RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 VANGL2Q9ULK5 521 aa18.52■□□□□ 0.55
CD40-201ENST00000372276 RPS6KL1Q9Y6S9 549 aa18.52■□□□□ 0.55
CD40-201ENST00000372276 SYNJ2BP-COX16A0A087WUM0 186 aa18.51■□□□□ 0.55
CD40-201ENST00000372276 YJEFN3A6XGL0 299 aa18.51■□□□□ 0.55
CD40-201ENST00000372276 VGLL3A8MV65 326 aa18.51■□□□□ 0.55
CD40-201ENST00000372276 NRP1O14786 923 aa18.51■□□□□ 0.55
CD40-201ENST00000372276 GSC2O15499 205 aa18.51■□□□□ 0.55
CD40-201ENST00000372276 TIMM44O43615 452 aa18.51■□□□□ 0.55
CD40-201ENST00000372276 PLIN3O60664 434 aa18.51■□□□□ 0.55
CD40-201ENST00000372276 MAGEC1O60732 1142 aa18.51■□□□□ 0.55
CD40-201ENST00000372276 KLHL2O95198 593 aa18.51■□□□□ 0.55
CD40-201ENST00000372276 APOA4P06727 396 aa18.51■□□□□ 0.55
CD40-201ENST00000372276 EPHB2P29323 1055 aa18.51■□□□□ 0.55
CD40-201ENST00000372276 NKX3-2P78367 333 aa18.51■□□□□ 0.55
CD40-201ENST00000372276 ZRSR2Q15696 482 aaKnown RBP18.51■□□□□ 0.55
CD40-201ENST00000372276 DNAL1Q4LDG9 190 aa18.51■□□□□ 0.55
CD40-201ENST00000372276 CMPK2Q5EBM0 449 aa18.51■□□□□ 0.55
CD40-201ENST00000372276 NAPEPLDQ6IQ20 393 aa18.51■□□□□ 0.55
CD40-201ENST00000372276 TLDC1Q6P9B6 456 aa18.51■□□□□ 0.55
CD40-201ENST00000372276 ARID3BQ8IVW6 561 aaPredicted RBP18.51■□□□□ 0.55
CD40-201ENST00000372276 LZTR1Q8N653 840 aa18.51■□□□□ 0.55
CD40-201ENST00000372276 ZFP42Q96MM3 310 aa18.51■□□□□ 0.55
CD40-201ENST00000372276 TSGA13Q96PP4 275 aa18.51■□□□□ 0.55
CD40-201ENST00000372276 GAD1Q99259 594 aa18.51■□□□□ 0.55
CD40-201ENST00000372276 RNF19AQ9NV58 838 aa18.51■□□□□ 0.55
CD40-201ENST00000372276 ARL8BQ9NVJ2 186 aa18.51■□□□□ 0.55
CD40-201ENST00000372276 SYBUQ9NX95 663 aa18.51■□□□□ 0.55
CD40-201ENST00000372276 COX16Q9P0S2 106 aa18.51■□□□□ 0.55
CD40-201ENST00000372276 HBS1LQ9Y450 684 aaKnown RBP18.51■□□□□ 0.55
CD40-201ENST00000372276 L3MBTL1Q9Y468 752 aa18.51■□□□□ 0.55
CD40-201ENST00000372276 MFHAS1Q9Y4C4 1052 aa18.51■□□□□ 0.55
CD40-201ENST00000372276 LUC7L3O95232 432 aaKnown RBP18.5■□□□□ 0.55
CD40-201ENST00000372276 CYP2B6P20813 491 aa18.5■□□□□ 0.55
CD40-201ENST00000372276 TYK2P29597 1187 aa18.5■□□□□ 0.55
CD40-201ENST00000372276 GCKP35557 465 aa18.5■□□□□ 0.55
CD40-201ENST00000372276 MLH1P40692 756 aa18.5■□□□□ 0.55
CD40-201ENST00000372276 MAGEA12P43365 314 aa18.5■□□□□ 0.55
CD40-201ENST00000372276 POLD2P49005 469 aa18.5■□□□□ 0.55
CD40-201ENST00000372276 PRKAA2P54646 552 aa18.5■□□□□ 0.55
CD40-201ENST00000372276 BRMS1LQ5PSV4 323 aa18.5■□□□□ 0.55
CD40-201ENST00000372276 FAM171BQ6P995 826 aa18.5■□□□□ 0.55
CD40-201ENST00000372276 C4orf50Q6ZRC1 276 aa18.5■□□□□ 0.55
CD40-201ENST00000372276 LRRC49Q8IUZ0 686 aa18.5■□□□□ 0.55
CD40-201ENST00000372276 THEM5Q8N1Q8 247 aa18.5■□□□□ 0.55
CD40-201ENST00000372276 GSTCDQ8NEC7 633 aa18.5■□□□□ 0.55
CD40-201ENST00000372276 PIWIL2Q8TC59 973 aaKnown RBP18.5■□□□□ 0.55
CD40-201ENST00000372276 NSMCE1Q8WV22 266 aa18.5■□□□□ 0.55
CD40-201ENST00000372276 NDRG1Q92597 394 aaKnown RBP18.5■□□□□ 0.55
CD40-201ENST00000372276 NUDCD1Q96RS6 583 aa18.5■□□□□ 0.55
CD40-201ENST00000372276 CADM1Q9BY67 442 aaKnown RBP18.5■□□□□ 0.55
CD40-201ENST00000372276 SENP6Q9GZR1 1112 aaPredicted RBP18.5■□□□□ 0.55
CD40-201ENST00000372276 C1orf21Q9H246 121 aa18.5■□□□□ 0.55
CD40-201ENST00000372276 TAGLN3Q9UI15 199 aa18.5■□□□□ 0.55
CD40-201ENST00000372276 AAR2Q9Y312 384 aaKnown RBP18.5■□□□□ 0.55
CD40-201ENST00000372276 MYO18AQ92614 2054 aaKnown RBP18.49■□□□□ 0.55
CD40-201ENST00000372276 MYBPHLA2RUH7 354 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 ARL5CA6NH57 179 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 A8MUI8 341 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 HHLA1C9JL84 531 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 TPP1O14773 563 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 PEX11AO75192 247 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 ALDOAP04075 364 aaKnown RBP18.49■□□□□ 0.55
CD40-201ENST00000372276 ELF1P32519 619 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 CLCNKBP51801 687 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 PITX1P78337 314 aaPredicted RBP18.49■□□□□ 0.55
CD40-201ENST00000372276 PDE1CQ14123 709 aaPredicted RBP18.49■□□□□ 0.55
CD40-201ENST00000372276 UPP1Q16831 310 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 N4BP2L1Q5TBK1 243 aaPredicted RBP18.49■□□□□ 0.55
CD40-201ENST00000372276 C6orf163Q5TEZ5 329 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 KIAA0319Q5VV43 1072 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 MBLAC2Q68D91 279 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 KCTD11Q693B1 232 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 HFE2Q6ZVN8 426 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 CCDC117Q8IWD4 279 aaPredicted RBP18.49■□□□□ 0.55
CD40-201ENST00000372276 KLHDC8BQ8IXV7 354 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 DNAAF3Q8N9W5 541 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 ZMIZ2Q8NF64 920 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 LRRN4Q8WUT4 740 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 MYCBPQ99417 103 aaPredicted RBP18.49■□□□□ 0.55
CD40-201ENST00000372276 RBBP8Q99708 897 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 UPF3AQ9H1J1 476 aaKnown RBP18.49■□□□□ 0.55
CD40-201ENST00000372276 DMAP1Q9NPF5 467 aaPredicted RBP18.49■□□□□ 0.55
CD40-201ENST00000372276 STOML1Q9UBI4 398 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 OR12D3Q9UGF7 316 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 TLL2Q9Y6L7 1015 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 DOCK3Q8IZD9 2030 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 CAPN14A8MX76 684 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 SPECC1L-ADORA2AF8WAN1 911 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 FGF10O15520 208 aaPredicted RBP18.49■□□□□ 0.55
CD40-201ENST00000372276 USP17L7P0C7H9 530 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 HK2P52789 917 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 LIMK2P53671 638 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 AQP5P55064 265 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 SAPCD2Q86UD0 394 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 SERINC5Q86VE9 423 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 TEX9Q8N6V9 391 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 TEKT5Q96M29 485 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 HAPLN3Q96S86 360 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 MECRQ9BV79 373 aa18.49■□□□□ 0.55
CD40-201ENST00000372276 ZFYVE28Q9HCC9 887 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms