RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 XPNPEP3Q9NQH7 507 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 VSX1Q9NZR4 365 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 RGS17Q9UGC6 210 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 CCNL1Q9UK58 526 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 NDRG4Q9ULP0 352 aaKnown RBP4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 SATB2Q9UPW6 733 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 PRELID1Q9Y255 219 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 MYO3AQ8NEV4 1616 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 DCCP43146 1447 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 CPSF1Q10570 1443 aaKnown RBP4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 PTPRUQ92729 1446 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 NPHP3Q7Z494 1330 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 TTC21BQ7Z4L5 1316 aa4.97□□□□□ -1.61
HMGB3P13-201ENST00000511263 KIF24Q5T7B8 1368 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 DISP3Q9P2K9 1392 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 WDR27A2RRH5 827 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 TRIM43BA6NCK2 446 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 AQP7P3A6NL99 342 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 ADM5C9JUS6 153 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 PYCARD-AS1I3L0S3 204 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 CHL1O00533 1208 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 DCLK1O15075 740 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 TBX3O15119 743 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 PPM1DO15297 605 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 BIRC5O15392 142 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 P4HA2O15460 535 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 TUBBP07437 444 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 CD53P19397 219 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 IL4RP24394 825 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 TCF7P36402 384 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 PIK3CAP42336 1068 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 ZNF134P52741 427 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 TPTEP56180 551 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 DRP2Q13474 957 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 KCTD2Q14681 263 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 ELF2Q15723 593 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 SNCBQ16143 134 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 WHAMMP3Q1A5X7 153 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 CCDC14Q49A88 953 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 PLA1AQ53H76 456 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 CERCAMQ5T4B2 595 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 VPS53Q5VIR6 699 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 SUMO4Q6EEV6 95 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 NEK10Q6ZWH5 1172 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 B4GALNT4Q76KP1 1039 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 RD3Q7Z3Z2 195 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 ITPRIPQ8IWB1 547 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 BRSK2Q8IWQ3 736 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 LRRC43Q8N309 656 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 RP9Q8TA86 221 aaKnown RBP4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 SUN5Q8TC36 379 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 TRPC4APQ8TEL6 797 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 DYDC1Q8WWB3 177 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 TRIM43Q96BQ3 446 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 SLC39A13Q96H72 371 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 ZNF668Q96K58 619 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 CTAGE1Q96RT6 745 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 DPCDQ9BVM2 203 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 MOV10L1Q9BXT6 1211 aaKnown RBP4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 UNKQ9C0B0 810 aaKnown RBP4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 FAM83DQ9H4H8 585 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 ZWILCHQ9H900 591 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 AS3MTQ9HBK9 375 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 PAPOLBQ9NRJ5 636 aaKnown RBP4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 SERTAD4Q9NUC0 356 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 MIS18AQ9NYP9 233 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 SERTAD3Q9UJW9 196 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 ADAM21Q9UKJ8 722 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 HDAC9Q9UKV0 1011 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 ZNF510Q9Y2H8 683 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 SNX13Q9Y5W8 968 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 WNT6Q9Y6F9 365 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 SIGLEC1Q9BZZ2 1709 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 SPATA31A6Q5VVP1 1343 aa4.96□□□□□ -1.62
HMGB3P13-201ENST00000511263 UBR1Q8IWV7 1749 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 TMEM94Q12767 1356 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 TRPM1Q7Z4N2 1603 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 EIF3FO00303 357 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 RNF8O76064 485 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 CAVIN2O95810 425 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 KRT18P05783 430 aaKnown RBP4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 PARP1P09874 1014 aaKnown RBP4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 EBLN1P0CF75 366 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 HSPA1AP0DMV8 641 aaKnown RBP4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 HSPA1BP0DMV9 641 aaKnown RBP4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 TGFB3P10600 412 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 CASTP20810 708 aaKnown RBP4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 PPP2R1AP30153 589 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 PDE1AP54750 535 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 AKAP17AQ02040 695 aaKnown RBP4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 MYO1EQ12965 1108 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 CCNIQ14094 377 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 BOP1Q14137 746 aaKnown RBP4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 SLC29A2Q14542 456 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 AARS2Q5JTZ9 985 aaKnown RBP4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 CFAP58Q5T655 872 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 TSTD2Q5T7W7 516 aa4.95□□□□□ -1.62
HMGB3P13-201ENST00000511263 CEP85Q6P2H3 762 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms