RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 HDCP19113 662 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 EPHB2P29323 1055 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 KPNA1P52294 538 aaPredicted RBP15.12■□□□□ 0.01
CXCL12-201ENST00000343575 GDF10P55107 478 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 COG7P83436 770 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 GUCY2DQ02846 1103 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 PAFAH1B3Q15102 231 aaKnown RBP15.12■□□□□ 0.01
CXCL12-201ENST00000343575 PRSS36Q5K4E3 855 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 MAATS1Q7Z4T9 603 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 C12orf76Q8N812 135 aaPredicted RBP15.12■□□□□ 0.01
CXCL12-201ENST00000343575 OLFM3Q96PB7 478 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 CCT8L2Q96SF2 557 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 EPAS1Q99814 870 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 PRKD2Q9BZL6 878 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 ATXN3LQ9H3M9 355 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 TRPC7Q9HCX4 862 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 SMPD4Q9NXE4 827 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 ZDHHC7Q9NXF8 308 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 DOCK4Q8N1I0 1966 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 IGLV3-10A0A075B6K4 115 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 E9PAM4 449 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 GLP2RO95838 553 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 ITGAVP06756 1048 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 RBP3P10745 1247 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 IVDP26440 423 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 SLC6A4P31645 630 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 ZNF135P52742 658 aaPredicted RBP15.12■□□□□ 0.01
CXCL12-201ENST00000343575 NRLP54845 237 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 EIF3EP60228 445 aaKnown RBP15.12■□□□□ 0.01
CXCL12-201ENST00000343575 IFFO1Q0D2I5 559 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 AUHQ13825 339 aaKnown RBP15.12■□□□□ 0.01
CXCL12-201ENST00000343575 FAM133BQ5BKY9 247 aaKnown RBP15.12■□□□□ 0.01
CXCL12-201ENST00000343575 NUGGCQ68CJ6 796 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 DUPD1Q68J44 220 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 FBXL22Q6P050 247 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 CCDC121Q6ZUS5 278 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 ZC3H18Q86VM9 953 aaKnown RBP15.12■□□□□ 0.01
CXCL12-201ENST00000343575 DDX42Q86XP3 938 aaKnown RBP eCLIP15.12■□□□□ 0.01
CXCL12-201ENST00000343575 ATP6V0D2Q8N8Y2 350 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 GIMAP7Q8NHV1 300 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 CASKIN2Q8WXE0 1202 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 IGSF8Q969P0 613 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 NACA2Q9H009 215 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 USP29Q9HBJ7 922 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 EPB41L5Q9HCM4 733 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 KLC4Q9NSK0 619 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 NDFIP2Q9NV92 336 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 MPP6Q9NZW5 540 aa15.12■□□□□ 0.01
CXCL12-201ENST00000343575 FAM187AA6NFU0 413 aa15.11■□□□□ 0.01
CXCL12-201ENST00000343575 TP73O15350 636 aa15.11■□□□□ 0.01
CXCL12-201ENST00000343575 POU2F2P09086 479 aa15.11■□□□□ 0.01
CXCL12-201ENST00000343575 MBL2P11226 248 aaPredicted RBP15.11■□□□□ 0.01
CXCL12-201ENST00000343575 ZFXP17010 805 aaPredicted RBP15.11■□□□□ 0.01
CXCL12-201ENST00000343575 CDC25CP30307 473 aa15.11■□□□□ 0.01
CXCL12-201ENST00000343575 PREPLQ4J6C6 727 aaPredicted RBP15.11■□□□□ 0.01
CXCL12-201ENST00000343575 RAP1GAP2Q684P5 730 aa15.11■□□□□ 0.01
CXCL12-201ENST00000343575 C6orf89Q6UWU4 347 aa15.11■□□□□ 0.01
CXCL12-201ENST00000343575 GRASPQ7Z6J2 395 aaPredicted RBP15.11■□□□□ 0.01
CXCL12-201ENST00000343575 UNC45BQ8IWX7 931 aa15.11■□□□□ 0.01
CXCL12-201ENST00000343575 ALLCQ8N6M5 410 aa15.11■□□□□ 0.01
CXCL12-201ENST00000343575 MRPS31Q92665 395 aaKnown RBP15.11■□□□□ 0.01
CXCL12-201ENST00000343575 PLD4Q96BZ4 506 aa15.11■□□□□ 0.01
CXCL12-201ENST00000343575 ERP44Q9BS26 406 aa15.11■□□□□ 0.01
CXCL12-201ENST00000343575 FRMD8P1Q9BZ68 369 aaPredicted RBP15.11■□□□□ 0.01
CXCL12-201ENST00000343575 ZNF576Q9H609 170 aa15.11■□□□□ 0.01
CXCL12-201ENST00000343575 PRDM16Q9HAZ2 1276 aa15.11■□□□□ 0.01
CXCL12-201ENST00000343575 ZNF212Q9UDV6 495 aa15.11■□□□□ 0.01
CXCL12-201ENST00000343575 VANGL2Q9ULK5 521 aa15.11■□□□□ 0.01
CXCL12-201ENST00000343575 PRRC2BQ5JSZ5 2229 aaKnown RBP15.1■□□□□ 0.01
CXCL12-201ENST00000343575 DRGXA6NNA5 263 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 DAPK3O43293 454 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 RASSF9O75901 435 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 ECEL1O95672 775 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 MYZAPP0CAP1 466 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 ETS1P14921 441 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 ECHS1P30084 290 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 NR2C2P49116 596 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 CARSP49589 748 aaKnown RBP15.1■□□□□ 0.01
CXCL12-201ENST00000343575 SLC7A9P82251 487 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 TEAD2Q15562 447 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 ALFQ53S48 1182 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 AGBL2Q5U5Z8 902 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 DENND1CQ8IV53 801 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 RUNDC3BQ96NL0 473 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 TMBIM4Q9HC24 238 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 AGO1Q9UL18 857 aaKnown RBP15.1■□□□□ 0.01
CXCL12-201ENST00000343575 NFU1Q9UMS0 254 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 ZNF148Q9UQR1 794 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 CPQQ9Y646 472 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.1■□□□□ 0.01
CXCL12-201ENST00000343575 ACSL4O60488 711 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 CNTN5O94779 1100 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 KRT14P02533 472 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 ZSCAN5DPP0CG00 497 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 IRF1P10914 325 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 CORO1AP31146 461 aaKnown RBP15.1■□□□□ 0.01
CXCL12-201ENST00000343575 ATP1A2P50993 1020 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 HYAL1Q12794 435 aa15.1■□□□□ 0.01
CXCL12-201ENST00000343575 TRIP13Q15645 432 aaPredicted RBP15.1■□□□□ 0.01
CXCL12-201ENST00000343575 C5orf22Q49AR2 442 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms