RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 CCDC187A0A096LP49 1063 aa14.42□□□□□ -0.1
NKX3-1-202ENST00000523261 K7ESM1 405 aa14.42□□□□□ -0.1
NKX3-1-202ENST00000523261 C5AR1P21730 350 aa14.42□□□□□ -0.1
NKX3-1-202ENST00000523261 SLC5A2P31639 672 aa14.42□□□□□ -0.1
NKX3-1-202ENST00000523261 DRD3P35462 400 aa14.42□□□□□ -0.1
NKX3-1-202ENST00000523261 SGSHP51688 502 aa14.42□□□□□ -0.1
NKX3-1-202ENST00000523261 RIPPLY3P57055 190 aa14.42□□□□□ -0.1
NKX3-1-202ENST00000523261 ST8SIA6P61647 398 aa14.42□□□□□ -0.1
NKX3-1-202ENST00000523261 KCNMA1Q12791 1236 aa14.42□□□□□ -0.1
NKX3-1-202ENST00000523261 TRIP4Q15650 581 aaPredicted RBP14.42□□□□□ -0.1
NKX3-1-202ENST00000523261 SNRNP35Q16560 246 aaKnown RBP14.42□□□□□ -0.1
NKX3-1-202ENST00000523261 ZNF667Q5HYK9 610 aa14.42□□□□□ -0.1
NKX3-1-202ENST00000523261 RDH13Q8NBN7 331 aa14.42□□□□□ -0.1
NKX3-1-202ENST00000523261 TTC17Q96AE7 1141 aa14.42□□□□□ -0.1
NKX3-1-202ENST00000523261 ELMO3Q96BJ8 720 aa14.42□□□□□ -0.1
NKX3-1-202ENST00000523261 CCDC127Q96BQ5 260 aa14.42□□□□□ -0.1
NKX3-1-202ENST00000523261 PLD4Q96BZ4 506 aa14.42□□□□□ -0.1
NKX3-1-202ENST00000523261 FUCA2Q9BTY2 467 aa14.42□□□□□ -0.1
NKX3-1-202ENST00000523261 STRIP2Q9ULQ0 834 aa14.42□□□□□ -0.1
NKX3-1-202ENST00000523261 PCDHGA7Q9Y5G6 932 aa14.42□□□□□ -0.1
NKX3-1-202ENST00000523261 PCDHGA4Q9Y5G9 962 aa14.42□□□□□ -0.1
NKX3-1-202ENST00000523261 UBE4BO95155 1302 aa14.41□□□□□ -0.1
NKX3-1-202ENST00000523261 TARSL2A2RTX5 802 aaKnown RBP14.41□□□□□ -0.1
NKX3-1-202ENST00000523261 PRAMEF26H0Y7S4 382 aa14.41□□□□□ -0.1
NKX3-1-202ENST00000523261 SCAMP1O15126 338 aa14.41□□□□□ -0.1
NKX3-1-202ENST00000523261 ADH1BP00325 375 aa14.41□□□□□ -0.1
NKX3-1-202ENST00000523261 LONP1P36776 959 aaKnown RBP14.41□□□□□ -0.1
NKX3-1-202ENST00000523261 CASRP41180 1078 aa14.41□□□□□ -0.1
NKX3-1-202ENST00000523261 NDST1P52848 882 aa14.41□□□□□ -0.1
NKX3-1-202ENST00000523261 PDX1P52945 283 aa14.41□□□□□ -0.1
NKX3-1-202ENST00000523261 ZNF445P59923 1031 aa14.41□□□□□ -0.1
NKX3-1-202ENST00000523261 CYP24A1Q07973 514 aa14.41□□□□□ -0.1
NKX3-1-202ENST00000523261 ZNF699Q32M78 642 aa14.41□□□□□ -0.1
NKX3-1-202ENST00000523261 POM121L1PQ3SYA9 428 aa14.41□□□□□ -0.1
NKX3-1-202ENST00000523261 GUSBP11Q6P575 273 aa14.41□□□□□ -0.1
NKX3-1-202ENST00000523261 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.41□□□□□ -0.1
NKX3-1-202ENST00000523261 EFL1Q7Z2Z2 1120 aaKnown RBP14.41□□□□□ -0.1
NKX3-1-202ENST00000523261 C14orf80Q86SX3 495 aa14.41□□□□□ -0.1
NKX3-1-202ENST00000523261 HTR3CQ8WXA8 447 aa14.41□□□□□ -0.1
NKX3-1-202ENST00000523261 FAM131CQ96AQ9 280 aa14.41□□□□□ -0.1
NKX3-1-202ENST00000523261 LMLNQ96KR4 655 aa14.41□□□□□ -0.1
NKX3-1-202ENST00000523261 DUSP23Q9BVJ7 150 aa14.41□□□□□ -0.1
NKX3-1-202ENST00000523261 STOML2Q9UJZ1 356 aa14.41□□□□□ -0.1
NKX3-1-202ENST00000523261 ACSL6Q9UKU0 697 aa14.41□□□□□ -0.1
NKX3-1-202ENST00000523261 ZFC3H1O60293 1989 aaKnown RBP14.41□□□□□ -0.1
NKX3-1-202ENST00000523261 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.4□□□□□ -0.1
NKX3-1-202ENST00000523261 FRMD3A2A2Y4 597 aa14.4□□□□□ -0.1
NKX3-1-202ENST00000523261 CPED1A4D0V7 1026 aa14.4□□□□□ -0.1
NKX3-1-202ENST00000523261 NEMP2A6NFY4 417 aa14.4□□□□□ -0.1
NKX3-1-202ENST00000523261 TTC34A8MYJ7 566 aa14.4□□□□□ -0.1
NKX3-1-202ENST00000523261 TCEA3O75764 348 aa14.4□□□□□ -0.1
NKX3-1-202ENST00000523261 NEBLO76041 1014 aa14.4□□□□□ -0.1
NKX3-1-202ENST00000523261 CYP4F2P78329 520 aa14.4□□□□□ -0.1
NKX3-1-202ENST00000523261 ZNF177Q13360 481 aaPredicted RBP14.4□□□□□ -0.1
NKX3-1-202ENST00000523261 MORC3Q14149 939 aa14.4□□□□□ -0.1
NKX3-1-202ENST00000523261 CDKN3Q16667 212 aa14.4□□□□□ -0.1
NKX3-1-202ENST00000523261 RSRC2Q7L4I2 434 aaKnown RBP14.4□□□□□ -0.1
NKX3-1-202ENST00000523261 TRIM69Q86WT6 500 aa14.4□□□□□ -0.1
NKX3-1-202ENST00000523261 KDM1BQ8NB78 822 aa14.4□□□□□ -0.1
NKX3-1-202ENST00000523261 TMEM145Q8NBT3 493 aa14.4□□□□□ -0.1
NKX3-1-202ENST00000523261 TPCN2Q8NHX9 752 aa14.4□□□□□ -0.1
NKX3-1-202ENST00000523261 ADNPQ9H2P0 1102 aa14.4□□□□□ -0.1
NKX3-1-202ENST00000523261 KDM4CQ9H3R0 1056 aa14.4□□□□□ -0.1
NKX3-1-202ENST00000523261 INTS6Q9UL03 887 aaKnown RBP14.4□□□□□ -0.1
NKX3-1-202ENST00000523261 LIMCH1Q9UPQ0 1083 aa14.4□□□□□ -0.1
NKX3-1-202ENST00000523261 EDDM13A0A1B0GTR0 161 aa14.39□□□□□ -0.11
NKX3-1-202ENST00000523261 CASC3O15234 703 aaKnown RBP14.39□□□□□ -0.11
NKX3-1-202ENST00000523261 PLRG1O43660 514 aaKnown RBP14.39□□□□□ -0.11
NKX3-1-202ENST00000523261 PHACTR2O75167 634 aa14.39□□□□□ -0.11
NKX3-1-202ENST00000523261 RTN2O75298 545 aa14.39□□□□□ -0.11
NKX3-1-202ENST00000523261 ASLP04424 464 aa14.39□□□□□ -0.11
NKX3-1-202ENST00000523261 IDEP14735 1019 aa14.39□□□□□ -0.11
NKX3-1-202ENST00000523261 WT1P19544 449 aaPredicted RBP14.39□□□□□ -0.11
NKX3-1-202ENST00000523261 MZF1P28698 734 aaPredicted RBP14.39□□□□□ -0.11
NKX3-1-202ENST00000523261 HOXD13P35453 343 aa14.39□□□□□ -0.11
NKX3-1-202ENST00000523261 CSKP41240 450 aa14.39□□□□□ -0.11
NKX3-1-202ENST00000523261 METAP1P53582 386 aa14.39□□□□□ -0.11
NKX3-1-202ENST00000523261 NCAPHQ15003 741 aa14.39□□□□□ -0.11
NKX3-1-202ENST00000523261 SETMARQ53H47 684 aaPredicted RBP14.39□□□□□ -0.11
NKX3-1-202ENST00000523261 ADGRF1Q5T601 910 aa14.39□□□□□ -0.11
NKX3-1-202ENST00000523261 MCTP1Q6DN14 999 aa14.39□□□□□ -0.11
NKX3-1-202ENST00000523261 ZCCHC8Q6NZY4 707 aaKnown RBP14.39□□□□□ -0.11
NKX3-1-202ENST00000523261 CRTC1Q6UUV9 634 aa14.39□□□□□ -0.11
NKX3-1-202ENST00000523261 UNC93AQ86WB7 457 aa14.39□□□□□ -0.11
NKX3-1-202ENST00000523261 STK40Q8N2I9 435 aa14.39□□□□□ -0.11
NKX3-1-202ENST00000523261 CYFIP2Q96F07 1278 aa14.39□□□□□ -0.11
NKX3-1-202ENST00000523261 STK17AQ9UEE5 414 aa14.39□□□□□ -0.11
NKX3-1-202ENST00000523261 ITIH6Q6UXX5 1313 aa14.39□□□□□ -0.11
NKX3-1-202ENST00000523261 PLD2O14939 933 aa14.38□□□□□ -0.11
NKX3-1-202ENST00000523261 RNGTTO60942 597 aaKnown RBP14.38□□□□□ -0.11
NKX3-1-202ENST00000523261 IL1BP01584 269 aa14.38□□□□□ -0.11
NKX3-1-202ENST00000523261 SLFN14P0C7P3 912 aa14.38□□□□□ -0.11
NKX3-1-202ENST00000523261 LIPCP11150 499 aa14.38□□□□□ -0.11
NKX3-1-202ENST00000523261 PERM1Q5SV97 790 aa14.38□□□□□ -0.11
NKX3-1-202ENST00000523261 VASH2Q86V25 355 aa14.38□□□□□ -0.11
NKX3-1-202ENST00000523261 TWNKQ96RR1 684 aa14.38□□□□□ -0.11
NKX3-1-202ENST00000523261 MYOCQ99972 504 aa14.38□□□□□ -0.11
NKX3-1-202ENST00000523261 ANAPC2Q9UJX6 822 aa14.38□□□□□ -0.11
NKX3-1-202ENST00000523261 ERVW-1Q9UQF0 538 aa14.38□□□□□ -0.11
NKX3-1-202ENST00000523261 PLAAQ9Y263 795 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms