RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 VSIG10LQ86VR7 867 aa18.21■□□□□ 0.51
SMG5-201ENST00000361813 RP9Q8TA86 221 aaKnown RBP18.21■□□□□ 0.51
SMG5-201ENST00000361813 MAGEE2Q8TD90 523 aaPredicted RBP18.21■□□□□ 0.51
SMG5-201ENST00000361813 NSMCE2Q96MF7 247 aa18.21■□□□□ 0.51
SMG5-201ENST00000361813 TUBGCP5Q96RT8 1024 aa18.21■□□□□ 0.51
SMG5-201ENST00000361813 SLC7A8Q9UHI5 535 aa18.21■□□□□ 0.51
SMG5-201ENST00000361813 SNCAIPQ9Y6H5 919 aa18.21■□□□□ 0.51
SMG5-201ENST00000361813 VWA5AO00534 786 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 WDR47O94967 919 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 CCDC130P13994 396 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 AQP4P55087 323 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 MAP3K7CLP57077 242 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 CNPY1Q3B7I2 92 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 EFL1Q7Z2Z2 1120 aaKnown RBP18.2■□□□□ 0.5
SMG5-201ENST00000361813 SPATA2LQ8IUW3 424 aaPredicted RBP18.2■□□□□ 0.5
SMG5-201ENST00000361813 C9orf16Q9BUW7 83 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 UTP6Q9NYH9 597 aaKnown RBP18.2■□□□□ 0.5
SMG5-201ENST00000361813 TMCO1Q9UM00 188 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 GNEQ9Y223 722 aaKnown RBP18.2■□□□□ 0.5
SMG5-201ENST00000361813 NFAT5O94916 1531 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 DYNC1LI2O43237 492 aaPredicted RBP18.2■□□□□ 0.5
SMG5-201ENST00000361813 TGFB2P61812 414 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 YWHAZP63104 245 aaKnown RBP18.2■□□□□ 0.5
SMG5-201ENST00000361813 UBE3AQ05086 875 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 LY6KQ17RY6 165 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 MRNIPQ6NTE8 343 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 GIPC3Q8TF64 312 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 CCDC28BQ9BUN5 200 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 BDH2Q9BUT1 245 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 SNX15Q9NRS6 342 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 FSTL1Q12841 308 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 DPY19L2Q6NUT2 758 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 NOTUMQ6P988 496 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 HORMAD1Q86X24 394 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 OR6J1Q8NGC5 347 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 EDEM1Q92611 657 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 FAM210AQ96ND0 272 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 APOL5Q9BWW9 433 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 ELP3Q9H9T3 547 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 RBM22Q9NW64 420 aaKnown RBP eCLIP18.2■□□□□ 0.5
SMG5-201ENST00000361813 IGLV3-22A0A075B6J6 115 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 PRKAA2P54646 552 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 GDF10P55107 478 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 NAB1Q13506 487 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 FAM182AQ5T1J6 154 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 C6orf52Q5T4I8 152 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 PPP1R2P1Q96PQ5 205 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 DGCR6LQ9BY27 220 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 PLGRKTQ9HBL7 147 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 RNF19AQ9NV58 838 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 ITGA11Q9UKX5 1188 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 DMTF1Q9Y222 760 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 LRRC42Q9Y546 428 aa18.2■□□□□ 0.5
SMG5-201ENST00000361813 CFAP99D6REC4 459 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 CRHR1P34998 444 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 TKTL1P51854 596 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 MIER2Q8N344 545 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 GLIS1Q8NBF1 620 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 SSU72Q9NP77 194 aaKnown RBP18.19■□□□□ 0.5
SMG5-201ENST00000361813 MID1IP1Q9NPA3 183 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 PCDHGB4Q9UN71 923 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 SLC30A1Q9Y6M5 507 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 ATP6AP2A0A1C7CYW4 349 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 TRIM38O00635 465 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 ATP6AP2O75787 350 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 CYP2C9P11712 490 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 PSMB9P28065 219 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 CNTN2Q02246 1040 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 NOMO1Q15155 1222 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 GPR107Q5VW38 600 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 LRRC8DQ7L1W4 858 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 SPATA6LQ8N4H0 392 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 BSNDQ8WZ55 320 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 DNAJC1Q96KC8 554 aaKnown RBP18.19■□□□□ 0.5
SMG5-201ENST00000361813 TRIM54Q9BYV2 358 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 CAB39LQ9H9S4 337 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 LNPEPQ9UIQ6 1025 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 KPNA4O00629 521 aaPredicted RBP18.19■□□□□ 0.5
SMG5-201ENST00000361813 HOXD13P35453 343 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 NEK3P51956 506 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 IL5RAQ01344 420 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 CHSY1Q86X52 802 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 TAGAPQ8N103 731 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 MYO1HQ8N1T3 1032 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 CPXM1Q96SM3 734 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 NPAS2Q99743 824 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 PRDM12Q9H4Q4 367 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 CDHR5Q9HBB8 845 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 TMEM165Q9HC07 324 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 PRPF19Q9UMS4 504 aaKnown RBP18.19■□□□□ 0.5
SMG5-201ENST00000361813 RAP2CQ9Y3L5 183 aa18.19■□□□□ 0.5
SMG5-201ENST00000361813 F9P00740 461 aa18.18■□□□□ 0.5
SMG5-201ENST00000361813 CST3P01034 146 aaPredicted RBP18.18■□□□□ 0.5
SMG5-201ENST00000361813 ACAT1P24752 427 aaKnown RBP18.18■□□□□ 0.5
SMG5-201ENST00000361813 PCSK1P29120 753 aa18.18■□□□□ 0.5
SMG5-201ENST00000361813 NPY2RP49146 381 aa18.18■□□□□ 0.5
SMG5-201ENST00000361813 BNIPLQ7Z465 357 aa18.18■□□□□ 0.5
SMG5-201ENST00000361813 FAM47BQ8NA70 645 aa18.18■□□□□ 0.5
SMG5-201ENST00000361813 KCTD4Q8WVF5 259 aa18.18■□□□□ 0.5
SMG5-201ENST00000361813 ASIC4Q96FT7 647 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms