RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 DGKKQ5KSL6 1271 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 HES5Q5TA89 166 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 CACHD1Q5VU97 1274 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 SLFN13Q68D06 897 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 LMBRD2Q68DH5 695 aaPredicted RBP3.7□□□□□ -1.82
XRCC4-203ENST00000396027 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
XRCC4-203ENST00000396027 ZFP1Q6P2D0 407 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 KLHDC10Q6PID8 442 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 ZYG11AQ6WRX3 759 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 USP43Q70EL4 1123 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 EPM2AIP1Q7L775 607 aaPredicted RBP3.7□□□□□ -1.82
XRCC4-203ENST00000396027 FRMD5Q7Z6J6 570 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 LHFPL3Q86UP9 236 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 CCDC84Q86UT8 332 aaPredicted RBP3.7□□□□□ -1.82
XRCC4-203ENST00000396027 ZNF410Q86VK4 478 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 RASSF3Q86WH2 238 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 TDRPQ86YL5 185 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 GATAD2AQ86YP4 633 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 TMPRSS6Q8IU80 811 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 LACC1Q8IV20 430 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 GLYCTKQ8IVS8 523 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 CPXCR1Q8N123 301 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 REXO1Q8N1G1 1221 aaKnown RBP3.7□□□□□ -1.82
XRCC4-203ENST00000396027 ANKRD35Q8N283 1001 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 METTL25Q8N6Q8 603 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 PLD5Q8N7P1 536 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 ASCC1Q8N9N2 400 aaKnown RBP3.7□□□□□ -1.82
XRCC4-203ENST00000396027 SLC4A11Q8NBS3 891 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 KCNH5Q8NCM2 988 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 FAM13CQ8NE31 585 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 FEZF2Q8TBJ5 459 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 RAB3IL1Q8TBN0 382 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 IFI44Q8TCB0 444 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 SSH3Q8TE77 659 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 XAGE3Q8WTP9 111 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 SETD7Q8WTS6 366 aaKnown RBP3.7□□□□□ -1.82
XRCC4-203ENST00000396027 FAM172AQ8WUF8 416 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 PRG4Q92954 1404 aaPredicted RBP3.7□□□□□ -1.82
XRCC4-203ENST00000396027 ATP2A3Q93084 1043 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 AHCYL2Q96HN2 611 aaKnown RBP3.7□□□□□ -1.82
XRCC4-203ENST00000396027 PLEKHA8Q96JA3 519 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 CHAMP1Q96JM3 812 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 EXOC2Q96KP1 924 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 EGLN2Q96KS0 407 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 MAGEB18Q96M61 343 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 QKIQ96PU8 341 aaKnown RBP eCLIP3.7□□□□□ -1.821e-7■■■■□ 23.1
XRCC4-203ENST00000396027 ZNF347Q96SE7 839 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 FAM129BQ96TA1 746 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 APBA2Q99767 749 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 TCEAL7Q9BRU2 100 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 BDH2Q9BUT1 245 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 DUSP23Q9BVJ7 150 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 AP1M1Q9BXS5 423 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 CALN1Q9BXU9 219 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 YTHDF1Q9BYJ9 559 aaKnown RBP3.7□□□□□ -1.82
XRCC4-203ENST00000396027 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.7□□□□□ -1.82
XRCC4-203ENST00000396027 SLC6A17Q9H1V8 727 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 CLEC4MQ9H2X3 399 aaPredicted RBP3.7□□□□□ -1.82
XRCC4-203ENST00000396027 TUT1Q9H6E5 874 aaKnown RBP3.7□□□□□ -1.82
XRCC4-203ENST00000396027 KBTBD4Q9NVX7 518 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 FANCLQ9NW38 375 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 DNAJC28Q9NX36 388 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 GDAP2Q9NXN4 497 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.7□□□□□ -1.82
XRCC4-203ENST00000396027 PRKAG3Q9UGI9 489 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 LIMA1Q9UHB6 759 aaKnown RBP3.7□□□□□ -1.82
XRCC4-203ENST00000396027 GPN3Q9UHW5 284 aaPredicted RBP3.7□□□□□ -1.82
XRCC4-203ENST00000396027 EDARQ9UNE0 448 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 INVSQ9Y283 1065 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 TLR6Q9Y2C9 796 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 AP3M1Q9Y2T2 418 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 UGT2A1Q9Y4X1 527 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 HEY1Q9Y5J3 304 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 ZHX2Q9Y6X8 837 aa3.7□□□□□ -1.82
XRCC4-203ENST00000396027 TRPM1Q7Z4N2 1603 aa3.69□□□□□ -1.82
XRCC4-203ENST00000396027 ATP10BO94823 1461 aa3.69□□□□□ -1.82
XRCC4-203ENST00000396027 IQSEC2Q5JU85 1478 aa3.69□□□□□ -1.82
XRCC4-203ENST00000396027 NEO1Q92859 1461 aa3.69□□□□□ -1.82
XRCC4-203ENST00000396027 ABCC4O15439 1325 aa3.69□□□□□ -1.82
XRCC4-203ENST00000396027 FLT1P17948 1338 aa3.69□□□□□ -1.82
XRCC4-203ENST00000396027 PCDH11XQ9BZA7 1347 aa3.69□□□□□ -1.82
XRCC4-203ENST00000396027 PCDH11YQ9BZA8 1340 aa3.69□□□□□ -1.82
XRCC4-203ENST00000396027 ZNF335Q9H4Z2 1342 aaPredicted RBP3.69□□□□□ -1.82
XRCC4-203ENST00000396027 STK36Q9NRP7 1315 aa3.69□□□□□ -1.82
XRCC4-203ENST00000396027 ADGBQ8N7X0 1667 aa3.69□□□□□ -1.82
XRCC4-203ENST00000396027 KIAA0586Q9BVV6 1533 aa3.69□□□□□ -1.82
XRCC4-203ENST00000396027 TROQ12816 1431 aaPredicted RBP3.69□□□□□ -1.82
XRCC4-203ENST00000396027 CYP2D7A0A087X1C5 515 aa3.69□□□□□ -1.82
XRCC4-203ENST00000396027 CARNS1A5YM72 827 aa3.69□□□□□ -1.82
XRCC4-203ENST00000396027 LRRC72A6NJI9 287 aa3.69□□□□□ -1.82
XRCC4-203ENST00000396027 ACOD1A6NK06 481 aa3.69□□□□□ -1.82
XRCC4-203ENST00000396027 C2orf74A8MZ97 194 aa3.69□□□□□ -1.82
XRCC4-203ENST00000396027 SGK1O00141 431 aa3.69□□□□□ -1.82
XRCC4-203ENST00000396027 DDX3XO00571 662 aaKnown RBP eCLIP3.69□□□□□ -1.82
XRCC4-203ENST00000396027 ZBTB43O43298 467 aa3.69□□□□□ -1.82
XRCC4-203ENST00000396027 ARHGEF9O43307 516 aa3.69□□□□□ -1.82
XRCC4-203ENST00000396027 AKAP10O43572 662 aa3.69□□□□□ -1.82
XRCC4-203ENST00000396027 SNAP91O60641 907 aa3.69□□□□□ -1.82
XRCC4-203ENST00000396027 NDUFS2O75306 463 aa3.69□□□□□ -1.82
XRCC4-203ENST00000396027 SOX30O94993 753 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms