RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 PRRC2BQ5JSZ5 2229 aaKnown RBP6.39□□□□□ -1.39
CLK1-210ENST00000473565 TMEM120BA0PK00 339 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 RASA4BC9J798 803 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 RASA4O43374 803 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 CDH16O75309 829 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 BRAFP15056 766 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 KRT15P19012 456 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 MGAT1P26572 445 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 HCAR3P49019 387 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 PPIDQ08752 370 aaKnown RBP6.39□□□□□ -1.39
CLK1-210ENST00000473565 PLD1Q13393 1074 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 SEMA5AQ13591 1074 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 PPP2R5DQ14738 602 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 MS4A13Q5J8X5 152 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 BRMS1LQ5PSV4 323 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 MANEALQ5VSG8 457 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 SLC8B1Q6J4K2 584 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 BZW1Q7L1Q6 419 aaKnown RBP6.39□□□□□ -1.39
CLK1-210ENST00000473565 BEND5Q7L4P6 421 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 SPRED2Q7Z698 418 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 CTAGE3PQ8IX95 158 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 RNF168Q8IYW5 571 aaPredicted RBP6.39□□□□□ -1.39
CLK1-210ENST00000473565 CFAP52Q8N1V2 620 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 ARFGAP2Q8N6H7 521 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 CNTD1Q8N815 330 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 SPATA22Q8NHS9 363 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 GDAP1Q8TB36 358 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 MAML1Q92585 1016 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 ZNF689Q96CS4 500 aaPredicted RBP6.39□□□□□ -1.39
CLK1-210ENST00000473565 TBC1D31Q96DN5 1066 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 SIGLEC10Q96LC7 697 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 ZNF512Q96ME7 567 aaPredicted RBP6.39□□□□□ -1.39
CLK1-210ENST00000473565 YME1L1Q96TA2 773 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 CCDC77Q9BR77 488 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 MLPHQ9BV36 600 aaPredicted RBP6.39□□□□□ -1.39
CLK1-210ENST00000473565 TLR8Q9NR97 1041 aaKnown RBP6.39□□□□□ -1.39
CLK1-210ENST00000473565 SMYD2Q9NRG4 433 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 GKN1Q9NS71 199 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 IL37Q9NZH6 218 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 TLR6Q9Y2C9 796 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 DOCK4Q8N1I0 1966 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 KIAA1671Q9BY89 1806 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 FAM92AA1XBS5 289 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 TTC24A2A3L6 582 aaPredicted RBP6.38□□□□□ -1.39
CLK1-210ENST00000473565 TRANK1O15050 2925 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 STK10O94804 968 aaKnown RBP6.38□□□□□ -1.39
CLK1-210ENST00000473565 PARNO95453 639 aaKnown RBP6.38□□□□□ -1.39
CLK1-210ENST00000473565 CPP00450 1065 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 SOD2P04179 222 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 IVLP07476 585 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 IRF1P10914 325 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 EN2P19622 333 aaPredicted RBP6.38□□□□□ -1.39
CLK1-210ENST00000473565 MLLT6P55198 1093 aaPredicted RBP6.38□□□□□ -1.39
CLK1-210ENST00000473565 ZSCAN26Q16670 478 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 EMC10Q5UCC4 262 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 MSANTD2Q6P1R3 559 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 RFWD3Q6PCD5 774 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 UNC5AQ6ZN44 842 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 CEP128Q6ZU80 1094 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 KDELC2Q7Z4H8 507 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 NECAB2Q7Z6G3 386 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 TAX1BP1Q86VP1 789 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 OR52K1Q8NGK4 314 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 WBP2Q969T9 261 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 HAPLN3Q96S86 360 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 PRMT1Q99873 361 aaKnown RBP6.38□□□□□ -1.39
CLK1-210ENST00000473565 TRIM62Q9BVG3 475 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 ACSS3Q9H6R3 686 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 NOL6Q9H6R4 1146 aaKnown RBP6.38□□□□□ -1.39
CLK1-210ENST00000473565 RSPH14Q9UHP6 348 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 ABHD14A-ACY1A0A1B0GW23 586 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 OPHN1O60890 802 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 TCEA3O75764 348 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 RTN3O95197 1032 aaPredicted RBP6.38□□□□□ -1.39
CLK1-210ENST00000473565 MT-CYBP00156 380 aaPredicted RBP6.38□□□□□ -1.39
CLK1-210ENST00000473565 TPH1P17752 444 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 TPSB2P20231 275 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 SERPINB6P35237 376 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 MAGEA6P43360 314 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 CCT5P48643 541 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 RPL10AP62906 217 aaKnown RBP6.38□□□□□ -1.39
CLK1-210ENST00000473565 TPSAB1Q15661 275 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 QPCTQ16769 361 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 NADSYN1Q6IA69 706 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 FBXL22Q6P050 247 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 PDZD4Q76G19 769 aaPredicted RBP6.38□□□□□ -1.39
CLK1-210ENST00000473565 ZNF354CQ86Y25 554 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 ATPAF2Q8N5M1 289 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 PPM1NQ8N819 430 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 ATXN2LQ8WWM7 1075 aaKnown RBP6.38□□□□□ -1.39
CLK1-210ENST00000473565 HDAC11Q96DB2 347 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 OXNAD1Q96HP4 312 aaPredicted RBP6.38□□□□□ -1.39
CLK1-210ENST00000473565 NACA2Q9H009 215 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 SYBUQ9NX95 663 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 SMPD4Q9NXE4 827 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 LGALS13Q9UHV8 139 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 YIPF1Q9Y548 306 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 SZT2Q5T011 3432 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 LCHNA4D1U4 455 aa6.38□□□□□ -1.39
CLK1-210ENST00000473565 C2orf78A6NCI8 922 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms