RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 CCDC33Q8N5R6 958 aa11.78□□□□□ -0.52
DDB1-224ENST00000545894 ACTRT2Q8TDY3 377 aa11.78□□□□□ -0.52
DDB1-224ENST00000545894 PPP4R1Q8TF05 950 aa11.78□□□□□ -0.52
DDB1-224ENST00000545894 ATP2A3Q93084 1043 aa11.78□□□□□ -0.52
DDB1-224ENST00000545894 SNRNP25Q9BV90 132 aaKnown RBP11.78□□□□□ -0.52
DDB1-224ENST00000545894 CDT1Q9H211 546 aa11.78□□□□□ -0.52
DDB1-224ENST00000545894 FZD8Q9H461 694 aa11.78□□□□□ -0.52
DDB1-224ENST00000545894 C11orf49Q9H6J7 331 aa11.78□□□□□ -0.52
DDB1-224ENST00000545894 VCX3AQ9NNX9 186 aa11.78□□□□□ -0.52
DDB1-224ENST00000545894 GTF2IRD1Q9UHL9 959 aa11.78□□□□□ -0.52
DDB1-224ENST00000545894 COL1A2P08123 1366 aa11.78□□□□□ -0.52
DDB1-224ENST00000545894 C17orf102A2RUQ5 167 aa11.77□□□□□ -0.52
DDB1-224ENST00000545894 RRN3P2A6NIE6 340 aa11.77□□□□□ -0.52
DDB1-224ENST00000545894 INO80B-WBP1J3KQ70 363 aa11.77□□□□□ -0.52
DDB1-224ENST00000545894 ARVCFO00192 962 aa11.77□□□□□ -0.52
DDB1-224ENST00000545894 PROCP04070 461 aa11.77□□□□□ -0.52
DDB1-224ENST00000545894 KCNA4P22459 653 aa11.77□□□□□ -0.52
DDB1-224ENST00000545894 GRK2P25098 689 aa11.77□□□□□ -0.52
DDB1-224ENST00000545894 ATICP31939 592 aa11.77□□□□□ -0.52
DDB1-224ENST00000545894 IDH3AP50213 366 aa11.77□□□□□ -0.52
DDB1-224ENST00000545894 ATN1P54259 1190 aaPredicted RBP11.77□□□□□ -0.52
DDB1-224ENST00000545894 LRRC36Q1X8D7 754 aa11.77□□□□□ -0.52
DDB1-224ENST00000545894 LPCAT4Q643R3 524 aa11.77□□□□□ -0.52
DDB1-224ENST00000545894 STEAP4Q687X5 459 aa11.77□□□□□ -0.52
DDB1-224ENST00000545894 SLC39A5Q6ZMH5 540 aa11.77□□□□□ -0.52
DDB1-224ENST00000545894 TMEM130Q8N3G9 435 aa11.77□□□□□ -0.52
DDB1-224ENST00000545894 CMTM5Q96DZ9 223 aa11.77□□□□□ -0.52
DDB1-224ENST00000545894 INO80BQ9C086 356 aaPredicted RBP11.77□□□□□ -0.52
DDB1-224ENST00000545894 NRDE2Q9H7Z3 1164 aa11.77□□□□□ -0.52
DDB1-224ENST00000545894 DCDC2Q9UHG0 476 aa11.77□□□□□ -0.52
DDB1-224ENST00000545894 CDH22Q9UJ99 828 aa11.77□□□□□ -0.52
DDB1-224ENST00000545894 ADAMTS6Q9UKP5 1117 aa11.77□□□□□ -0.52
DDB1-224ENST00000545894 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.77□□□□□ -0.53
DDB1-224ENST00000545894 IGKV6-21A0A0C4DH24 114 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 ZNF487B1APH4 448 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 TPP1O14773 563 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 MDM4O15151 490 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 TREHO43280 583 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 OPHN1O60890 802 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 PDE5AO76074 875 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 ALDH1A2O94788 518 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 C22orf31O95567 290 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 ALDOAP04075 364 aaKnown RBP11.77□□□□□ -0.53
DDB1-224ENST00000545894 DESP17661 470 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 CYP3A5P20815 502 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 CYP2F1P24903 491 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 SDC4P31431 198 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 GRIA1P42261 906 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 MSLNQ13421 630 aaPredicted RBP11.77□□□□□ -0.53
DDB1-224ENST00000545894 SEMA5AQ13591 1074 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 PDE1CQ14123 709 aaPredicted RBP11.77□□□□□ -0.53
DDB1-224ENST00000545894 PCLAFQ15004 111 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 PDCD2Q16342 344 aaPredicted RBP11.77□□□□□ -0.53
DDB1-224ENST00000545894 PPP6R3Q5H9R7 873 aaPredicted RBP11.77□□□□□ -0.53
DDB1-224ENST00000545894 PDPK2PQ6A1A2 396 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 JADE1Q6IE81 842 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 LCLAT1Q6UWP7 414 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 PACS1Q6VY07 963 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 MAVSQ7Z434 540 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 UBE2Q1Q7Z7E8 422 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 EXOC8Q8IYI6 725 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 GDPD5Q8WTR4 605 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 CDKL2Q92772 493 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 NLRP4Q96MN2 994 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 VRTNQ9H8Y1 702 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 TSPAN16Q9UKR8 245 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 BARX2Q9UMQ3 279 aaPredicted RBP11.77□□□□□ -0.53
DDB1-224ENST00000545894 TNFSF13BQ9Y275 285 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 COMMD3-BMI1R4GMX3 469 aa11.77□□□□□ -0.53
DDB1-224ENST00000545894 CCDC85CA6NKD9 419 aa11.76□□□□□ -0.53
DDB1-224ENST00000545894 LACTBL1A8MY62 500 aa11.76□□□□□ -0.53
DDB1-224ENST00000545894 ALOX15P16050 662 aaPredicted RBP11.76□□□□□ -0.53
DDB1-224ENST00000545894 VCLP18206 1134 aa11.76□□□□□ -0.53
DDB1-224ENST00000545894 NDST1P52848 882 aa11.76□□□□□ -0.53
DDB1-224ENST00000545894 RPL26P61254 145 aaKnown RBP11.76□□□□□ -0.53
DDB1-224ENST00000545894 NIPAL4Q0D2K0 466 aa11.76□□□□□ -0.53
DDB1-224ENST00000545894 GRM2Q14416 872 aa11.76□□□□□ -0.53
DDB1-224ENST00000545894 NECAB2Q7Z6G3 386 aa11.76□□□□□ -0.53
DDB1-224ENST00000545894 SDCCAG8Q86SQ7 713 aaPredicted RBP11.76□□□□□ -0.53
DDB1-224ENST00000545894 RSPH3Q86UC2 560 aa11.76□□□□□ -0.53
DDB1-224ENST00000545894 UNC5BQ8IZJ1 945 aa11.76□□□□□ -0.53
DDB1-224ENST00000545894 NME8Q8N427 588 aa11.76□□□□□ -0.53
DDB1-224ENST00000545894 CXorf38Q8TB03 319 aa11.76□□□□□ -0.53
DDB1-224ENST00000545894 CCDC124Q96CT7 223 aaKnown RBP11.76□□□□□ -0.53
DDB1-224ENST00000545894 ZNF668Q96K58 619 aaPredicted RBP11.76□□□□□ -0.53
DDB1-224ENST00000545894 SORT1Q99523 831 aa11.76□□□□□ -0.53
DDB1-224ENST00000545894 TRMT13Q9NUP7 481 aaKnown RBP11.76□□□□□ -0.53
DDB1-224ENST00000545894 PNPOQ9NVS9 261 aa11.76□□□□□ -0.53
DDB1-224ENST00000545894 KIAA1257Q9ULG3 409 aa11.76□□□□□ -0.53
DDB1-224ENST00000545894 SCN10AQ9Y5Y9 1956 aa11.76□□□□□ -0.53
DDB1-224ENST00000545894 SF3B1O75533 1304 aaKnown RBP eCLIP11.76□□□□□ -0.53
DDB1-224ENST00000545894 WDR27A2RRH5 827 aa11.76□□□□□ -0.53
DDB1-224ENST00000545894 MBLAC1A4D2B0 266 aaPredicted RBP11.76□□□□□ -0.53
DDB1-224ENST00000545894 PFKMP08237 780 aa11.76□□□□□ -0.53
DDB1-224ENST00000545894 PABPC4LP0CB38 370 aaKnown RBP11.76□□□□□ -0.53
DDB1-224ENST00000545894 ZFXP17010 805 aaPredicted RBP11.76□□□□□ -0.53
DDB1-224ENST00000545894 PEX2P28328 305 aa11.76□□□□□ -0.53
DDB1-224ENST00000545894 RGS7P49802 495 aa11.76□□□□□ -0.53
DDB1-224ENST00000545894 AQP4P55087 323 aa11.76□□□□□ -0.53
DDB1-224ENST00000545894 GBE1Q04446 702 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms