RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 GAREM1Q9H706 876 aa6.73□□□□□ -1.33
FOXN3-205ENST00000553904 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.73□□□□□ -1.33
FOXN3-205ENST00000553904 FZD4Q9ULV1 537 aa6.73□□□□□ -1.33
FOXN3-205ENST00000553904 PCDHGB2Q9Y5G2 931 aa6.73□□□□□ -1.33
FOXN3-205ENST00000553904 HELZP42694 1942 aaKnown RBP6.73□□□□□ -1.33
FOXN3-205ENST00000553904 OTOGLQ3ZCN5 2332 aa6.73□□□□□ -1.33
FOXN3-205ENST00000553904 SYNJ2BP-COX16A0A087WUM0 186 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 FAM47DPA6NHR8 397 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 GIPC1O14908 333 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 FLRT2O43155 660 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 SIN3BO75182 1162 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 RNASEH2AO75792 299 aaKnown RBP6.72□□□□□ -1.33
FOXN3-205ENST00000553904 FSBPO95073 299 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 LSM8O95777 96 aaKnown RBP6.72□□□□□ -1.33
FOXN3-205ENST00000553904 CALCAP01258 141 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 IL1BP01584 269 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 CDK4P11802 303 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 CD59P13987 128 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 UCHL3P15374 230 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 CYP11B1P15538 503 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 DESP17661 470 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 ACSL1P33121 698 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 CDH5P33151 784 aaPredicted RBP6.72□□□□□ -1.33
FOXN3-205ENST00000553904 CLCN1P35523 988 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 GABRB2P47870 512 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 GRIA4P48058 902 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 CCR5P51681 352 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 SGSHP51688 502 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 GALCP54803 685 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 RACK1P63244 317 aaKnown RBP6.72□□□□□ -1.33
FOXN3-205ENST00000553904 DEUP1Q05D60 604 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 SLC20A2Q08357 652 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 GRIK2Q13002 908 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 AUHQ13825 339 aaKnown RBP6.72□□□□□ -1.33
FOXN3-205ENST00000553904 ELAVL3Q14576 367 aaKnown RBP6.72□□□□□ -1.33
FOXN3-205ENST00000553904 CST6Q15828 149 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 HLA-BQ31612 363 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 ARL13BQ3SXY8 428 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 SLC25A52Q3SY17 297 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 FSCBQ5H9T9 825 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 KLHDC7AQ5VTJ3 777 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 KIAA0895LQ68EN5 471 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 FBXL22Q6P050 247 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 GJB7Q6PEY0 223 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 TRIM72Q6ZMU5 477 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 ARCQ7LC44 396 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 SETD3Q86TU7 594 aaPredicted RBP6.72□□□□□ -1.33
FOXN3-205ENST00000553904 PRPF39Q86UA1 669 aaKnown RBP6.72□□□□□ -1.33
FOXN3-205ENST00000553904 SLC47A2Q86VL8 602 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 PASD1Q8IV76 773 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 MMAAQ8IVH4 418 aaKnown RBP6.72□□□□□ -1.33
FOXN3-205ENST00000553904 DHX40Q8IX18 779 aaKnown RBP6.72□□□□□ -1.33
FOXN3-205ENST00000553904 ZCCHC9Q8N567 271 aaKnown RBP6.72□□□□□ -1.33
FOXN3-205ENST00000553904 OR2T34Q8NGX1 318 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 RHBDD1Q8TEB9 315 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 SETD7Q8WTS6 366 aaKnown RBP6.72□□□□□ -1.33
FOXN3-205ENST00000553904 OR8D1Q8WZ84 308 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 BIRC7Q96CA5 298 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 PGAP3Q96FM1 320 aaPredicted RBP6.72□□□□□ -1.33
FOXN3-205ENST00000553904 P2RY11Q96G91 374 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 LMLNQ96KR4 655 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 SLC2A13Q96QE2 648 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 SPAG5Q96R06 1193 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 HAPLN3Q96S86 360 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 PRMT1Q99873 361 aaKnown RBP6.72□□□□□ -1.33
FOXN3-205ENST00000553904 FEM1AQ9BSK4 669 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 C2orf49Q9BVC5 232 aaPredicted RBP6.72□□□□□ -1.33
FOXN3-205ENST00000553904 ACE2Q9BYF1 805 aaPredicted RBP6.72□□□□□ -1.33
FOXN3-205ENST00000553904 NEUROG2Q9H2A3 272 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 PABPC3Q9H361 631 aaKnown RBP6.72□□□□□ -1.33
FOXN3-205ENST00000553904 ACP6Q9NPH0 428 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 PLCB1Q9NQ66 1216 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 TM7SF3Q9NS93 570 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 ANO10Q9NW15 660 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 COX16Q9P0S2 106 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 ADAMTS1Q9UHI8 967 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 CYTH4Q9UIA0 394 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 ANKRD6Q9Y2G4 727 aa6.72□□□□□ -1.33
FOXN3-205ENST00000553904 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.72□□□□□ -1.33
FOXN3-205ENST00000553904 TBC1D3DA0A087WVF3 549 aa6.71□□□□□ -1.34
FOXN3-205ENST00000553904 TBC1D3IA0A087WXS9 549 aa6.71□□□□□ -1.34
FOXN3-205ENST00000553904 TBC1D3EA0A087X179 549 aa6.71□□□□□ -1.34
FOXN3-205ENST00000553904 TBC1D3KA0A087X1G2 549 aa6.71□□□□□ -1.34
FOXN3-205ENST00000553904 A0A1W2PPC4 97 aa6.71□□□□□ -1.34
FOXN3-205ENST00000553904 ANKRD62A6NC57 917 aa6.71□□□□□ -1.34
FOXN3-205ENST00000553904 TBC1D3FA6NER0 549 aaPredicted RBP6.71□□□□□ -1.34
FOXN3-205ENST00000553904 TTC34A8MYJ7 566 aa6.71□□□□□ -1.34
FOXN3-205ENST00000553904 TBC1D3LB9A6J9 549 aa6.71□□□□□ -1.34
FOXN3-205ENST00000553904 C1QTNF3-AMACRE9PGA6 284 aa6.71□□□□□ -1.34
FOXN3-205ENST00000553904 ALOX15BO15296 676 aa6.71□□□□□ -1.34
FOXN3-205ENST00000553904 YKT6O15498 198 aa6.71□□□□□ -1.34
FOXN3-205ENST00000553904 SLC7A4O43246 635 aa6.71□□□□□ -1.34
FOXN3-205ENST00000553904 SH3BP5O60239 455 aa6.71□□□□□ -1.34
FOXN3-205ENST00000553904 PAGE1O75459 146 aa6.71□□□□□ -1.34
FOXN3-205ENST00000553904 DAB1O75553 588 aa6.71□□□□□ -1.34
FOXN3-205ENST00000553904 GRAP2O75791 330 aa6.71□□□□□ -1.34
FOXN3-205ENST00000553904 ERBB2P04626 1255 aa6.71□□□□□ -1.34
FOXN3-205ENST00000553904 PROS1P07225 676 aa6.71□□□□□ -1.34
FOXN3-205ENST00000553904 TBC1D3HP0C7X1 549 aa6.71□□□□□ -1.34
FOXN3-205ENST00000553904 ETFBP38117 255 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms