RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 PCDHGC3Q9UN70 934 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 A0A0U1RQF3 1178 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 MAP3K7O43318 606 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 SOAT2O75908 522 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 IGSF6O95976 241 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 GJA9P57773 515 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 POU4F1Q01851 419 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 DMTNQ08495 405 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 PPIGQ13427 754 aaKnown RBP eCLIP13.4□□□□□ -0.268e-7■■□□□ 12.1
PTPRN2-202ENST00000389416 STARD3Q14849 445 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 STRADAQ7RTN6 431 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 PWWP2AQ96N64 755 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 ZBTB22O15209 634 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 PIAS1O75925 651 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 SYN1P17600 705 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 SLC8A1P32418 973 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 SERPINB8P50452 374 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 CLNS1AP54105 237 aaKnown RBP13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 CUL3Q13618 768 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 KCNMB4Q86W47 210 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 WWOXQ9NZC7 414 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 SLC24A2Q9UI40 661 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 MAGEB16A2A368 324 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 ATP5HO75947 161 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 ATP5BP06576 529 aaKnown RBP13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 POLR2EP19388 210 aaKnown RBP13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 CD86P42081 329 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 ASPAP45381 313 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 CREMQ03060 361 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 C1orf146Q5VVC0 180 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 SLC26A9Q7LBE3 791 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 DQX1Q8TE96 717 aaKnown RBP13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 LRRC19Q9H756 370 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 USH1CQ9Y6N9 552 aa13.4□□□□□ -0.26
PTPRN2-202ENST00000389416 LOC100653049A0A140TA62 436 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 KRT34O76011 436 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 DDX39BQ13838 428 aaKnown RBP13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 UGT3A1Q6NUS8 523 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 ERP27Q96DN0 273 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 SEMA3CQ99985 751 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 TBL1YQ9BQ87 522 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 PCDHGB4Q9UN71 923 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 ADAMTS5Q9UNA0 930 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 COL2A1P02458 1487 aaPredicted RBP13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 PAPSS1O43252 624 aaPredicted RBP13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 PIRTP0C851 137 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 TRADDQ15628 312 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 GLT6D1Q7Z4J2 308 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 PSTKQ8IV42 348 aaKnown RBP13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 GRIN3AQ8TCU5 1115 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 TWNKQ96RR1 684 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 GDF3Q9NR23 364 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 SLC13A4Q9UKG4 626 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 RNF112Q9ULX5 631 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 A0A1W2PQ45 241 aaPredicted RBP13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 A0A1W2PQY0 241 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 SKAP2O75563 359 aaPredicted RBP13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 GP5P40197 560 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 NPY2RP49146 381 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 SATB1Q01826 763 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 MTFR1Q15390 333 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 GRAMD1BQ3KR37 738 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 POM121L1PQ3SYA9 428 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 FNDC3BQ53EP0 1204 aaKnown RBP13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 ARMC12Q5T9G4 340 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 TSEN2Q8NCE0 465 aaKnown RBP13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 MTBPQ96DY7 904 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 BBS2Q9BXC9 721 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 PCYOX1Q9UHG3 505 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 R3HDM2Q9Y2K5 976 aaKnown RBP13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 CD151P48509 253 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 MAMDC4Q6UXC1 1216 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 LRRC34Q8IZ02 419 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 KLHL5Q96PQ7 755 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 OSGEPL1Q9H4B0 414 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 ECT2Q9H8V3 914 aa13.39□□□□□ -0.27
PTPRN2-202ENST00000389416 ERI2A8K979 691 aaKnown RBP13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 SLC9A3R1O14745 358 aaPredicted RBP13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 NRP1O14786 923 aa13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 GBE1Q04446 702 aa13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 SMARCB1Q12824 385 aa13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 FAM187BQ17R55 369 aa13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 CDCA2Q69YH5 1023 aaPredicted RBP13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 C17orf99Q6UX52 265 aa13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 ZCCHC9Q8N567 271 aaKnown RBP13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 ALLCQ8N6M5 410 aa13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 TDRD5Q8NAT2 981 aaKnown RBP13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 TMEM247A6NEH6 219 aa13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 H3BQF6 201 aa13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 IFI35P80217 286 aaPredicted RBP13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 BRMS1LQ5PSV4 323 aa13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 ZDHHC6Q9H6R6 413 aa13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 DCDC2Q9UHG0 476 aa13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 MYH1P12882 1939 aa13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 TCRBV7S2A1N4TA0A589 114 aa13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 SYN3O14994 580 aa13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 CYP1A1P04798 512 aaPredicted RBP13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 ERVK-10P10266 1014 aa13.38□□□□□ -0.27
PTPRN2-202ENST00000389416 PPP3CCP48454 512 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms