RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 ARHGAP24Q8N264 748 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 USP13Q92995 863 aaPredicted RBP14□□□□□ -0.17
PRPF40B-209ENST00000548825 TSNARE1Q96NA8 513 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 SNX15Q9NRS6 342 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 TSR3Q9UJK0 312 aaKnown RBP14□□□□□ -0.17
PRPF40B-209ENST00000548825 ZNF646O15015 1829 aaPredicted RBP14□□□□□ -0.17
PRPF40B-209ENST00000548825 DOCK1Q14185 1865 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 SMIM24O75264 130 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 CELF2O95319 508 aaKnown RBP14□□□□□ -0.17
PRPF40B-209ENST00000548825 CPA3P15088 417 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 YBX3P16989 372 aaKnown RBP eCLIP14□□□□□ -0.17
PRPF40B-209ENST00000548825 EPHA3P29320 983 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 TUBP50607 506 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 TAZQ16635 292 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 GRAMD1BQ3KR37 738 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 LRRC74BQ6ZQY2 392 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 PLEKHH3Q7Z736 793 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 DEFB107AQ8IZN7 70 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 SKA1Q96BD8 255 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 NUF2Q9BZD4 464 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 CYLDQ9NQC7 956 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 OR12D3Q9UGF7 316 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 TLK1Q9UKI8 766 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 ARID2Q68CP9 1835 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 DOCK3Q8IZD9 2030 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 CD4P01730 458 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 CHRNGP07510 517 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 CD1EP15812 388 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 POLE2P56282 527 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 MCCD1P59942 119 aaPredicted RBP13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 SLC25A52Q3SY17 297 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 RABGAP1LQ5R372 815 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 MAMDC4Q6UXC1 1216 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 IZUMO2Q6UXV1 221 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 TRIM42Q8IWZ5 723 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 PHTF2Q8N3S3 785 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 PIWIL2Q8TC59 973 aaKnown RBP13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 MAGEC3Q8TD91 643 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 CERS2Q96G23 380 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 PCED1BQ96HM7 432 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 QKIQ96PU8 341 aaKnown RBP eCLIP13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 SYT15Q9BQS2 421 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 DPPA5A6NC42 116 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 M0QZ92 97 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 ENDOD1O94919 500 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 VAPBO95292 243 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 SV2CQ496J9 727 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 CLEC20AQ6ZU45 233 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 PTAR1Q7Z6K3 402 aaPredicted RBP13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 ULK2Q8IYT8 1036 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 NPWQ8N729 165 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 ZNF781Q8N8C0 355 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 TSPYL2Q9H2G4 693 aaPredicted RBP13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 SAR1AQ9NR31 198 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 CHST12Q9NRB3 414 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 THAP1Q9NVV9 213 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 MPP6Q9NZW5 540 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 HTTP42858 3142 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 RLFQ13129 1914 aa13.99□□□□□ -0.17
PRPF40B-209ENST00000548825 XPOTO43592 962 aaKnown RBP13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 LTFP02788 710 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 MAXP61244 160 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 GEN1Q17RS7 908 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 SPDYAQ5MJ70 313 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 LPCAT4Q643R3 524 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 NRG4Q8WWG1 115 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 WNT8BQ93098 351 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 FZD10Q9ULW2 581 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 NOD1Q9Y239 953 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 SMAPO00193 183 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 TRDMT1O14717 391 aaKnown RBP13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 ENO3P13929 434 aaPredicted RBP13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 ETFBP38117 255 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 GARSP41250 739 aaKnown RBP13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 NAGLUP54802 743 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 PKNOX1P55347 436 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 HSF5Q4G112 596 aaPredicted RBP13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 KIAA0319Q5VV43 1072 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 TMEM198Q66K66 360 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 NAIF1Q69YI7 327 aaPredicted RBP13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 FSTL4Q6MZW2 842 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 LDB1Q86U70 411 aaPredicted RBP13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 HPS6Q86YV9 775 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 TEKT4Q8WW24 435 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 PTCD3Q96EY7 689 aaKnown RBP13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 ADAMTS10Q9H324 1103 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 YY1AP1Q9H869 796 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 TMEM30AQ9NV96 361 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 SLC7A8Q9UHI5 535 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 TAGLN3Q9UI15 199 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 KCNH4Q9UQ05 1017 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 OPHN1O60890 802 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 GPR32O75388 356 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 GCATO75600 419 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 ARSAP15289 507 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 PRKCHP24723 683 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 NMBRP28336 390 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 VHLP40337 213 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 FAM187BQ17R55 369 aa13.98□□□□□ -0.17
PRPF40B-209ENST00000548825 RNF220Q5VTB9 566 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms