RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 FERMT1Q9BQL6 677 aa16.68■□□□□ 0.26
PIKFYVE-206ENST00000443896 PRDM12Q9H4Q4 367 aa16.68■□□□□ 0.26
PIKFYVE-206ENST00000443896 TMEM30AQ9NV96 361 aa16.68■□□□□ 0.26
PIKFYVE-206ENST00000443896 NMRK1Q9NWW6 199 aa16.68■□□□□ 0.26
PIKFYVE-206ENST00000443896 CDH9Q9ULB4 789 aa16.68■□□□□ 0.26
PIKFYVE-206ENST00000443896 TIMM13Q9Y5L4 95 aaPredicted RBP16.68■□□□□ 0.26
PIKFYVE-206ENST00000443896 PTCH2Q9Y6C5 1203 aa16.68■□□□□ 0.26
PIKFYVE-206ENST00000443896 CAPN9O14815 690 aa16.68■□□□□ 0.26
PIKFYVE-206ENST00000443896 ALDH1A2O94788 518 aa16.68■□□□□ 0.26
PIKFYVE-206ENST00000443896 IL1BP01584 269 aa16.68■□□□□ 0.26
PIKFYVE-206ENST00000443896 USP46P62068 366 aa16.68■□□□□ 0.26
PIKFYVE-206ENST00000443896 WASHC5Q12768 1159 aa16.68■□□□□ 0.26
PIKFYVE-206ENST00000443896 SEMA3BQ13214 749 aa16.68■□□□□ 0.26
PIKFYVE-206ENST00000443896 CXCL17Q6UXB2 119 aa16.68■□□□□ 0.26
PIKFYVE-206ENST00000443896 DSTYKQ6XUX3 929 aa16.68■□□□□ 0.26
PIKFYVE-206ENST00000443896 NLRP9Q7RTR0 991 aa16.68■□□□□ 0.26
PIKFYVE-206ENST00000443896 PDCD7Q8N8D1 485 aaKnown RBP16.68■□□□□ 0.26
PIKFYVE-206ENST00000443896 NETO2Q8NC67 525 aa16.68■□□□□ 0.26
PIKFYVE-206ENST00000443896 PGAP3Q96FM1 320 aaPredicted RBP16.68■□□□□ 0.26
PIKFYVE-206ENST00000443896 IQCGQ9H095 443 aaKnown RBP16.68■□□□□ 0.26
PIKFYVE-206ENST00000443896 PLLPQ9Y342 182 aa16.68■□□□□ 0.26
PIKFYVE-206ENST00000443896 HMX2A2RU54 273 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 KLF11O14901 512 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 CTSHP09668 335 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 SERPINB9P50453 376 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 INHBCP55103 352 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 PARP6Q2NL67 630 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 AGMOQ6ZNB7 445 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 SERINC5Q86VE9 423 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 ANLNQ9NQW6 1124 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 KANSL3Q9P2N6 904 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 ZNF638Q14966 1978 aaKnown RBP16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 SDR42E2A6NKP2 422 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 HHLA1C9JL84 531 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 TGDSO95455 350 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 CTGFP29279 349 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 RPL9P32969 192 aaKnown RBP16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 BMPR2Q13873 1038 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 WDR27A2RRH5 827 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 FAM72CH0Y354 149 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 I6L893 689 aaPredicted RBP16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 CYBAP13498 195 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 SCNN1GP51170 649 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 MGAT3Q09327 533 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 OVGP1Q12889 678 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 FAM72AQ5TYM5 149 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 FAM72DQ6L9T8 149 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 RFWD3Q6PCD5 774 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 MRPL10Q7Z7H8 261 aaKnown RBP16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 FAM72BQ86X60 149 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 ZNF567Q8N184 647 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 CCNYQ8ND76 341 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 RFWD2Q8NHY2 731 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 IGSF9Q9P2J2 1179 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 FBXW11Q9UKB1 542 aa16.67■□□□□ 0.26
PIKFYVE-206ENST00000443896 F5H423 210 aaPredicted RBP16.66■□□□□ 0.26
PIKFYVE-206ENST00000443896 NVLO15381 856 aaKnown RBP16.66■□□□□ 0.26
PIKFYVE-206ENST00000443896 IMPDH2P12268 514 aa16.66■□□□□ 0.26
PIKFYVE-206ENST00000443896 BGNP21810 368 aa16.66■□□□□ 0.26
PIKFYVE-206ENST00000443896 UPP1Q16831 310 aa16.66■□□□□ 0.26
PIKFYVE-206ENST00000443896 TIFABQ6ZNK6 161 aa16.66■□□□□ 0.26
PIKFYVE-206ENST00000443896 BHLHA9Q7RTU4 235 aa16.66■□□□□ 0.26
PIKFYVE-206ENST00000443896 ADAM32Q8TC27 787 aa16.66■□□□□ 0.26
PIKFYVE-206ENST00000443896 DEPDC1BQ8WUY9 529 aa16.66■□□□□ 0.26
PIKFYVE-206ENST00000443896 TRIM55Q9BYV6 548 aa16.66■□□□□ 0.26
PIKFYVE-206ENST00000443896 LRMDAQ9H2I8 198 aa16.66■□□□□ 0.26
PIKFYVE-206ENST00000443896 ZFYVE28Q9HCC9 887 aa16.66■□□□□ 0.26
PIKFYVE-206ENST00000443896 RAD54BQ9Y620 910 aa16.66■□□□□ 0.26
PIKFYVE-206ENST00000443896 ZNF189O75820 626 aaPredicted RBP16.66■□□□□ 0.26
PIKFYVE-206ENST00000443896 USP17L7P0C7H9 530 aa16.66■□□□□ 0.26
PIKFYVE-206ENST00000443896 NCAM1P13591 858 aa16.66■□□□□ 0.26
PIKFYVE-206ENST00000443896 PSMB4P28070 264 aa16.66■□□□□ 0.26
PIKFYVE-206ENST00000443896 HCAR3P49019 387 aa16.66■□□□□ 0.26
PIKFYVE-206ENST00000443896 TP53INP2Q8IXH6 220 aa16.66■□□□□ 0.26
PIKFYVE-206ENST00000443896 ARNTL2Q8WYA1 636 aa16.66■□□□□ 0.26
PIKFYVE-206ENST00000443896 SMARCD1Q96GM5 515 aa16.66■□□□□ 0.26
PIKFYVE-206ENST00000443896 CEP41Q9BYV8 373 aa16.66■□□□□ 0.26
PIKFYVE-206ENST00000443896 UPF3AQ9H1J1 476 aaKnown RBP16.66■□□□□ 0.26
PIKFYVE-206ENST00000443896 RRN3Q9NYV6 651 aa16.66■□□□□ 0.26
PIKFYVE-206ENST00000443896 SEPT10Q9P0V9 454 aa16.66■□□□□ 0.26
PIKFYVE-206ENST00000443896 CASTOR2A6NHX0 329 aa16.65■□□□□ 0.26
PIKFYVE-206ENST00000443896 GPR182O15218 404 aa16.65■□□□□ 0.26
PIKFYVE-206ENST00000443896 LTFP02788 710 aa16.65■□□□□ 0.26
PIKFYVE-206ENST00000443896 ERCC2P18074 760 aa16.65■□□□□ 0.26
PIKFYVE-206ENST00000443896 CNTFP26441 200 aa16.65■□□□□ 0.26
PIKFYVE-206ENST00000443896 NIPAL4Q0D2K0 466 aa16.65■□□□□ 0.26
PIKFYVE-206ENST00000443896 MARK2Q7KZI7 788 aaKnown RBP16.65■□□□□ 0.26
PIKFYVE-206ENST00000443896 ZFAND2BQ8WV99 257 aa16.65■□□□□ 0.26
PIKFYVE-206ENST00000443896 DNAJC1Q96KC8 554 aaKnown RBP16.65■□□□□ 0.26
PIKFYVE-206ENST00000443896 PAAF1Q9BRP4 392 aa16.65■□□□□ 0.26
PIKFYVE-206ENST00000443896 DENND2DQ9H6A0 471 aaPredicted RBP16.65■□□□□ 0.26
PIKFYVE-206ENST00000443896 AGO3Q9H9G7 860 aaKnown RBP16.65■□□□□ 0.26
PIKFYVE-206ENST00000443896 CSNK1G1Q9HCP0 422 aa16.65■□□□□ 0.26
PIKFYVE-206ENST00000443896 PGK1P00558 417 aa16.65■□□□□ 0.26
PIKFYVE-206ENST00000443896 AMHP03971 560 aa16.65■□□□□ 0.26
PIKFYVE-206ENST00000443896 T-ENOLP0DO92 83 aa16.65■□□□□ 0.26
PIKFYVE-206ENST00000443896 PCSK1P29120 753 aa16.65■□□□□ 0.26
PIKFYVE-206ENST00000443896 TIGD5Q53EQ6 642 aa16.65■□□□□ 0.26
PIKFYVE-206ENST00000443896 PDZD4Q76G19 769 aaPredicted RBP16.65■□□□□ 0.26
PIKFYVE-206ENST00000443896 SCG3Q8WXD2 468 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms