RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 KLHDC8BQ8IXV7 354 aa9.28□□□□□ -0.92
TDP1-202ENST00000393452 SCAMP5Q8TAC9 235 aa9.28□□□□□ -0.92
TDP1-202ENST00000393452 ACMSDQ8TDX5 336 aa9.28□□□□□ -0.92
TDP1-202ENST00000393452 ERP27Q96DN0 273 aa9.28□□□□□ -0.92
TDP1-202ENST00000393452 IQCGQ9H095 443 aaKnown RBP9.28□□□□□ -0.92
TDP1-202ENST00000393452 GBA3Q9H227 469 aa9.28□□□□□ -0.92
TDP1-202ENST00000393452 GPBP1L1Q9HC44 474 aaPredicted RBP9.28□□□□□ -0.92
TDP1-202ENST00000393452 CASS4Q9NQ75 786 aa9.28□□□□□ -0.92
TDP1-202ENST00000393452 ABCC13Q9NSE7 274 aa9.28□□□□□ -0.92
TDP1-202ENST00000393452 SIRPGQ9P1W8 387 aa9.28□□□□□ -0.92
TDP1-202ENST00000393452 KANSL3Q9P2N6 904 aa9.28□□□□□ -0.92
TDP1-202ENST00000393452 NOD1Q9Y239 953 aa9.28□□□□□ -0.92
TDP1-202ENST00000393452 FNDC1Q4ZHG4 1894 aaPredicted RBP9.27□□□□□ -0.93
TDP1-202ENST00000393452 MYO16Q9Y6X6 1858 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 ZBTB24O43167 697 aaPredicted RBP9.27□□□□□ -0.93
TDP1-202ENST00000393452 OAZ2O95190 189 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 CKBP12277 381 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 NQO1P15559 274 aaKnown RBP9.27□□□□□ -0.93
TDP1-202ENST00000393452 SLC5A3P53794 718 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 KCNJ2P63252 427 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 FAM189BP81408 668 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 SP3Q02447 781 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 YWHAHQ04917 246 aaPredicted RBP9.27□□□□□ -0.93
TDP1-202ENST00000393452 ZBTB17Q13105 803 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 RIPK1Q13546 671 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 MBTPS1Q14703 1052 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 BRMS1LQ5PSV4 323 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 STXBP5Q5T5C0 1151 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 MROH9Q5TGP6 573 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 MANEALQ5VSG8 457 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 C4orf50Q6ZRC1 276 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 SLC24A5Q71RS6 500 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 NLRP9Q7RTR0 991 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 TMEM135Q86UB9 458 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 CDKL2Q92772 493 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 KLHL29Q96CT2 875 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 HAPLN3Q96S86 360 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 SMOC2Q9H3U7 446 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 ALG13Q9NP73 1137 aaKnown RBP9.27□□□□□ -0.93
TDP1-202ENST00000393452 NPHS2Q9NP85 383 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 PIH1D1Q9NWS0 290 aaKnown RBP9.27□□□□□ -0.93
TDP1-202ENST00000393452 SNX10Q9Y5X0 201 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 CEP350Q5VT06 3117 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 VWA8A3KMH1 1905 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 ATP5HO75947 161 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 DDHD2O94830 711 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 ALDOAP04075 364 aaKnown RBP9.27□□□□□ -0.93
TDP1-202ENST00000393452 POLBP06746 335 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 DLDP09622 509 aaKnown RBP9.27□□□□□ -0.93
TDP1-202ENST00000393452 BGNP21810 368 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 HTR7P34969 479 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 CLLU1OSQ5K130 101 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 SPANXN3Q5MJ09 141 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 ITPRIPL1Q6GPH6 555 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 GLB1LQ6UWU2 654 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 PACS1Q6VY07 963 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 TBC1D1Q86TI0 1168 aaPredicted RBP9.27□□□□□ -0.93
TDP1-202ENST00000393452 ZNF280BQ86YH2 543 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 SPATA2LQ8IUW3 424 aaPredicted RBP9.27□□□□□ -0.93
TDP1-202ENST00000393452 TRIM42Q8IWZ5 723 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 NDUFAF2Q8N183 169 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 OR52K1Q8NGK4 314 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 RAB3IL1Q8TBN0 382 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 LINC01599Q8WXQ3 324 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 TEKT5Q96M29 485 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 TSGA13Q96PP4 275 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 MLPHQ9BV36 600 aaPredicted RBP9.27□□□□□ -0.93
TDP1-202ENST00000393452 TRIM55Q9BYV6 548 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 SLC13A1Q9BZW2 595 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 KCNK13Q9HB14 408 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 TXLNGQ9NUQ3 528 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 PLXNA3P51805 1871 aa9.27□□□□□ -0.93
TDP1-202ENST00000393452 BIRC5O15392 142 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 CACNG3O60359 315 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 T-ENOLP0DO92 83 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 IBSPP21815 317 aaPredicted RBP9.26□□□□□ -0.93
TDP1-202ENST00000393452 APLP1P51693 650 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 OVGP1Q12889 678 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 OLIG2Q13516 323 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 DBN1Q16643 649 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 KYAT3Q6YP21 454 aaKnown RBP9.26□□□□□ -0.93
TDP1-202ENST00000393452 SCD5Q86SK9 330 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 COLGALT2Q8IYK4 626 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 STKLD1Q8NE28 680 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 ARMC2Q8NEN0 867 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 RFWD2Q8NHY2 731 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 CERS2Q96G23 380 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 C7orf26Q96N11 449 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 LRRC40Q9H9A6 602 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 PCMTD2Q9NV79 361 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 BFARQ9NZS9 450 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 SRRDQ9UH36 339 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 VANGL2Q9ULK5 521 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 PSAT1Q9Y617 370 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 RPS6KL1Q9Y6S9 549 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 DOCK4Q8N1I0 1966 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 ZCWPW2A0A1B0GU75 182 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 MOXD2PA6NHM9 499 aa9.26□□□□□ -0.93
TDP1-202ENST00000393452 HGSO14964 777 aaPredicted RBP9.26□□□□□ -0.93
TDP1-202ENST00000393452 PAGE1O75459 146 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms