RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 VAMP2P63027 116 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 CFHR1Q03591 330 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 PKP1Q13835 747 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 KPNB1Q14974 876 aaKnown RBP2.56□□□□□ -2
ITGB1-213ENST00000484088 CNGA3Q16281 694 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 CTXN3Q4LDR2 81 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 KIAA1755Q5JYT7 1200 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 DENND2CQ68D51 928 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 FCRLBQ6BAA4 426 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 TBC1D3GQ6DHY5 549 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 TBC1D3CQ6IPX1 549 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 NAPEPLDQ6IQ20 393 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 ANO7Q6IWH7 933 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 MTFR2Q6P444 385 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 RANBP10Q6VN20 620 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 RHPN2Q8IUC4 686 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 SCN4BQ8IWT1 228 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 TBC1D3Q8IZP1 549 aaPredicted RBP2.56□□□□□ -2
ITGB1-213ENST00000484088 PAQR4Q8N4S7 273 aaPredicted RBP2.56□□□□□ -2
ITGB1-213ENST00000484088 USP38Q8NB14 1042 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 FAM110DQ8TAY7 271 aaPredicted RBP2.56□□□□□ -2
ITGB1-213ENST00000484088 C2CD4CQ8TF44 421 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 ZFPM2Q8WW38 1151 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 GOLGA1Q92805 767 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 CELF1Q92879 486 aaKnown RBP2.56□□□□□ -2
ITGB1-213ENST00000484088 ZBTB10Q96DT7 871 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 PPM1MQ96MI6 270 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 EIF3CQ99613 913 aaKnown RBP2.56□□□□□ -2
ITGB1-213ENST00000484088 LBHD1Q9BQE6 289 aaPredicted RBP2.56□□□□□ -2
ITGB1-213ENST00000484088 HTATIP2Q9BUP3 242 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 ADGRE3Q9BY15 652 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 PDE11AQ9HCR9 933 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 UBN1Q9NPG3 1134 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 TMLHEQ9NVH6 421 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 ZDHHC7Q9NXF8 308 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 HSF4Q9ULV5 492 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 AFG3L2Q9Y4W6 797 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 WNT6Q9Y6F9 365 aa2.56□□□□□ -2
ITGB1-213ENST00000484088 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.55□□□□□ -2
ITGB1-213ENST00000484088 SLC22A23A1A5C7 686 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 SAC3D1A6NKF1 404 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 PRRT4C9JH25 899 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 J3KRW8 73 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 TP73O15350 636 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 KLK10O43240 276 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 ORC4O43929 436 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 SGPL1O95470 568 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 ALDOAP04075 364 aaKnown RBP2.55□□□□□ -2
ITGB1-213ENST00000484088 RBM5P52756 815 aaKnown RBP eCLIP2.55□□□□□ -2
ITGB1-213ENST00000484088 YPEL5P62699 121 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 RHAGQ02094 409 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 RNASELQ05823 741 aaKnown RBP2.55□□□□□ -2
ITGB1-213ENST00000484088 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.55□□□□□ -2
ITGB1-213ENST00000484088 SLC12A1Q13621 1099 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 CBFBQ13951 182 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 PGM5Q15124 567 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 DLGAP5Q15398 846 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 ZNF569Q5MCW4 686 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 WDR45BQ5MNZ6 344 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 MEX3CQ5U5Q3 659 aaKnown RBP2.55□□□□□ -2
ITGB1-213ENST00000484088 PRAMEF17Q5VTA0 474 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 JAKMIP3Q5VZ66 844 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 ATG16L1Q676U5 607 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 RETSATQ6NUM9 610 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 DENND1BQ6P3S1 775 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 TMEM65Q6PI78 240 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 SYNE3Q6ZMZ3 975 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 RBM44Q6ZP01 1051 aaKnown RBP2.55□□□□□ -2
ITGB1-213ENST00000484088 RNF144BQ7Z419 303 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 FSIP1Q8NA03 581 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 NAXEQ8NCW5 288 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 NGDNQ8NEJ9 315 aaKnown RBP2.55□□□□□ -2
ITGB1-213ENST00000484088 SEMA6DQ8NFY4 1073 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 KAT2AQ92830 837 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 MAP4K1Q92918 833 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 ELP4Q96EB1 424 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 RNFT2Q96EX2 444 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 PPP1R10Q96QC0 940 aaKnown RBP2.55□□□□□ -2
ITGB1-213ENST00000484088 FYTTD1Q96QD9 318 aaKnown RBP2.55□□□□□ -2
ITGB1-213ENST00000484088 FCRL5Q96RD9 977 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 GPR63Q9BZJ6 419 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 CLPBQ9H078 707 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 NUAK2Q9H093 628 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 LMAN2LQ9H0V9 348 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 OSBPL5Q9H0X9 879 aaPredicted RBP2.55□□□□□ -2
ITGB1-213ENST00000484088 STN1Q9H668 368 aaKnown RBP2.55□□□□□ -2
ITGB1-213ENST00000484088 Q9N2J8 555 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 THAP1Q9NVV9 213 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 TMEM248Q9NWD8 314 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 KLQ9UEF7 1012 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 DTX4Q9Y2E6 619 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 TMEM98Q9Y2Y6 226 aa2.55□□□□□ -2
ITGB1-213ENST00000484088 RRP7AQ9Y3A4 280 aaKnown RBP2.55□□□□□ -2
ITGB1-213ENST00000484088 A0A0G2JK05 382 aa2.54□□□□□ -2
ITGB1-213ENST00000484088 A6NLC8 198 aa2.54□□□□□ -2
ITGB1-213ENST00000484088 KCNJ18B7U540 433 aa2.54□□□□□ -2
ITGB1-213ENST00000484088 MCIDASD6RGH6 385 aa2.54□□□□□ -2
ITGB1-213ENST00000484088 SMIM22K7EJ46 135 aa2.54□□□□□ -2
ITGB1-213ENST00000484088 DSCR3O14972 297 aa2.54□□□□□ -2
ITGB1-213ENST00000484088 NPHP1O15259 732 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms