RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 SYCP2LQ5T4T6 812 aa19.53■□□□□ 0.72
COL5A1-203ENST00000460264 NAA35Q5VZE5 725 aa19.53■□□□□ 0.72
COL5A1-203ENST00000460264 ZNF677Q86XU0 584 aa19.53■□□□□ 0.72
COL5A1-203ENST00000460264 APCDD1Q8J025 514 aa19.53■□□□□ 0.72
COL5A1-203ENST00000460264 KDM1BQ8NB78 822 aa19.53■□□□□ 0.72
COL5A1-203ENST00000460264 MSANTD4Q8NCY6 345 aa19.53■□□□□ 0.72
COL5A1-203ENST00000460264 ANKRD20A12PQ8NF67 263 aa19.53■□□□□ 0.72
COL5A1-203ENST00000460264 CADM4Q8NFZ8 388 aa19.53■□□□□ 0.72
COL5A1-203ENST00000460264 NT5C3BQ969T7 300 aa19.53■□□□□ 0.72
COL5A1-203ENST00000460264 NUP58Q9BVL2 599 aa19.53■□□□□ 0.72
COL5A1-203ENST00000460264 MTG2Q9H4K7 406 aa19.53■□□□□ 0.72
COL5A1-203ENST00000460264 NLRC4Q9NPP4 1024 aa19.53■□□□□ 0.72
COL5A1-203ENST00000460264 SUN2Q9UH99 717 aa19.53■□□□□ 0.72
COL5A1-203ENST00000460264 STAP1Q9ULZ2 295 aa19.53■□□□□ 0.72
COL5A1-203ENST00000460264 ERVW-1Q9UQF0 538 aa19.53■□□□□ 0.72
COL5A1-203ENST00000460264 DAAM1Q9Y4D1 1078 aa19.53■□□□□ 0.72
COL5A1-203ENST00000460264 HS3ST4Q9Y661 456 aa19.53■□□□□ 0.72
COL5A1-203ENST00000460264 MEI4A8MW99 385 aa19.52■□□□□ 0.72
COL5A1-203ENST00000460264 PAGE1O75459 146 aa19.52■□□□□ 0.72
COL5A1-203ENST00000460264 SRPRAP08240 638 aaKnown RBP19.52■□□□□ 0.72
COL5A1-203ENST00000460264 SOX5P35711 763 aa19.52■□□□□ 0.72
COL5A1-203ENST00000460264 GGCXP38435 758 aa19.52■□□□□ 0.72
COL5A1-203ENST00000460264 CXCR3P49682 368 aa19.52■□□□□ 0.72
COL5A1-203ENST00000460264 SULT1E1P49888 294 aa19.52■□□□□ 0.72
COL5A1-203ENST00000460264 IRAK1P51617 712 aa19.52■□□□□ 0.72
COL5A1-203ENST00000460264 ZBTB16Q05516 673 aa19.52■□□□□ 0.72
COL5A1-203ENST00000460264 GFPT1Q06210 699 aaPredicted RBP19.52■□□□□ 0.72
COL5A1-203ENST00000460264 TYRO3Q06418 890 aa19.52■□□□□ 0.72
COL5A1-203ENST00000460264 SLC12A1Q13621 1099 aa19.52■□□□□ 0.72
COL5A1-203ENST00000460264 SYCP1Q15431 976 aa19.52■□□□□ 0.72
COL5A1-203ENST00000460264 WDR45BQ5MNZ6 344 aa19.52■□□□□ 0.72
COL5A1-203ENST00000460264 BRMS1LQ5PSV4 323 aa19.52■□□□□ 0.72
COL5A1-203ENST00000460264 ZNF776Q68DI1 518 aaPredicted RBP19.52■□□□□ 0.72
COL5A1-203ENST00000460264 CXorf57Q6NSI4 855 aaKnown RBP19.52■□□□□ 0.72
COL5A1-203ENST00000460264 FAM124AQ86V42 546 aa19.52■□□□□ 0.72
COL5A1-203ENST00000460264 RGL4Q8IZJ4 473 aa19.52■□□□□ 0.72
COL5A1-203ENST00000460264 CPA5Q8WXQ8 436 aa19.52■□□□□ 0.72
COL5A1-203ENST00000460264 DNASE2BQ8WZ79 361 aa19.52■□□□□ 0.72
COL5A1-203ENST00000460264 IGSF8Q969P0 613 aa19.52■□□□□ 0.72
COL5A1-203ENST00000460264 PGAP3Q96FM1 320 aaPredicted RBP19.52■□□□□ 0.72
COL5A1-203ENST00000460264 RPRD1AQ96P16 312 aaPredicted RBP19.52■□□□□ 0.72
COL5A1-203ENST00000460264 RSPH9Q9H1X1 276 aaPredicted RBP19.52■□□□□ 0.72
COL5A1-203ENST00000460264 HSD3B7Q9H2F3 369 aa19.52■□□□□ 0.72
COL5A1-203ENST00000460264 TMEM63CQ9P1W3 806 aa19.52■□□□□ 0.72
COL5A1-203ENST00000460264 SUSD2Q9UGT4 822 aa19.52■□□□□ 0.72
COL5A1-203ENST00000460264 VANGL2Q9ULK5 521 aa19.52■□□□□ 0.72
COL5A1-203ENST00000460264 DOCK4Q8N1I0 1966 aa19.52■□□□□ 0.71
COL5A1-203ENST00000460264 ITIH6Q6UXX5 1313 aa19.51■□□□□ 0.71
COL5A1-203ENST00000460264 GOLGA8SH3BPF8 625 aa19.51■□□□□ 0.71
COL5A1-203ENST00000460264 I6L893 689 aaPredicted RBP19.51■□□□□ 0.71
COL5A1-203ENST00000460264 SIN3BO75182 1162 aa19.51■□□□□ 0.71
COL5A1-203ENST00000460264 KCNK5O95279 499 aa19.51■□□□□ 0.71
COL5A1-203ENST00000460264 DNTTP04053 509 aa19.51■□□□□ 0.71
COL5A1-203ENST00000460264 PDGFRAP16234 1089 aa19.51■□□□□ 0.71
COL5A1-203ENST00000460264 CHRNB2P17787 502 aa19.51■□□□□ 0.71
COL5A1-203ENST00000460264 MAOBP27338 520 aa19.51■□□□□ 0.71
COL5A1-203ENST00000460264 FLT3P36888 993 aa19.51■□□□□ 0.71
COL5A1-203ENST00000460264 ECT2LQ008S8 904 aa19.51■□□□□ 0.71
COL5A1-203ENST00000460264 FMO1Q01740 532 aa19.51■□□□□ 0.71
COL5A1-203ENST00000460264 CDR2Q01850 454 aa19.51■□□□□ 0.71
COL5A1-203ENST00000460264 SLC25A52Q3SY17 297 aa19.51■□□□□ 0.71
COL5A1-203ENST00000460264 TRNP1Q6NT89 227 aa19.51■□□□□ 0.71
COL5A1-203ENST00000460264 APTXQ7Z2E3 356 aaKnown RBP19.51■□□□□ 0.71
COL5A1-203ENST00000460264 SPAG5Q96R06 1193 aa19.51■□□□□ 0.71
COL5A1-203ENST00000460264 TBCBQ99426 244 aa19.51■□□□□ 0.71
COL5A1-203ENST00000460264 PCED1AQ9H1Q7 454 aa19.51■□□□□ 0.71
COL5A1-203ENST00000460264 ANLNQ9NQW6 1124 aa19.51■□□□□ 0.71
COL5A1-203ENST00000460264 ARHGEF38Q9NXL2 777 aa19.51■□□□□ 0.71
COL5A1-203ENST00000460264 LRRC10BA6NIK2 292 aa19.5■□□□□ 0.71
COL5A1-203ENST00000460264 METTL12A8MUP2 240 aa19.5■□□□□ 0.71
COL5A1-203ENST00000460264 TTC34A8MYJ7 566 aa19.5■□□□□ 0.71
COL5A1-203ENST00000460264 ADCY5O95622 1261 aa19.5■□□□□ 0.71
COL5A1-203ENST00000460264 CYP1A1P04798 512 aaPredicted RBP19.5■□□□□ 0.71
COL5A1-203ENST00000460264 MZF1P28698 734 aaPredicted RBP19.5■□□□□ 0.71
COL5A1-203ENST00000460264 ACSL1P33121 698 aa19.5■□□□□ 0.71
COL5A1-203ENST00000460264 PLK1P53350 603 aa19.5■□□□□ 0.71
COL5A1-203ENST00000460264 OXCT1P55809 520 aa19.5■□□□□ 0.71
COL5A1-203ENST00000460264 DEUP1Q05D60 604 aa19.5■□□□□ 0.71
COL5A1-203ENST00000460264 UAP1L1Q3KQV9 507 aa19.5■□□□□ 0.71
COL5A1-203ENST00000460264 TTC31Q49AM3 519 aaPredicted RBP19.5■□□□□ 0.71
COL5A1-203ENST00000460264 C5orf22Q49AR2 442 aa19.5■□□□□ 0.71
COL5A1-203ENST00000460264 C9orf64Q5T6V5 341 aa19.5■□□□□ 0.71
COL5A1-203ENST00000460264 DCAF12L1Q5VU92 463 aa19.5■□□□□ 0.71
COL5A1-203ENST00000460264 RNF219Q5W0B1 726 aaPredicted RBP19.5■□□□□ 0.71
COL5A1-203ENST00000460264 PSAPL1Q6NUJ1 521 aa19.5■□□□□ 0.71
COL5A1-203ENST00000460264 SND1Q7KZF4 910 aaKnown RBP eCLIP19.5■□□□□ 0.71
COL5A1-203ENST00000460264 C14orf80Q86SX3 495 aa19.5■□□□□ 0.71
COL5A1-203ENST00000460264 DHX40Q8IX18 779 aaKnown RBP19.5■□□□□ 0.71
COL5A1-203ENST00000460264 AOPEPQ8N6M6 819 aa19.5■□□□□ 0.71
COL5A1-203ENST00000460264 NEK11Q8NG66 645 aa19.5■□□□□ 0.71
COL5A1-203ENST00000460264 GTPBP2Q9BX10 602 aaKnown RBP19.5■□□□□ 0.71
COL5A1-203ENST00000460264 TKTL2Q9H0I9 626 aa19.5■□□□□ 0.71
COL5A1-203ENST00000460264 SIK2Q9H0K1 926 aa19.5■□□□□ 0.71
COL5A1-203ENST00000460264 WDCPQ9H6R7 721 aa19.5■□□□□ 0.71
COL5A1-203ENST00000460264 SLCO3A1Q9UIG8 710 aa19.5■□□□□ 0.71
COL5A1-203ENST00000460264 TMEM59LQ9UK28 342 aa19.5■□□□□ 0.71
COL5A1-203ENST00000460264 EDDM13A0A1B0GTR0 161 aa19.49■□□□□ 0.71
COL5A1-203ENST00000460264 ARHGAP33O14559 1287 aa19.49■□□□□ 0.71
COL5A1-203ENST00000460264 F9P00740 461 aa19.49■□□□□ 0.71
COL5A1-203ENST00000460264 GNSP15586 552 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms