RNA–Protein interactions for RNA: ENST00000544216.7

LSM14A-203, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LSM14A, Length 3,596 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-203ENST00000544216 LRIG2O94898 1065 aa14.23□□□□□ -0.13
LSM14A-203ENST00000544216 TGDSO95455 350 aa14.23□□□□□ -0.13
LSM14A-203ENST00000544216 MLNP12872 115 aa14.23□□□□□ -0.13
LSM14A-203ENST00000544216 NFKB1P19838 968 aa14.23□□□□□ -0.13
LSM14A-203ENST00000544216 CDC25CP30307 473 aa14.23□□□□□ -0.13
LSM14A-203ENST00000544216 NUMBP49757 651 aa14.23□□□□□ -0.13
LSM14A-203ENST00000544216 NAA25Q14CX7 972 aa14.23□□□□□ -0.13
LSM14A-203ENST00000544216 RINLQ6ZS11 566 aa14.23□□□□□ -0.13
LSM14A-203ENST00000544216 METTL23Q86XA0 190 aa14.23□□□□□ -0.13
LSM14A-203ENST00000544216 PSTKQ8IV42 348 aaKnown RBP14.23□□□□□ -0.13
LSM14A-203ENST00000544216 CERS2Q96G23 380 aa14.23□□□□□ -0.13
LSM14A-203ENST00000544216 SMARCD1Q96GM5 515 aa14.23□□□□□ -0.13
LSM14A-203ENST00000544216 EBF4Q9BQW3 602 aa14.23□□□□□ -0.13
LSM14A-203ENST00000544216 BTBD10Q9BSF8 475 aa14.23□□□□□ -0.13
LSM14A-203ENST00000544216 CAB39LQ9H9S4 337 aa14.23□□□□□ -0.13
LSM14A-203ENST00000544216 DNAJC16Q9Y2G8 782 aa14.23□□□□□ -0.13
LSM14A-203ENST00000544216 ARHGAP42A6NI28 874 aa14.23□□□□□ -0.13
LSM14A-203ENST00000544216 ITM2AO43736 263 aa14.23□□□□□ -0.13
LSM14A-203ENST00000544216 GM2AP17900 193 aa14.23□□□□□ -0.13
LSM14A-203ENST00000544216 CLNS1AP54105 237 aaKnown RBP14.23□□□□□ -0.13
LSM14A-203ENST00000544216 CCDC6Q16204 474 aa14.23□□□□□ -0.13
LSM14A-203ENST00000544216 TRIM68Q6AZZ1 485 aa14.23□□□□□ -0.13
LSM14A-203ENST00000544216 LIMS2Q7Z4I7 341 aa14.23□□□□□ -0.13
LSM14A-203ENST00000544216 TMEM209Q96SK2 561 aa14.23□□□□□ -0.13
LSM14A-203ENST00000544216 APBA2Q99767 749 aa14.23□□□□□ -0.13
LSM14A-203ENST00000544216 MTG1Q9BT17 334 aaPredicted RBP14.23□□□□□ -0.13
LSM14A-203ENST00000544216 SPC25Q9HBM1 224 aa14.23□□□□□ -0.13
LSM14A-203ENST00000544216 ACSS2Q9NR19 701 aa14.23□□□□□ -0.13
LSM14A-203ENST00000544216 C15orf41Q9Y2V0 281 aa14.23□□□□□ -0.13
LSM14A-203ENST00000544216 BRCA2P51587 3418 aa14.22□□□□□ -0.13
LSM14A-203ENST00000544216 NEBLO76041 1014 aa14.22□□□□□ -0.13
LSM14A-203ENST00000544216 PGGT1BP53609 377 aa14.22□□□□□ -0.13
LSM14A-203ENST00000544216 PAFAH1B3Q15102 231 aaKnown RBP14.22□□□□□ -0.13
LSM14A-203ENST00000544216 SCN4BQ8IWT1 228 aa14.22□□□□□ -0.13
LSM14A-203ENST00000544216 TMEM86AQ8N2M4 240 aa14.22□□□□□ -0.13
LSM14A-203ENST00000544216 CHRAC1Q9NRG0 131 aa14.22□□□□□ -0.13
LSM14A-203ENST00000544216 C20orf96Q9NUD7 363 aaPredicted RBP14.22□□□□□ -0.13
LSM14A-203ENST00000544216 SIRPGQ9P1W8 387 aa14.22□□□□□ -0.13
LSM14A-203ENST00000544216 ZSWIM8A7E2V4 1837 aa14.22□□□□□ -0.13
LSM14A-203ENST00000544216 F8W810 466 aa14.22□□□□□ -0.13
LSM14A-203ENST00000544216 CCNFP41002 786 aa14.22□□□□□ -0.13
LSM14A-203ENST00000544216 ZBTB17Q13105 803 aa14.22□□□□□ -0.13
LSM14A-203ENST00000544216 DLG2Q15700 870 aa14.22□□□□□ -0.13
LSM14A-203ENST00000544216 OTOP3Q7RTS5 596 aa14.22□□□□□ -0.13
LSM14A-203ENST00000544216 SKA1Q96BD8 255 aa14.22□□□□□ -0.13
LSM14A-203ENST00000544216 SHCBP1LQ9BZQ2 653 aa14.22□□□□□ -0.13
LSM14A-203ENST00000544216 WWP1Q9H0M0 922 aa14.22□□□□□ -0.13
LSM14A-203ENST00000544216 LRRC40Q9H9A6 602 aa14.22□□□□□ -0.13
LSM14A-203ENST00000544216 CDH9Q9ULB4 789 aa14.22□□□□□ -0.13
LSM14A-203ENST00000544216 PADI3Q9ULW8 664 aa14.22□□□□□ -0.13
LSM14A-203ENST00000544216 CACNB2Q08289 660 aaPredicted RBP14.22□□□□□ -0.13
LSM14A-203ENST00000544216 TAC4Q86UU9 113 aa14.22□□□□□ -0.13
LSM14A-203ENST00000544216 C10orf107Q8IVU9 208 aa14.22□□□□□ -0.13
LSM14A-203ENST00000544216 DTX3LQ8TDB6 740 aa14.22□□□□□ -0.13
LSM14A-203ENST00000544216 TAS2R1Q9NYW7 299 aa14.22□□□□□ -0.13
LSM14A-203ENST00000544216 TMEM216Q9P0N5 145 aa14.22□□□□□ -0.13
LSM14A-203ENST00000544216 CPSF2Q9P2I0 782 aaKnown RBP14.22□□□□□ -0.13
LSM14A-203ENST00000544216 GTF2IRD1Q9UHL9 959 aa14.22□□□□□ -0.13
LSM14A-203ENST00000544216 MCM8Q9UJA3 840 aa14.22□□□□□ -0.13
LSM14A-203ENST00000544216 GARSP41250 739 aaKnown RBP14.21□□□□□ -0.13
LSM14A-203ENST00000544216 OCRLQ01968 901 aa14.21□□□□□ -0.13
LSM14A-203ENST00000544216 PAXIP1Q6ZW49 1069 aaPredicted RBP14.21□□□□□ -0.13
LSM14A-203ENST00000544216 MARK2Q7KZI7 788 aaKnown RBP14.21□□□□□ -0.13
LSM14A-203ENST00000544216 WDR75Q8IWA0 830 aaKnown RBP14.21□□□□□ -0.13
LSM14A-203ENST00000544216 DCLK2Q8N568 766 aa14.21□□□□□ -0.13
LSM14A-203ENST00000544216 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.21□□□□□ -0.13
LSM14A-203ENST00000544216 TRPV1Q8NER1 839 aa14.21□□□□□ -0.13
LSM14A-203ENST00000544216 C7orf26Q96N11 449 aa14.21□□□□□ -0.13
LSM14A-203ENST00000544216 NAT9Q9BTE0 207 aa14.21□□□□□ -0.13
LSM14A-203ENST00000544216 KCNK4Q9NYG8 393 aa14.21□□□□□ -0.13
LSM14A-203ENST00000544216 SFMBT1Q9UHJ3 866 aa14.21□□□□□ -0.13
LSM14A-203ENST00000544216 GSC2O15499 205 aa14.21□□□□□ -0.13
LSM14A-203ENST00000544216 MSI1O43347 362 aaKnown RBP14.21□□□□□ -0.13
LSM14A-203ENST00000544216 GLRA3O75311 464 aa14.21□□□□□ -0.13
LSM14A-203ENST00000544216 MX2P20592 715 aa14.21□□□□□ -0.13
LSM14A-203ENST00000544216 CALB2P22676 271 aa14.21□□□□□ -0.13
LSM14A-203ENST00000544216 CNTFP26441 200 aa14.21□□□□□ -0.13
LSM14A-203ENST00000544216 PGM1P36871 562 aa14.21□□□□□ -0.13
LSM14A-203ENST00000544216 GP5P40197 560 aa14.21□□□□□ -0.13
LSM14A-203ENST00000544216 ITGA9Q13797 1035 aa14.21□□□□□ -0.13
LSM14A-203ENST00000544216 UBAP2LQ14157 1087 aaKnown RBP14.21□□□□□ -0.13
LSM14A-203ENST00000544216 RAPH1Q70E73 1250 aa14.21□□□□□ -0.13
LSM14A-203ENST00000544216 CCNJLQ8IV13 435 aa14.21□□□□□ -0.13
LSM14A-203ENST00000544216 TSPAN18Q96SJ8 248 aa14.21□□□□□ -0.13
LSM14A-203ENST00000544216 ADAM2Q99965 735 aa14.21□□□□□ -0.13
LSM14A-203ENST00000544216 TUBB6Q9BUF5 446 aa14.21□□□□□ -0.13
LSM14A-203ENST00000544216 RNPEPL1Q9HAU8 725 aa14.21□□□□□ -0.13
LSM14A-203ENST00000544216 IARS2Q9NSE4 1012 aaKnown RBP14.21□□□□□ -0.13
LSM14A-203ENST00000544216 TMLHEQ9NVH6 421 aa14.21□□□□□ -0.13
LSM14A-203ENST00000544216 THAP1Q9NVV9 213 aa14.21□□□□□ -0.13
LSM14A-203ENST00000544216 KLF11O14901 512 aa14.21□□□□□ -0.14
LSM14A-203ENST00000544216 GPR182O15218 404 aa14.21□□□□□ -0.14
LSM14A-203ENST00000544216 OR4Q2P0C623 313 aa14.21□□□□□ -0.14
LSM14A-203ENST00000544216 ODC1P11926 461 aa14.21□□□□□ -0.14
LSM14A-203ENST00000544216 GRIK1P39086 918 aa14.21□□□□□ -0.14
LSM14A-203ENST00000544216 SLC1A6P48664 564 aa14.21□□□□□ -0.14
LSM14A-203ENST00000544216 NIPAL4Q0D2K0 466 aa14.21□□□□□ -0.14
LSM14A-203ENST00000544216 STEAP4Q687X5 459 aa14.21□□□□□ -0.14
LSM14A-203ENST00000544216 TREML1Q86YW5 311 aa14.21□□□□□ -0.14
LSM14A-203ENST00000544216 SPATA22Q8NHS9 363 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms