RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 DGAT2L7PQ6IED9 249 aa6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 Q6ZNX1 250 aa6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 RINLQ6ZS11 566 aa6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 Q6ZWC4 215 aa6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 SIRT6Q8N6T7 355 aa6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 ZNF503Q96F45 646 aa6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 REXO5Q96IC2 774 aaKnown RBP6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 TWNKQ96RR1 684 aa6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 SEC62Q99442 399 aaKnown RBP6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 ABHD16BQ9H3Z7 469 aa6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 ARHGEF3Q9NR81 526 aa6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 RXFP3Q9NSD7 469 aa6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 DERAQ9Y315 318 aa6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 UBE2J1Q9Y385 318 aaPredicted RBP6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 RGPD2P0DJD1 1756 aa6.28□□□□□ -1.4
RNU4-39P-201ENST00000362455 MAP2P11137 1827 aaKnown RBP6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 C5P01031 1676 aa6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 CES2O00748 559 aa6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 HOXC11O43248 304 aaPredicted RBP6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 TFRCP02786 760 aaKnown RBP6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 DLDP09622 509 aaKnown RBP6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 TNNT2P45379 298 aaPredicted RBP6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 CCR5P51681 352 aa6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 RBM5P52756 815 aaKnown RBP eCLIP6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 FAM3BP58499 235 aaPredicted RBP6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 BLOC1S1P78537 153 aa6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 G3BP1Q13283 466 aaKnown RBP eCLIP6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 PDCLQ13371 301 aa6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 FOXE3Q13461 319 aa6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 AAK1Q2M2I8 961 aa6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 FNDC7Q5VTL7 733 aa6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 KAZNQ674X7 775 aa6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 ANKRD40Q6AI12 368 aa6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 PTCHD4Q6ZW05 846 aa6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 PARS2Q7L3T8 475 aaKnown RBP6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 ZNF551Q7Z340 670 aaPredicted RBP6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 SLC44A3Q8N4M1 653 aa6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 RP9Q8TA86 221 aaKnown RBP6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 NPIPB3Q92617 1050 aa6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 PRR11Q96HE9 360 aaPredicted RBP6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 SAP30LQ9HAJ7 183 aa6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 KCNK9Q9NPC2 374 aa6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 MGAT4CQ9UBM8 478 aa6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 RRP7AQ9Y3A4 280 aaKnown RBP6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 PCDHB2Q9Y5E7 798 aa6.27□□□□□ -1.41
RNU4-39P-201ENST00000362455 KCPQ6ZWJ8 1503 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 CCDC187A0A096LP49 1063 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 TMPRSS11DO60235 418 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 URI1O94763 535 aaPredicted RBP6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 TJP3O95049 919 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 XBP1P17861 261 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 TNFAIP3P21580 790 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 MMP8P22894 467 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 ITPKBP27987 946 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 CYP2C18P33260 490 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 RFC4P35249 363 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 MCM2P49736 904 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 PSG6Q00889 435 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 RNASELQ05823 741 aaKnown RBP6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 LMOD3Q0VAK6 560 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 DDX10Q13206 875 aaKnown RBP6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 TRPC3Q13507 836 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 DNASE1L3Q13609 305 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 SIM2Q14190 667 aaPredicted RBP6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 PTPAQ15257 358 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 DLGAP5Q15398 846 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 MAPRE1Q15691 268 aaKnown RBP6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 TBRG1Q3YBR2 411 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 SPATS1Q496A3 300 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 PLAC9Q5JTB6 97 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 MIIPQ5JXC2 388 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 MAP3K21Q5TCX8 1036 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 RETSATQ6NUM9 610 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 C16orf89Q6UX73 402 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 USP51Q70EK9 711 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 HEATR4Q86WZ0 1026 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 LCORLQ8N3X6 602 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 FAR2Q96K12 515 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 NOD2Q9HC29 1040 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 UBN1Q9NPG3 1134 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 TMEM160Q9NX00 188 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 DLL3Q9NYJ7 618 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 SLC13A4Q9UKG4 626 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 AMFRQ9UKV5 643 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 RAB21Q9UL25 225 aa6.26□□□□□ -1.41
RNU4-39P-201ENST00000362455 MAST3O60307 1309 aa6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 USP42Q9H9J4 1324 aaKnown RBP6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 KIAA1551Q9HCM1 1747 aa6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 STX16-NPEPL1H3BU86 382 aa6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 STX16O14662 325 aa6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 HEXIM1O94992 359 aaKnown RBP6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 CNPP09543 421 aaKnown RBP6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 PEPDP12955 493 aa6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 ZNF37AP17032 561 aaPredicted RBP6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 ENGP17813 658 aa6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 LIFRP42702 1097 aa6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 DIO1P49895 249 aa6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 TUBP50607 506 aa6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 CHRNDQ07001 517 aa6.25□□□□□ -1.41
RNU4-39P-201ENST00000362455 LSM12Q3MHD2 195 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms