RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 RNF139Q8WU17 664 aa17.83■□□□□ 0.44
UBE2D4-209ENST00000454428 SEMA4DQ92854 862 aa17.83■□□□□ 0.44
UBE2D4-209ENST00000454428 PTPRN2Q92932 1015 aa17.83■□□□□ 0.44
UBE2D4-209ENST00000454428 TATDN2Q93075 761 aa17.83■□□□□ 0.44
UBE2D4-209ENST00000454428 ASCL3Q9NQ33 180 aa17.83■□□□□ 0.44
UBE2D4-209ENST00000454428 CISHQ9NSE2 258 aa17.83■□□□□ 0.44
UBE2D4-209ENST00000454428 STIM2Q9P246 746 aa17.83■□□□□ 0.44
UBE2D4-209ENST00000454428 SLCO3A1Q9UIG8 710 aa17.83■□□□□ 0.44
UBE2D4-209ENST00000454428 ERVW-1Q9UQF0 538 aa17.83■□□□□ 0.44
UBE2D4-209ENST00000454428 TARSL2A2RTX5 802 aaKnown RBP17.82■□□□□ 0.44
UBE2D4-209ENST00000454428 XPO1O14980 1071 aaKnown RBP17.82■□□□□ 0.44
UBE2D4-209ENST00000454428 CUTAO60888 179 aa17.82■□□□□ 0.44
UBE2D4-209ENST00000454428 GABBR2O75899 941 aa17.82■□□□□ 0.44
UBE2D4-209ENST00000454428 WISP1O95388 367 aa17.82■□□□□ 0.44
UBE2D4-209ENST00000454428 ASLP04424 464 aa17.82■□□□□ 0.44
UBE2D4-209ENST00000454428 NEFLP07196 543 aa17.82■□□□□ 0.44
UBE2D4-209ENST00000454428 GIMD1P0DJR0 217 aa17.82■□□□□ 0.44
UBE2D4-209ENST00000454428 RPS24P62847 133 aaKnown RBP17.82■□□□□ 0.44
UBE2D4-209ENST00000454428 GABREP78334 506 aa17.82■□□□□ 0.44
UBE2D4-209ENST00000454428 ADIGQ0VDE8 80 aa17.82■□□□□ 0.44
UBE2D4-209ENST00000454428 SFSWAPQ12872 951 aaKnown RBP17.82■□□□□ 0.44
UBE2D4-209ENST00000454428 GOLGA7BQ2TAP0 167 aa17.82■□□□□ 0.44
UBE2D4-209ENST00000454428 SLC45A4Q5BKX6 768 aa17.82■□□□□ 0.44
UBE2D4-209ENST00000454428 BROXQ5VW32 411 aa17.82■□□□□ 0.44
UBE2D4-209ENST00000454428 MSANTD2Q6P1R3 559 aa17.82■□□□□ 0.44
UBE2D4-209ENST00000454428 IQCHQ86VS3 1027 aa17.82■□□□□ 0.44
UBE2D4-209ENST00000454428 IRX2Q9BZI1 471 aaPredicted RBP17.82■□□□□ 0.44
UBE2D4-209ENST00000454428 UCKL1Q9NWZ5 548 aa17.82■□□□□ 0.44
UBE2D4-209ENST00000454428 CA5BQ9Y2D0 317 aa17.82■□□□□ 0.44
UBE2D4-209ENST00000454428 EDDM13A0A1B0GTR0 161 aa17.81■□□□□ 0.44
UBE2D4-209ENST00000454428 A0A1W2PNU3 283 aaPredicted RBP17.81■□□□□ 0.44
UBE2D4-209ENST00000454428 MAPK13O15264 365 aa17.81■□□□□ 0.44
UBE2D4-209ENST00000454428 IRAK2O43187 625 aa17.81■□□□□ 0.44
UBE2D4-209ENST00000454428 ACSL4O60488 711 aa17.81■□□□□ 0.44
UBE2D4-209ENST00000454428 C5AR1P21730 350 aa17.81■□□□□ 0.44
UBE2D4-209ENST00000454428 MZF1P28698 734 aaPredicted RBP17.81■□□□□ 0.44
UBE2D4-209ENST00000454428 ERVPABLB-1P60509 514 aa17.81■□□□□ 0.44
UBE2D4-209ENST00000454428 VAC14Q08AM6 782 aa17.81■□□□□ 0.44
UBE2D4-209ENST00000454428 PITRM1Q5JRX3 1037 aa17.81■□□□□ 0.44
UBE2D4-209ENST00000454428 KCNE4Q8WWG9 221 aa17.81■□□□□ 0.44
UBE2D4-209ENST00000454428 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.81■□□□□ 0.44
UBE2D4-209ENST00000454428 ZSCAN16Q9H4T2 348 aaPredicted RBP17.81■□□□□ 0.44
UBE2D4-209ENST00000454428 CYTH4Q9UIA0 394 aa17.81■□□□□ 0.44
UBE2D4-209ENST00000454428 TPX2Q9ULW0 747 aaKnown RBP17.81■□□□□ 0.44
UBE2D4-209ENST00000454428 FRMD4BQ9Y2L6 1034 aa17.81■□□□□ 0.44
UBE2D4-209ENST00000454428 RELNP78509 3460 aa17.81■□□□□ 0.44
UBE2D4-209ENST00000454428 TDRD6O60522 2096 aaKnown RBP17.81■□□□□ 0.44
UBE2D4-209ENST00000454428 NBPF19A0A087WUL8 3843 aa17.81■□□□□ 0.44
UBE2D4-209ENST00000454428 TBC1D3DA0A087WVF3 549 aa17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 TBC1D3IA0A087WXS9 549 aa17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 TBC1D3EA0A087X179 549 aa17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 TBC1D3KA0A087X1G2 549 aa17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 LY6G6EA0A0G2JKS1 128 aa17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 A0A1B0GVM2 712 aa17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 TBC1D3FA6NER0 549 aaPredicted RBP17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 TBC1D3LB9A6J9 549 aa17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 KLK10O43240 276 aa17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 SLC28A2O43868 658 aa17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 OPA1O60313 960 aa17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 USP12O75317 370 aa17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 ADH1BP00325 375 aa17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 SRPRAP08240 638 aaKnown RBP17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 TBC1D3HP0C7X1 549 aa17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 PDIA4P13667 645 aaKnown RBP17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 VAV1P15498 845 aa17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 DGKAP23743 735 aa17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 MAT2AP31153 395 aaKnown RBP17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 LSSP48449 732 aa17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 KMT5BQ4FZB7 885 aa17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 TBC1D3GQ6DHY5 549 aa17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 TBC1D3CQ6IPX1 549 aa17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 TBC1D3Q8IZP1 549 aaPredicted RBP17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 OR4C6Q8NH72 309 aa17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 MED8Q96G25 268 aa17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 MMRN2Q9H8L6 949 aa17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 ABCC13Q9NSE7 274 aa17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 TSPAN16Q9UKR8 245 aa17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 TRAF3IP3Q9Y228 551 aa17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 U3KQA8 63 aa17.8■□□□□ 0.44
UBE2D4-209ENST00000454428 RTN2O75298 545 aa17.79■□□□□ 0.44
UBE2D4-209ENST00000454428 MYF5P13349 255 aa17.79■□□□□ 0.44
UBE2D4-209ENST00000454428 STK19P49842 368 aaPredicted RBP17.79■□□□□ 0.44
UBE2D4-209ENST00000454428 DAOAP59103 153 aa17.79■□□□□ 0.44
UBE2D4-209ENST00000454428 MCCD1P59942 119 aaPredicted RBP17.79■□□□□ 0.44
UBE2D4-209ENST00000454428 SKOR1P84550 965 aa17.79■□□□□ 0.44
UBE2D4-209ENST00000454428 SRSF1Q07955 248 aaKnown RBP eCLIP17.79■□□□□ 0.44
UBE2D4-209ENST00000454428 OVGP1Q12889 678 aa17.79■□□□□ 0.44
UBE2D4-209ENST00000454428 KIAA1614Q5VZ46 1190 aa17.79■□□□□ 0.44
UBE2D4-209ENST00000454428 APCDD1Q8J025 514 aa17.79■□□□□ 0.44
UBE2D4-209ENST00000454428 LSMEM2Q8N112 164 aa17.79■□□□□ 0.44
UBE2D4-209ENST00000454428 SCML4Q8N228 414 aa17.79■□□□□ 0.44
UBE2D4-209ENST00000454428 CARNMT1Q8N4J0 409 aa17.79■□□□□ 0.44
UBE2D4-209ENST00000454428 ZNF557Q8N988 423 aaPredicted RBP17.79■□□□□ 0.44
UBE2D4-209ENST00000454428 HJURPQ8NCD3 748 aaPredicted RBP17.79■□□□□ 0.44
UBE2D4-209ENST00000454428 AZIN2Q96A70 460 aa17.79■□□□□ 0.44
UBE2D4-209ENST00000454428 VCPIP1Q96JH7 1222 aa17.79■□□□□ 0.44
UBE2D4-209ENST00000454428 RPL10LQ96L21 214 aaKnown RBP17.79■□□□□ 0.44
UBE2D4-209ENST00000454428 DPH1Q9BZG8 443 aa17.79■□□□□ 0.44
UBE2D4-209ENST00000454428 DNAI2Q9GZS0 605 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms