RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 FOXL2P58012 376 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 RPS3AP61247 264 aaKnown RBP4.92□□□□□ -1.62
VPS13A-211ENST00000484581 ITIH3Q06033 890 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 TDGQ13569 410 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 DNASE1L3Q13609 305 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 RUNDC3AQ59EK9 446 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 ZNF766Q5HY98 468 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 SPECC1Q5M775 1068 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 ZNF618Q5T7W0 954 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 KRT74Q7RTS7 529 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 MAVSQ7Z434 540 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 ADGRG6Q86SQ4 1221 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 NKAIN3Q8N8D7 197 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 TNIP2Q8NFZ5 429 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 OR52L2PQ8NGH6 319 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 USP6NLQ92738 828 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 FUBP1Q96AE4 644 aaKnown RBP4.92□□□□□ -1.62
VPS13A-211ENST00000484581 CTHRC1Q96CG8 243 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 TRMT61AQ96FX7 289 aaKnown RBP4.92□□□□□ -1.62
VPS13A-211ENST00000484581 RANBP17Q9H2T7 1088 aaKnown RBP4.92□□□□□ -1.62
VPS13A-211ENST00000484581 KCND2Q9NZV8 630 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 NFKBIL1Q9UBC1 381 aaPredicted RBP4.92□□□□□ -1.62
VPS13A-211ENST00000484581 SH2B3Q9UQQ2 575 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 OSGIN2Q9Y236 505 aa4.92□□□□□ -1.62
VPS13A-211ENST00000484581 COPG1Q9Y678 874 aaKnown RBP4.92□□□□□ -1.62
VPS13A-211ENST00000484581 CYP3A7-CYP3A51PA0A087WV96 503 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 hCG_1807616A0A1W2PRN6 198 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 P4HA2O15460 535 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 PMPCBO75439 489 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 TSPAN9O75954 239 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 CDKL5O76039 1030 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 ONECUT2O95948 504 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 DNTTP04053 509 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 CYP3A7P24462 503 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 TM4SF1P30408 202 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 CLCN2P51788 898 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 CDH15P55291 814 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 NXPH1P58417 271 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 NLRP5P59047 1200 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 SUMO2P61956 95 aaKnown RBP4.91□□□□□ -1.62
VPS13A-211ENST00000484581 TXNL4AP83876 142 aaKnown RBP4.91□□□□□ -1.62
VPS13A-211ENST00000484581 MC1RQ01726 317 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 CREB5Q02930 508 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 CHAF1BQ13112 559 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 EIF2B5Q13144 721 aaKnown RBP4.91□□□□□ -1.62
VPS13A-211ENST00000484581 TBCCQ15814 346 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 ALDH1L2Q3SY69 923 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 CCDC105Q8IYK2 499 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 GPATCH11Q8N954 259 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 CLEC4CQ8WTT0 213 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 NOC3LQ8WTT2 800 aaKnown RBP4.91□□□□□ -1.62
VPS13A-211ENST00000484581 RUFY2Q8WXA3 655 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 R3HDM4Q96D70 268 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 FAM120BQ96EK7 910 aaKnown RBP4.91□□□□□ -1.62
VPS13A-211ENST00000484581 MYEOVQ96EZ4 313 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 TTC14Q96N46 770 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 SLF1Q9BQI6 1058 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 CDCP1Q9H5V8 836 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 SAP30LQ9HAJ7 183 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 SEPT11Q9NVA2 429 aaKnown RBP4.91□□□□□ -1.62
VPS13A-211ENST00000484581 THAP1Q9NVV9 213 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 GABRQQ9UN88 632 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 SNX8Q9Y5X2 465 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 LYVE1Q9Y5Y7 322 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 PASKQ96RG2 1323 aa4.91□□□□□ -1.62
VPS13A-211ENST00000484581 CENPVL1A0A0U1RR11 272 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 GRID2IPA4D2P6 1211 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 AGAP14A8MT82 685 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 MASP2O00187 686 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 TMPRSS11DO60235 418 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 FESP07332 822 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 CREB1P16220 341 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 ZNF37AP17032 561 aaPredicted RBP4.9□□□□□ -1.63
VPS13A-211ENST00000484581 IGFBP2P18065 325 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 FBLP22087 321 aaKnown RBP4.9□□□□□ -1.63
VPS13A-211ENST00000484581 ABCD1P33897 745 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 HNRNPMP52272 730 aaKnown RBP eCLIP4.9□□□□□ -1.63
VPS13A-211ENST00000484581 CDK18Q07002 472 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 DCTN2Q13561 401 aaKnown RBP4.9□□□□□ -1.63
VPS13A-211ENST00000484581 BECN1Q14457 450 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 CYP1B1Q16678 543 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 BEAN1Q3B7T3 259 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 CCDC184Q52MB2 194 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 SLC30A6Q6NXT4 461 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 TMEM88Q6PEY1 159 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 MTHFD1LQ6UB35 978 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 OLFML1Q6UWY5 402 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 KIAA1324Q6UXG2 1013 aaKnown RBP4.9□□□□□ -1.63
VPS13A-211ENST00000484581 SZRD1Q7Z422 152 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 LCORLQ8N3X6 602 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 PNPLA1Q8N8W4 532 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 BEND2Q8NDZ0 799 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 TBC1D5Q92609 795 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 KIF1BPQ96EK5 621 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 SAAL1Q96ER3 474 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 RNFT2Q96EX2 444 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 PRR25Q96S07 402 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 EYA3Q99504 573 aa4.9□□□□□ -1.63
VPS13A-211ENST00000484581 CINPQ9BW66 212 aaPredicted RBP4.9□□□□□ -1.63
VPS13A-211ENST00000484581 TTYH1Q9H313 450 aaPredicted RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms