RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 REXO1L1PQ8IX06 675 aa31.49■■■□□ 2.63
CSNK1E-206ENST00000413574 ZNF687Q8N1G0 1237 aa31.49■■■□□ 2.63
CSNK1E-206ENST00000413574 FIBINQ8TAL6 211 aa31.49■■■□□ 2.63
CSNK1E-206ENST00000413574 SLC2A11Q9BYW1 496 aa31.49■■■□□ 2.63
CSNK1E-206ENST00000413574 MFSD1Q9H3U5 465 aa31.49■■■□□ 2.63
CSNK1E-206ENST00000413574 NDFIP2Q9NV92 336 aa31.49■■■□□ 2.63
CSNK1E-206ENST00000413574 ZNF212Q9UDV6 495 aa31.49■■■□□ 2.63
CSNK1E-206ENST00000413574 CLDN11O75508 207 aa31.48■■■□□ 2.63
CSNK1E-206ENST00000413574 MARCKSL1P49006 195 aa31.48■■■□□ 2.63
CSNK1E-206ENST00000413574 CDH6P55285 790 aa31.48■■■□□ 2.63
CSNK1E-206ENST00000413574 ZFYVE27Q5T4F4 411 aa31.48■■■□□ 2.63
CSNK1E-206ENST00000413574 CXorf57Q6NSI4 855 aaKnown RBP31.48■■■□□ 2.63
CSNK1E-206ENST00000413574 C1orf228Q6PIY5 440 aa31.48■■■□□ 2.63
CSNK1E-206ENST00000413574 CHST9Q7L1S5 443 aa31.48■■■□□ 2.63
CSNK1E-206ENST00000413574 POLNQ7Z5Q5 900 aa31.48■■■□□ 2.63
CSNK1E-206ENST00000413574 RHOT1Q8IXI2 618 aa31.48■■■□□ 2.63
CSNK1E-206ENST00000413574 RBM12Q9NTZ6 932 aaKnown RBP31.48■■■□□ 2.63
CSNK1E-206ENST00000413574 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP31.47■■■□□ 2.63
CSNK1E-206ENST00000413574 FAM170BA6NMN3 283 aa31.47■■■□□ 2.63
CSNK1E-206ENST00000413574 HOXC13P31276 330 aa31.47■■■□□ 2.63
CSNK1E-206ENST00000413574 ARSEP51690 589 aa31.47■■■□□ 2.63
CSNK1E-206ENST00000413574 GRSF1Q12849 480 aaKnown RBP eCLIP31.47■■■□□ 2.63
CSNK1E-206ENST00000413574 LMAN2Q12907 356 aa31.47■■■□□ 2.63
CSNK1E-206ENST00000413574 ZNF177Q13360 481 aaPredicted RBP31.47■■■□□ 2.63
CSNK1E-206ENST00000413574 KRT81Q14533 505 aa31.47■■■□□ 2.63
CSNK1E-206ENST00000413574 NLRP14Q86W24 1093 aa31.47■■■□□ 2.63
CSNK1E-206ENST00000413574 TERB1Q8NA31 727 aa31.47■■■□□ 2.63
CSNK1E-206ENST00000413574 RAPGEF5Q92565 580 aa31.47■■■□□ 2.63
CSNK1E-206ENST00000413574 LMLNQ96KR4 655 aa31.47■■■□□ 2.63
CSNK1E-206ENST00000413574 SLC27A6Q9Y2P4 619 aa31.47■■■□□ 2.63
CSNK1E-206ENST00000413574 PRRT4C9JH25 899 aa31.46■■■□□ 2.63
CSNK1E-206ENST00000413574 FTCDO95954 541 aa31.46■■■□□ 2.63
CSNK1E-206ENST00000413574 APODP05090 189 aa31.46■■■□□ 2.63
CSNK1E-206ENST00000413574 MMRN1Q13201 1228 aa31.46■■■□□ 2.63
CSNK1E-206ENST00000413574 CCDC117Q8IWD4 279 aaPredicted RBP31.46■■■□□ 2.63
CSNK1E-206ENST00000413574 KCTD6Q8NC69 237 aa31.46■■■□□ 2.63
CSNK1E-206ENST00000413574 KRT35Q92764 455 aa31.46■■■□□ 2.63
CSNK1E-206ENST00000413574 DNAI1Q9UI46 699 aa31.46■■■□□ 2.63
CSNK1E-206ENST00000413574 TBC1D3BA6NDS4 549 aa31.46■■■□□ 2.63
CSNK1E-206ENST00000413574 USP27XA6NNY8 438 aa31.46■■■□□ 2.63
CSNK1E-206ENST00000413574 RHOQP17081 205 aa31.46■■■□□ 2.63
CSNK1E-206ENST00000413574 OR1E1P30953 314 aa31.46■■■□□ 2.63
CSNK1E-206ENST00000413574 GRIA2P42262 883 aa31.46■■■□□ 2.63
CSNK1E-206ENST00000413574 LRRC38Q5VT99 294 aa31.46■■■□□ 2.63
CSNK1E-206ENST00000413574 TMEM215Q68D42 235 aa31.46■■■□□ 2.63
CSNK1E-206ENST00000413574 RFX8Q6ZV50 586 aa31.46■■■□□ 2.63
CSNK1E-206ENST00000413574 NT5DC3Q86UY8 548 aa31.46■■■□□ 2.63
CSNK1E-206ENST00000413574 GGA2Q9UJY4 613 aa31.46■■■□□ 2.63
CSNK1E-206ENST00000413574 MRPS17Q9Y2R5 130 aaKnown RBP31.46■■■□□ 2.63
CSNK1E-206ENST00000413574 K7EQS6 105 aa31.45■■■□□ 2.62
CSNK1E-206ENST00000413574 DRD1P21728 446 aa31.45■■■□□ 2.62
CSNK1E-206ENST00000413574 IL4RP24394 825 aa31.45■■■□□ 2.62
CSNK1E-206ENST00000413574 FZD5Q13467 585 aa31.45■■■□□ 2.62
CSNK1E-206ENST00000413574 CCINQ13939 588 aa31.45■■■□□ 2.62
CSNK1E-206ENST00000413574 DPYSL3Q14195 570 aa31.45■■■□□ 2.62
CSNK1E-206ENST00000413574 CWF19L1Q69YN2 538 aaKnown RBP31.45■■■□□ 2.62
CSNK1E-206ENST00000413574 FAM71BQ8TC56 605 aa31.45■■■□□ 2.62
CSNK1E-206ENST00000413574 TSC1Q92574 1164 aa31.45■■■□□ 2.62
CSNK1E-206ENST00000413574 CALN1Q9BXU9 219 aa31.45■■■□□ 2.62
CSNK1E-206ENST00000413574 PACSIN2Q9UNF0 486 aaPredicted RBP31.45■■■□□ 2.62
CSNK1E-206ENST00000413574 TBC1D30Q9Y2I9 924 aa31.45■■■□□ 2.62
CSNK1E-206ENST00000413574 FAM86C2PA6NEL3 165 aa31.44■■■□□ 2.62
CSNK1E-206ENST00000413574 DAPK3O43293 454 aa31.44■■■□□ 2.62
CSNK1E-206ENST00000413574 ZSCAN12O43309 604 aa31.44■■■□□ 2.62
CSNK1E-206ENST00000413574 CHRNB1P11230 501 aa31.44■■■□□ 2.62
CSNK1E-206ENST00000413574 PABPC1P11940 636 aaKnown RBP31.44■■■□□ 2.62
CSNK1E-206ENST00000413574 MZF1P28698 734 aaPredicted RBP31.44■■■□□ 2.62
CSNK1E-206ENST00000413574 CSKP41240 450 aa31.44■■■□□ 2.62
CSNK1E-206ENST00000413574 PJA1Q8NG27 643 aa31.44■■■□□ 2.62
CSNK1E-206ENST00000413574 EXOC4Q96A65 974 aa31.44■■■□□ 2.62
CSNK1E-206ENST00000413574 CSPG4P5Q96PW8 444 aa31.44■■■□□ 2.62
CSNK1E-206ENST00000413574 TMEM248Q9NWD8 314 aa31.44■■■□□ 2.62
CSNK1E-206ENST00000413574 KIAA1522Q9P206 1035 aaPredicted RBP31.44■■■□□ 2.62
CSNK1E-206ENST00000413574 INTS6Q9UL03 887 aaKnown RBP31.44■■■□□ 2.62
CSNK1E-206ENST00000413574 H3BRJ5 948 aa31.43■■■□□ 2.62
CSNK1E-206ENST00000413574 PSTPIP1O43586 416 aa31.43■■■□□ 2.62
CSNK1E-206ENST00000413574 KDELR1P24390 212 aa31.43■■■□□ 2.62
CSNK1E-206ENST00000413574 ARL4AP40617 200 aa31.43■■■□□ 2.62
CSNK1E-206ENST00000413574 SEC13P55735 322 aa31.43■■■□□ 2.62
CSNK1E-206ENST00000413574 PEX26Q7Z412 305 aa31.43■■■□□ 2.62
CSNK1E-206ENST00000413574 ANKS1BQ7Z6G8 1248 aa31.43■■■□□ 2.62
CSNK1E-206ENST00000413574 APCDD1Q8J025 514 aa31.43■■■□□ 2.62
CSNK1E-206ENST00000413574 SYCE1Q8N0S2 351 aa31.43■■■□□ 2.62
CSNK1E-206ENST00000413574 RTL3Q8N8U3 475 aaKnown RBP31.43■■■□□ 2.62
CSNK1E-206ENST00000413574 LMAN1LQ9HAT1 526 aa31.43■■■□□ 2.62
CSNK1E-206ENST00000413574 ZDHHC4Q9NPG8 344 aa31.43■■■□□ 2.62
CSNK1E-206ENST00000413574 NUP205Q92621 2012 aa31.43■■■□□ 2.62
CSNK1E-206ENST00000413574 A0A0A0MRY4 1105 aa31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 LRRD1A4D1F6 860 aa31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 KRT1P04264 644 aa31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 RHOCP08134 193 aa31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 ERCC2P18074 760 aa31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 AMPD1P23109 780 aa31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 HTR7P34969 479 aa31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 DPYSQ14117 519 aa31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 FUT11Q495W5 492 aa31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 EMC10Q5UCC4 262 aa31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 KIAA0907Q7Z7F0 614 aaPredicted RBP31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 ADIPOR2Q86V24 386 aa31.42■■■□□ 2.62
CSNK1E-206ENST00000413574 SUGP1Q8IWZ8 645 aaKnown RBP31.42■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms