RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 ADGRA2Q96PE1 1338 aa8.65□□□□□ -1.03
PTPRK-206ENST00000368215 SLX4Q8IY92 1834 aa8.65□□□□□ -1.03
PTPRK-206ENST00000368215 NCF1BA6NI72 391 aaPredicted RBP8.65□□□□□ -1.03
PTPRK-206ENST00000368215 NCF1CA8MVU1 366 aaPredicted RBP8.65□□□□□ -1.03
PTPRK-206ENST00000368215 METTL18O95568 372 aa8.65□□□□□ -1.03
PTPRK-206ENST00000368215 PROCP04070 461 aa8.65□□□□□ -1.03
PTPRK-206ENST00000368215 NCF1P14598 390 aaPredicted RBP8.65□□□□□ -1.03
PTPRK-206ENST00000368215 ADRA1BP35368 520 aa8.65□□□□□ -1.03
PTPRK-206ENST00000368215 CRYBB1P53674 252 aaPredicted RBP8.65□□□□□ -1.03
PTPRK-206ENST00000368215 NAGLUP54802 743 aa8.65□□□□□ -1.03
PTPRK-206ENST00000368215 GPX6P59796 221 aa8.65□□□□□ -1.03
PTPRK-206ENST00000368215 LILRA4P59901 499 aa8.65□□□□□ -1.03
PTPRK-206ENST00000368215 MRPS6P82932 125 aaKnown RBP8.65□□□□□ -1.03
PTPRK-206ENST00000368215 MAP3K10Q02779 954 aa8.65□□□□□ -1.03
PTPRK-206ENST00000368215 FLOT2Q14254 428 aa8.65□□□□□ -1.03
PTPRK-206ENST00000368215 PPM1JQ5JR12 505 aa8.65□□□□□ -1.03
PTPRK-206ENST00000368215 RARS2Q5T160 578 aaKnown RBP8.65□□□□□ -1.03
PTPRK-206ENST00000368215 DPY19L2P1Q6NXN4 242 aa8.65□□□□□ -1.03
PTPRK-206ENST00000368215 PACS1Q6VY07 963 aa8.65□□□□□ -1.03
PTPRK-206ENST00000368215 KYAT3Q6YP21 454 aaKnown RBP8.65□□□□□ -1.03
PTPRK-206ENST00000368215 NUP93Q8N1F7 819 aa8.65□□□□□ -1.03
PTPRK-206ENST00000368215 NIPA2Q8N8Q9 360 aa8.65□□□□□ -1.03
PTPRK-206ENST00000368215 NAT8LQ8N9F0 302 aa8.65□□□□□ -1.03
PTPRK-206ENST00000368215 PIWIL2Q8TC59 973 aaKnown RBP8.65□□□□□ -1.03
PTPRK-206ENST00000368215 NMUR2Q9GZQ4 415 aa8.65□□□□□ -1.03
PTPRK-206ENST00000368215 RNPEPL1Q9HAU8 725 aa8.65□□□□□ -1.03
PTPRK-206ENST00000368215 TMPRSS4Q9NRS4 437 aa8.65□□□□□ -1.03
PTPRK-206ENST00000368215 SLC17A6Q9P2U8 582 aa8.65□□□□□ -1.03
PTPRK-206ENST00000368215 SFMBT1Q9UHJ3 866 aa8.65□□□□□ -1.03
PTPRK-206ENST00000368215 CYTH4Q9UIA0 394 aa8.65□□□□□ -1.03
PTPRK-206ENST00000368215 SMIM35A0A1B0GVV1 85 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 GSTA4O15217 222 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 TSPAN3O60637 253 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 RHOBTB1O94844 696 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 F7P08709 466 aaPredicted RBP8.64□□□□□ -1.03
PTPRK-206ENST00000368215 TFE3P19532 575 aaPredicted RBP8.64□□□□□ -1.03
PTPRK-206ENST00000368215 PTPN7P35236 360 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 SLC20A2Q08357 652 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 TCEAL1Q15170 157 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 CYTH1Q15438 398 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 RAB6CQ53S08 254 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 MARC1Q5VT66 337 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 CLNKQ7Z7G1 428 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 UNC5BQ8IZJ1 945 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 GPR152Q8TDT2 470 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 INPP5DQ92835 1189 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 SYT17Q9BSW7 474 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 RAB6CQ9H0N0 254 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 BATF3Q9NR55 127 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 ARHGEF4Q9NR80 690 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 KCNK4Q9NYG8 393 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 ATXN2Q99700 1313 aaKnown RBP8.64□□□□□ -1.03
PTPRK-206ENST00000368215 MAST2Q6P0Q8 1798 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 SCAMP3O14828 347 aaKnown RBP8.64□□□□□ -1.03
PTPRK-206ENST00000368215 KRT36O76013 467 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 APOA4P06727 396 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 HOXD10P28358 340 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 CRYMQ14894 314 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 NBPF20Q3BBV1 942 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 ZRANB3Q5FWF4 1079 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 WASHC2DQ5SRD0 308 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 ZNF618Q5T7W0 954 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 AGAP9Q5VTM2 703 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 SDCCAG3Q96C92 435 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 PEBP4Q96S96 227 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 OMDQ99983 421 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 CENPKQ9BS16 269 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 TRHDEQ9UKU6 1024 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 NENFQ9UMX5 172 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 SOX13Q9UN79 622 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 CHKBQ9Y259 395 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 COL1A2P08123 1366 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 COL2A1P02458 1487 aaPredicted RBP8.64□□□□□ -1.03
PTPRK-206ENST00000368215 LAMB1P07942 1786 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 ANGPT2O15123 496 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 MSI1O43347 362 aaKnown RBP8.64□□□□□ -1.03
PTPRK-206ENST00000368215 CD151P48509 253 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 TBX4P57082 545 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 MAXP61244 160 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 TBL3Q12788 808 aaKnown RBP8.64□□□□□ -1.03
PTPRK-206ENST00000368215 CTBP1Q13363 440 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 TBCCQ15814 346 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 FAM110CQ1W6H9 321 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 FAM171A1Q5VUB5 890 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 C16orf89Q6UX73 402 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 IZUMO2Q6UXV1 221 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 STRADAQ7RTN6 431 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 C10orf107Q8IVU9 208 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 TMEM86AQ8N2M4 240 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 MPP5Q8N3R9 675 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 APBB2Q92870 758 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 ULK4Q96C45 1275 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 ASIC4Q96FT7 647 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 MARK4Q96L34 752 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 TBL1YQ9BQ87 522 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 UBE2OQ9C0C9 1292 aaKnown RBP8.64□□□□□ -1.03
PTPRK-206ENST00000368215 MPP6Q9NZW5 540 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 DSEQ9UL01 958 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 PLLPQ9Y342 182 aa8.64□□□□□ -1.03
PTPRK-206ENST00000368215 KIAA1551Q9HCM1 1747 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms