RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 ANKRD62A6NC57 917 aa13.3□□□□□ -0.28
COL5A1-206ENST00000465877 RTN2O75298 545 aa13.3□□□□□ -0.28
COL5A1-206ENST00000465877 SERPING1P05155 500 aa13.3□□□□□ -0.28
COL5A1-206ENST00000465877 PLEKP08567 350 aaPredicted RBP13.3□□□□□ -0.28
COL5A1-206ENST00000465877 DLDP09622 509 aaKnown RBP13.3□□□□□ -0.28
COL5A1-206ENST00000465877 GZMAP12544 262 aa13.3□□□□□ -0.28
COL5A1-206ENST00000465877 HDAC4P56524 1084 aa13.3□□□□□ -0.28
COL5A1-206ENST00000465877 RPL7AP62424 266 aaKnown RBP13.3□□□□□ -0.28
COL5A1-206ENST00000465877 PLEKHG6Q3KR16 790 aa13.3□□□□□ -0.28
COL5A1-206ENST00000465877 ACBD5Q5T8D3 534 aaPredicted RBP13.3□□□□□ -0.28
COL5A1-206ENST00000465877 DCUN1D2Q6PH85 259 aa13.3□□□□□ -0.28
COL5A1-206ENST00000465877 VPS36Q86VN1 386 aa13.3□□□□□ -0.28
COL5A1-206ENST00000465877 VSTM4Q8IW00 320 aa13.3□□□□□ -0.28
COL5A1-206ENST00000465877 ZNF683Q8IZ20 524 aa13.3□□□□□ -0.28
COL5A1-206ENST00000465877 PGBD3Q8N328 593 aa13.3□□□□□ -0.28
COL5A1-206ENST00000465877 RUBCNQ92622 972 aa13.3□□□□□ -0.28
COL5A1-206ENST00000465877 CENPIQ92674 756 aaPredicted RBP13.3□□□□□ -0.28
COL5A1-206ENST00000465877 ZNF653Q96CK0 615 aa13.3□□□□□ -0.28
COL5A1-206ENST00000465877 SPACA7Q96KW9 195 aa13.3□□□□□ -0.28
COL5A1-206ENST00000465877 KIAA1522Q9P206 1035 aaPredicted RBP13.3□□□□□ -0.28
COL5A1-206ENST00000465877 GMEB2Q9UKD1 530 aa13.3□□□□□ -0.28
COL5A1-206ENST00000465877 BZW2Q9Y6E2 419 aaKnown RBP13.3□□□□□ -0.28
COL5A1-206ENST00000465877 DCHS1Q96JQ0 3298 aa13.3□□□□□ -0.28
COL5A1-206ENST00000465877 IGLV3-10A0A075B6K4 115 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 E9PAM4 449 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 DCLK1O15075 740 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 TIMM44O43615 452 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 CLDN11O75508 207 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 CNTN5O94779 1100 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 MOCS3O95396 460 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 ASLP04424 464 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 ATP5BP06576 529 aaKnown RBP13.29□□□□□ -0.28
COL5A1-206ENST00000465877 EPHX1P07099 455 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 HLA-EP13747 358 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 ZNF143P52747 638 aaPredicted RBP13.29□□□□□ -0.28
COL5A1-206ENST00000465877 CDH4P55283 916 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 ARL13BQ3SXY8 428 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 USP39Q53GS9 565 aaKnown RBP13.29□□□□□ -0.28
COL5A1-206ENST00000465877 PLEKHA7Q6IQ23 1121 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 SARM1Q6SZW1 724 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 LRRC31Q6UY01 552 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 KBTBD6Q86V97 674 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 C11orf74Q86VG3 221 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 CACUL1Q86Y37 369 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 ABCA7Q8IZY2 2146 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 FAM160A2Q8N612 972 aaPredicted RBP13.29□□□□□ -0.28
COL5A1-206ENST00000465877 CCDC185Q8N715 623 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 ZNF366Q8N895 744 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 NTAN1Q96AB6 310 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 TTC17Q96AE7 1141 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 TRIM11Q96F44 468 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 MYO19Q96H55 970 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 HAPLN3Q96S86 360 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 SLC6A17Q9H1V8 727 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 PARVAQ9NVD7 372 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 ARHGAP20Q9P2F6 1191 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 SCINQ9Y6U3 715 aa13.29□□□□□ -0.28
COL5A1-206ENST00000465877 SYNCRIPO60506 623 aaKnown RBP13.28□□□□□ -0.28
COL5A1-206ENST00000465877 MFAP3LO75121 409 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 FTLP02792 175 aaPredicted RBP13.28□□□□□ -0.28
COL5A1-206ENST00000465877 MYBL1P10243 752 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 DESP17661 470 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 BCKDHBP21953 392 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 MZF1P28698 734 aaPredicted RBP13.28□□□□□ -0.28
COL5A1-206ENST00000465877 P2RY2P41231 377 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 NUMBP49757 651 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 COPAP53621 1224 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 OGDHQ02218 1023 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 ZNF252P-AS1Q0IIN9 211 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 SCAPQ12770 1279 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 MAMLD1Q13495 774 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 SLC12A1Q13621 1099 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 ELF2Q15723 593 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 ALFQ53S48 1182 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 MANEALQ5VSG8 457 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 PMS2CLQ68D20 193 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 KIAA1324Q6UXG2 1013 aaKnown RBP13.28□□□□□ -0.28
COL5A1-206ENST00000465877 TMC6Q7Z403 805 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 TFAP2DQ7Z6R9 452 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 APCDD1Q8J025 514 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 OR52K2Q8NGK3 314 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 MRGPRX3Q96LB0 322 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 MRGPRX1Q96LB2 322 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 C1orf74Q96LT6 269 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 DNAJC7Q99615 494 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 CNPY3Q9BT09 278 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.28□□□□□ -0.28
COL5A1-206ENST00000465877 MKRN2Q9H000 416 aaKnown RBP13.28□□□□□ -0.28
COL5A1-206ENST00000465877 ISCUQ9H1K1 167 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 TMEM245Q9H330 911 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 CD93Q9NPY3 652 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 CNOT8Q9UFF9 292 aaKnown RBP13.28□□□□□ -0.28
COL5A1-206ENST00000465877 ADAMTS1Q9UHI8 967 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 PLA2G4CQ9UP65 541 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 NEU3Q9UQ49 428 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 INVSQ9Y283 1065 aa13.28□□□□□ -0.28
COL5A1-206ENST00000465877 A0A087X0T9 212 aa13.27□□□□□ -0.29
COL5A1-206ENST00000465877 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.27□□□□□ -0.29
COL5A1-206ENST00000465877 ZBTB24O43167 697 aaPredicted RBP13.27□□□□□ -0.29
COL5A1-206ENST00000465877 SRGAP2O75044 1071 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms