RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 QRICH1Q2TAL8 776 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 MDH1BQ5I0G3 518 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 KCTD16Q68DU8 428 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 GTF2IRD2BQ6EKJ0 949 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 CXCL17Q6UXB2 119 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 LRIG3Q6UXM1 1119 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 DTHD1Q6ZMT9 781 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 ZNF574Q6ZN55 896 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-216ENST00000523088 UTS2BQ765I0 119 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 GTF2IRD2Q86UP8 949 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 LRRC6Q86X45 466 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 NUP93Q8N1F7 819 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 DPP10Q8N608 796 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 FAM71DQ8N9W8 422 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 TMIEQ8NEW7 156 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 SLC24A4Q8NFF2 622 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 CLHC1Q8NHS4 586 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 PLEKHO2Q8TD55 490 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 EMID1Q96A84 441 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-216ENST00000523088 TIFAQ96CG3 184 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 STAMBPL1Q96FJ0 436 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 UCN2Q96RP3 112 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 RIT2Q99578 217 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 TXN2Q99757 166 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 CCM2Q9BSQ5 444 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 EMILIN2Q9BXX0 1053 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 ZCCHC2Q9C0B9 1178 aaKnown RBP7.73□□□□□ -1.17
HDAC3-216ENST00000523088 ABCG8Q9H221 673 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 TMEM245Q9H330 911 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 GHITMQ9H3K2 345 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 HIPK3Q9H422 1215 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 MVB12BQ9H7P6 319 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 CDHR5Q9HBB8 845 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 RC3H2Q9HBD1 1191 aaKnown RBP7.73□□□□□ -1.17
HDAC3-216ENST00000523088 MOV10Q9HCE1 1003 aaKnown RBP7.73□□□□□ -1.17
HDAC3-216ENST00000523088 INTS9Q9NV88 658 aaKnown RBP7.73□□□□□ -1.17
HDAC3-216ENST00000523088 KLHL11Q9NVR0 708 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 DACT1Q9NYF0 836 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 RRN3Q9NYV6 651 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 TRPS1Q9UHF7 1281 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 ADAMTS1Q9UHI8 967 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 VAV3Q9UKW4 847 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 DMTF1Q9Y222 760 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 RUVBL1Q9Y265 456 aaKnown RBP7.73□□□□□ -1.17
HDAC3-216ENST00000523088 STK38LQ9Y2H1 464 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 PCDHGA11Q9Y5H2 935 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 GRIN2DO15399 1336 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-216ENST00000523088 VWA3AA6NCI4 1184 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 OR5K3A6NET4 321 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 ZSCAN5CA6NGD5 496 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-216ENST00000523088 ZSCAN5BA6NJL1 495 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 PPP1R3GB7ZBB8 358 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 PITPNM1O00562 1244 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 TREHO43280 583 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 TRAPPC3O43617 180 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 BUB1O43683 1085 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 MAN1A2O60476 641 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 SORBS3O60504 671 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 SOAT2O75908 522 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 PRPF6O94906 941 aaKnown RBP7.72□□□□□ -1.17
HDAC3-216ENST00000523088 GH1P01241 217 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 CYP21A2P08686 494 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 TXNP10599 105 aaKnown RBP7.72□□□□□ -1.17
HDAC3-216ENST00000523088 CLUP10909 449 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 KRT5P13647 590 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 GJA1P17302 382 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 GSTM2P28161 218 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 BMI1P35226 326 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 RAP1GDS1P52306 607 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 P2RX3P56373 397 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 COPS2P61201 443 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 ECT2LQ008S8 904 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 SSRP1Q08945 709 aaKnown RBP7.72□□□□□ -1.17
HDAC3-216ENST00000523088 CLN3Q13286 438 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 BFSP2Q13515 415 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 RAPSNQ13702 412 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 GRM4Q14833 912 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 ARHGAP19Q14CB8 494 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 EFTUD2Q15029 972 aaKnown RBP eCLIP7.72□□□□□ -1.174e-7■■■■■ 33.4
HDAC3-216ENST00000523088 RAB30Q15771 203 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 RBM20Q5T481 1227 aaKnown RBP7.72□□□□□ -1.17
HDAC3-216ENST00000523088 ARHGEF16Q5VV41 709 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 KIAA0319Q5VV43 1072 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 ALS2CLQ60I27 953 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 ANO7Q6IWH7 933 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 CXorf57Q6NSI4 855 aaKnown RBP7.72□□□□□ -1.17
HDAC3-216ENST00000523088 TMC5Q6UXY8 1006 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 TPGS1Q6ZTW0 290 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 SH3RF1Q7Z6J0 888 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 SLFN11Q7Z7L1 901 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 CDH24Q86UP0 819 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 HEATR4Q86WZ0 1026 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 IFT20Q8IY31 132 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 CCDC36Q8IYA8 594 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 PYROXD2Q8N2H3 581 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 LHFPL5Q8TAF8 219 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 TSPEARQ8WU66 669 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 POF1BQ8WVV4 589 aa7.72□□□□□ -1.17
HDAC3-216ENST00000523088 SLC44A1Q8WWI5 657 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms