RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 ITM2CQ9NQX7 267 aa10.06□□□□□ -0.8
TNFRSF1A-214ENST00000543048 DLL3Q9NYJ7 618 aa10.06□□□□□ -0.8
TNFRSF1A-214ENST00000543048 CALCOCO1Q9P1Z2 691 aa10.06□□□□□ -0.8
TNFRSF1A-214ENST00000543048 STAP1Q9ULZ2 295 aa10.06□□□□□ -0.8
TNFRSF1A-214ENST00000543048 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.06□□□□□ -0.8
TNFRSF1A-214ENST00000543048 DCHS1Q96JQ0 3298 aa10.06□□□□□ -0.8
TNFRSF1A-214ENST00000543048 KNL1Q8NG31 2342 aa10.06□□□□□ -0.8
TNFRSF1A-214ENST00000543048 ASCC3Q8N3C0 2202 aaKnown RBP10.06□□□□□ -0.8
TNFRSF1A-214ENST00000543048 CACNA1EQ15878 2313 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 SYCE3A1L190 88 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 GOLGA8SH3BPF8 625 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 AP5Z1O43299 807 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 NDUFS2O75306 463 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 ASLP04424 464 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 CCDC172P0C7W6 258 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 HLA-EP13747 358 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 PRKCHP24723 683 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 OXTRP30559 389 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 CSKP41240 450 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 DPP6P42658 865 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 ATXN1P54253 815 aaKnown RBP10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 OXCT1P55809 520 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 RPL6Q02878 288 aaKnown RBP10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 DEUP1Q05D60 604 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 CAMK2GQ13555 558 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 SLC12A1Q13621 1099 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 CDH18Q13634 790 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 AUHQ13825 339 aaKnown RBP10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 IQCB1Q15051 598 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 SF3A2Q15428 464 aaKnown RBP10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 PTPRNQ16849 979 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 SLC25A52Q3SY17 297 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 FSCBQ5H9T9 825 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 BRMS1LQ5PSV4 323 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 RABGAP1LQ5R372 815 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 ACBD5Q5T8D3 534 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 TTC39BQ5VTQ0 682 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 FBXL22Q6P050 247 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 THSD4Q6ZMP0 1018 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 ARCQ7LC44 396 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 CYP2U1Q7Z449 544 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 NETO1Q8TDF5 533 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 PIGKQ92643 395 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 PRCCQ92733 491 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 SIPA1Q96FS4 1042 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 PRICKLE1Q96MT3 831 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 PPP1R9BQ96SB3 815 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 PCDHB18PQ96TA0 734 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 AGPAT1Q99943 283 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 FUCA2Q9BTY2 467 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 SIK2Q9H0K1 926 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 SLC6A17Q9H1V8 727 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 TMEM245Q9H330 911 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 PIGVQ9NUD9 493 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 TMEM59LQ9UK28 342 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 CDV3Q9UKY7 258 aaKnown RBP10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 INTS6Q9UL03 887 aaKnown RBP10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 CYP8B1Q9UNU6 501 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 PAXBP1Q9Y5B6 917 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 DOCK9Q9BZ29 2069 aa10.05□□□□□ -0.8
TNFRSF1A-214ENST00000543048 IGHV1OR15-9A0A0B4J2B8 117 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 FAM170AA1A519 330 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 KHNYNO15037 678 aaKnown RBP10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 GDF9O60383 454 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 PAGE1O75459 146 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 ADCY5O95622 1261 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 SRPRAP08240 638 aaKnown RBP10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 ACADMP11310 421 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 UNGP13051 313 aaPredicted RBP10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 FERP16591 822 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 MMP8P22894 467 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 SULT1E1P49888 294 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 PLK1P53350 603 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 COPAP53621 1224 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 ST8SIA6P61647 398 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 ECT2LQ008S8 904 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 C5orf22Q49AR2 442 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 AASDHQ4L235 1098 aaPredicted RBP10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 C2CD6Q53TS8 623 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 PITRM1Q5JRX3 1037 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 MMS22LQ6ZRQ5 1243 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 ERMP1Q7Z2K6 904 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 DGLUCYQ7Z3D6 616 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 IRF2BP2Q7Z5L9 587 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 CCAR2Q8N163 923 aaKnown RBP10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 DEFB119Q8N690 84 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 KDM1BQ8NB78 822 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 TTC13Q8NBP0 860 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 OR2T3Q8NH03 318 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 SLC30A5Q8TAD4 765 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 IGSF8Q969P0 613 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 ZNF419Q96HQ0 510 aaPredicted RBP10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 C1orf74Q96LT6 269 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 RPRD1AQ96P16 312 aaPredicted RBP10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 TBCBQ99426 244 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 RTKNQ9BST9 563 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 NUP58Q9BVL2 599 aa10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 MKRN2Q9H000 416 aaKnown RBP10.04□□□□□ -0.8
TNFRSF1A-214ENST00000543048 TKTL2Q9H0I9 626 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms