RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 ACDQ96AP0 544 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 FAM20AQ96MK3 541 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 CGREF1Q99674 301 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 RAB6CQ9H0N0 254 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 EHD1Q9H4M9 534 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 XAB2Q9HCS7 855 aaKnown RBP8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 TBC1D22BQ9NU19 505 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 ST14Q9Y5Y6 855 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 V9GYQ6 96 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 USP34Q70CQ2 3546 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 hCG_1818297A0A087WSY0 165 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 FAM47E-STBD1D6RA91 191 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 DCXO43602 365 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 TSPAN3O60637 253 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 KCNA4P22459 653 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 TKTP29401 623 aaKnown RBP8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 SH3BGRP55822 239 aaPredicted RBP8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 EIF3EP60228 445 aaKnown RBP8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 TAF5Q15542 800 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 UGCGQ16739 394 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 NHSL2Q5HYW2 709 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 DRICH1Q6PGQ1 229 aaPredicted RBP8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 ATP6V1E2Q96A05 226 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 LENG8Q96PV6 779 aaPredicted RBP8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 OR52B2Q96RD2 323 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 NAP1L4Q99733 375 aaKnown RBP8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 NANOGQ9H9S0 305 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 UBP1Q9NZI7 540 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 AGO2Q9UKV8 859 aaKnown RBP8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 SHOC2Q9UQ13 582 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 SSX2IPQ9Y2D8 614 aa8.96□□□□□ -0.98
SMARCA1-203ENST00000371123 IGLV3-22A0A075B6J6 115 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 GOLGA8QA0A0J9YX86 632 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 ARHGAP10A1A4S6 786 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 GOLGA8OA6NCC3 632 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 GOLGA8NF8WBI6 632 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 P4HBP07237 508 aaKnown RBP8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 CDH3P22223 829 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 IL1R2P27930 398 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 ADORA2BP29275 332 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 CDKN2BP42772 138 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 PLIN5Q00G26 463 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 WASHC5Q12768 1159 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 NME3Q13232 169 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 STILQ15468 1287 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 ZBTB41Q5SVQ8 909 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 GJC2Q5T442 439 aaPredicted RBP8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 CENPUQ71F23 418 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 SETD3Q86TU7 594 aaPredicted RBP8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 PDIK1LQ8N165 341 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 MPP5Q8N3R9 675 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 ZNF516Q92618 1163 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 PGBD4Q96DM1 585 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 FBXL18Q96ME1 805 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 ALPK1Q96QP1 1244 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 MTMR12Q9C0I1 747 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 WWP1Q9H0M0 922 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 CAAP1Q9H8G2 361 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 ZNF358Q9NW07 568 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 C6orf203Q9P0P8 240 aaPredicted RBP8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 ERGIC3Q9Y282 383 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 GPSM3Q9Y4H4 160 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 PCDHGA8Q9Y5G5 932 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 NUMA1Q14980 2115 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 LOC105371267A0A1B0GV96 52 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 SOCS2O14508 198 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 USP12O75317 370 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 JUNP05412 331 aaKnown RBP8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 EPHX2P34913 555 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 RPL10AP62906 217 aaKnown RBP8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 IKBKEQ14164 716 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 PCLAFQ15004 111 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 LSM12Q3MHD2 195 aaKnown RBP8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 GPAT2Q6NUI2 795 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 NPNTQ6UXI9 565 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 ALOXE3Q9BYJ1 711 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 SEC24DO94855 1032 aaPredicted RBP8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 KCNH1O95259 989 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 PGK2P07205 417 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 COX4I1P13073 169 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 NPTX2P47972 431 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 TMED10P49755 219 aaKnown RBP8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 HSD17B4P51659 736 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 MCCD1P59942 119 aaPredicted RBP8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 ITKQ08881 620 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 STX3Q13277 289 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 OXA1LQ15070 435 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 LDLRAP1Q5SW96 308 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 SLC9A9Q8IVB4 645 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 TTLL6Q8N841 843 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 BHLHE22Q8NFJ8 381 aaPredicted RBP8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 EXD1Q8NHP7 514 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 LRTOMTQ8WZ04 291 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 CASP10Q92851 521 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 CTRCQ99895 268 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 GLT8D2Q9H1C3 349 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 RPAP3Q9H6T3 665 aaPredicted RBP8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 TMEM206Q9H813 350 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 RIC8BQ9NVN3 520 aa8.95□□□□□ -0.98
SMARCA1-203ENST00000371123 HES2Q9Y543 173 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms