A52Q3SY17 297 aa21.26■□□□□ 0.99
HIF1A-206ENST00000553999 SH3PXD2AQ5TCZ1 1133 aa21.26■□□□□ 0.99
HIF1A-206ENST00000553999 DCAF12L1Q5VU92 463 aa21.26■□□□□ 0.99
HIF1A-206ENST00000553999 ZNF776Q68DI1 518 aaPredicted RBP21.26■□□□□ 0.99
HIF1A-206ENST00000553999 ZNF677Q86XU0 584 aa21.26■□□□□ 0.99
HIF1A-206ENST00000553999 SUN2Q9UH99 717 aa21.26■□□□□ 0.99
HIF1A-206ENST00000553999 TMEM59LQ9UK28 342 aa21.26■□□□□ 0.99
HIF1A-206ENST00000553999 LIMK1P53667 647 aa21.25■□□□□ 0.99
HIF1A-206ENST00000553999 DUOXA1Q1HG43 343 aa21.25■□□□□ 0.99
HIF1A-206ENST00000553999 HNRNPA1L2Q32P51 320 aaKnown RBP21.25■□□□□ 0.99
HIF1A-206ENST00000553999 TTC39BQ5VTQ0 682 aaPredicted RBP21.25■□□□□ 0.99
HIF1A-206ENST00000553999 MMAAQ8IVH4 418 aaKnown RBP21.25■□□□□ 0.99
HIF1A-206ENST00000553999 STK40Q8N2I9 435 aa21.25■□□□□ 0.99
HIF1A-206ENST00000553999 RXFP2Q8WXD0 754 aa21.25■□□□□ 0.99
HIF1A-206ENST00000553999 MUC3BQ9H195 1237 aa21.25■□□□□ 0.99
HIF1A-206ENST00000553999 C6orf106Q9H6K1 298 aaPredicted RBP21.25■□□□□ 0.99
HIF1A-206ENST00000553999 ARHGEF38Q9NXL2 777 aa21.25■□□□□ 0.99
HIF1A-206ENST00000553999 RRN3Q9NYV6 651 aa21.25■□□□□ 0.99
HIF1A-206ENST00000553999 SERGEFQ9UGK8 458 aa21.25■□□□□ 0.99
HIF1A-206ENST00000553999 VPS28Q9UK41 221 aa21.25■□□□□ 0.99
HIF1A-206ENST00000553999 SLCO1B1Q9Y6L6 691 aa21.25■□□□□ 0.99
HIF1A-206ENST00000553999 ADAMTS9Q9P2N4 1935 aa21.24■□□□□ 0.99
HIF1A-206ENST00000553999 SMTNL1A8MU46 457 aa21.24■□□□□ 0.99
HIF1A-206ENST00000553999 TMCO5BA8MYB1 307 aa21.24■□□□□ 0.99
HIF1A-206ENST00000553999 CDX4O14627 284 aaPredicted RBP21.24■□□□□ 0.99
HIF1A-206ENST00000553999 GIPC1O14908 333 aa21.24■□□□□ 0.99
HIF1A-206ENST00000553999 MID1O15344 667 aa21.24■□□□□ 0.99
HIF1A-206ENST00000553999 RHOCP08134 193 aa21.24■□□□□ 0.99
HIF1A-206ENST00000553999 MMP8P22894 467 aa21.24■□□□□ 0.99
HIF1A-206ENST00000553999 RDXP35241 583 aaKnown RBP21.24■□□□□ 0.99
HIF1A-206ENST00000553999 SCNN1AP37088 669 aa21.24■□□□□ 0.99
HIF1A-206ENST00000553999 ATXN3P54252 364 aaPredicted RBP21.24■□□□□ 0.99
HIF1A-206ENST00000553999 GFPT1Q06210 699 aaPredicted RBP21.24■□□□□ 0.99
HIF1A-206ENST00000553999 CLEC16AQ2KHT3 1053 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms