RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 ESPNB1AK53 854 aa19.23■□□□□ 0.67
TSSC4-201ENST00000333256 H0Y626 953 aa19.23■□□□□ 0.67
TSSC4-201ENST00000333256 RHOQP17081 205 aa19.23■□□□□ 0.67
TSSC4-201ENST00000333256 CASQ1P31415 396 aa19.23■□□□□ 0.67
TSSC4-201ENST00000333256 HCAR3P49019 387 aa19.23■□□□□ 0.67
TSSC4-201ENST00000333256 GAB4Q2WGN9 574 aa19.23■□□□□ 0.67
TSSC4-201ENST00000333256 RNF135Q8IUD6 432 aa19.23■□□□□ 0.67
TSSC4-201ENST00000333256 PQLC3Q8N755 202 aa19.23■□□□□ 0.67
TSSC4-201ENST00000333256 OR52K2Q8NGK3 314 aa19.23■□□□□ 0.67
TSSC4-201ENST00000333256 ZNF592Q92610 1267 aa19.23■□□□□ 0.67
TSSC4-201ENST00000333256 FAF2Q96CS3 445 aa19.23■□□□□ 0.67
TSSC4-201ENST00000333256 CATSPERBQ9H7T0 1116 aa19.23■□□□□ 0.67
TSSC4-201ENST00000333256 HEBP1Q9NRV9 189 aa19.23■□□□□ 0.67
TSSC4-201ENST00000333256 RCOR3Q9P2K3 495 aaPredicted RBP19.23■□□□□ 0.67
TSSC4-201ENST00000333256 ZNF212Q9UDV6 495 aa19.23■□□□□ 0.67
TSSC4-201ENST00000333256 SNX12Q9UMY4 172 aa19.23■□□□□ 0.67
TSSC4-201ENST00000333256 DCLK1O15075 740 aa19.22■□□□□ 0.67
TSSC4-201ENST00000333256 FGF10O15520 208 aaPredicted RBP19.22■□□□□ 0.67
TSSC4-201ENST00000333256 HOXC11O43248 304 aaPredicted RBP19.22■□□□□ 0.67
TSSC4-201ENST00000333256 CLDN11O75508 207 aa19.22■□□□□ 0.67
TSSC4-201ENST00000333256 LUC7L3O95232 432 aaKnown RBP19.22■□□□□ 0.67
TSSC4-201ENST00000333256 OR1E1P30953 314 aa19.22■□□□□ 0.67
TSSC4-201ENST00000333256 GJA4P35212 333 aa19.22■□□□□ 0.67
TSSC4-201ENST00000333256 ZNF135P52742 658 aaPredicted RBP19.22■□□□□ 0.67
TSSC4-201ENST00000333256 CDH4P55283 916 aa19.22■□□□□ 0.67
TSSC4-201ENST00000333256 NR1H3Q13133 447 aa19.22■□□□□ 0.67
TSSC4-201ENST00000333256 CDH18Q13634 790 aa19.22■□□□□ 0.67
TSSC4-201ENST00000333256 TAZQ16635 292 aa19.22■□□□□ 0.67
TSSC4-201ENST00000333256 MPP7Q5T2T1 576 aa19.22■□□□□ 0.67
TSSC4-201ENST00000333256 TTC39BQ5VTQ0 682 aaPredicted RBP19.22■□□□□ 0.67
TSSC4-201ENST00000333256 CCDC33Q8N5R6 958 aa19.22■□□□□ 0.67
TSSC4-201ENST00000333256 NPWQ8N729 165 aa19.22■□□□□ 0.67
TSSC4-201ENST00000333256 RTL3Q8N8U3 475 aaKnown RBP19.22■□□□□ 0.67
TSSC4-201ENST00000333256 COG1Q8WTW3 980 aa19.22■□□□□ 0.67
TSSC4-201ENST00000333256 CHFRQ96EP1 664 aa19.22■□□□□ 0.67
TSSC4-201ENST00000333256 OSBPL9Q96SU4 736 aa19.22■□□□□ 0.67
TSSC4-201ENST00000333256 MAK16Q9BXY0 300 aaKnown RBP19.22■□□□□ 0.67
TSSC4-201ENST00000333256 OSBPL8Q9BZF1 889 aa19.22■□□□□ 0.67
TSSC4-201ENST00000333256 CARD9Q9H257 536 aa19.22■□□□□ 0.67
TSSC4-201ENST00000333256 TMEM248Q9NWD8 314 aa19.22■□□□□ 0.67
TSSC4-201ENST00000333256 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.21■□□□□ 0.67
TSSC4-201ENST00000333256 ZNF185O15231 689 aa19.21■□□□□ 0.67
TSSC4-201ENST00000333256 CEP104O60308 925 aa19.21■□□□□ 0.67
TSSC4-201ENST00000333256 MAP3K6O95382 1288 aa19.21■□□□□ 0.67
TSSC4-201ENST00000333256 SRFP11831 508 aa19.21■□□□□ 0.67
TSSC4-201ENST00000333256 HTR7P34969 479 aa19.21■□□□□ 0.67
TSSC4-201ENST00000333256 SLC6A11P48066 632 aa19.21■□□□□ 0.67
TSSC4-201ENST00000333256 MESP2Q0VG99 397 aa19.21■□□□□ 0.67
TSSC4-201ENST00000333256 ZNF177Q13360 481 aaPredicted RBP19.21■□□□□ 0.67
TSSC4-201ENST00000333256 ASTLQ6HA08 431 aaPredicted RBP19.21■□□□□ 0.67
TSSC4-201ENST00000333256 CHST9Q7L1S5 443 aa19.21■□□□□ 0.67
TSSC4-201ENST00000333256 TP53INP2Q8IXH6 220 aa19.21■□□□□ 0.67
TSSC4-201ENST00000333256 GJD3Q8N144 294 aa19.21■□□□□ 0.67
TSSC4-201ENST00000333256 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.21■□□□□ 0.67
TSSC4-201ENST00000333256 UBE2Q2Q8WVN8 375 aa19.21■□□□□ 0.67
TSSC4-201ENST00000333256 CELF6Q96J87 481 aaKnown RBP19.21■□□□□ 0.67
TSSC4-201ENST00000333256 SAE1Q9UBE0 346 aaPredicted RBP19.21■□□□□ 0.67
TSSC4-201ENST00000333256 CACNG3O60359 315 aa19.2■□□□□ 0.66
TSSC4-201ENST00000333256 CST8O60676 142 aa19.2■□□□□ 0.66
TSSC4-201ENST00000333256 COPS2P61201 443 aa19.2■□□□□ 0.66
TSSC4-201ENST00000333256 SEL1L2Q5TEA6 688 aa19.2■□□□□ 0.66
TSSC4-201ENST00000333256 PAPD7Q5XG87 772 aaKnown RBP19.2■□□□□ 0.66
TSSC4-201ENST00000333256 NCBP2-AS2Q69YL0 99 aa19.2■□□□□ 0.66
TSSC4-201ENST00000333256 CXorf57Q6NSI4 855 aaKnown RBP19.2■□□□□ 0.66
TSSC4-201ENST00000333256 TMCO3Q6UWJ1 677 aa19.2■□□□□ 0.66
TSSC4-201ENST00000333256 ADAT2Q7Z6V5 191 aaKnown RBP19.2■□□□□ 0.66
TSSC4-201ENST00000333256 HAUS1Q96CS2 278 aa19.2■□□□□ 0.66
TSSC4-201ENST00000333256 MS4A14Q96JA4 679 aa19.2■□□□□ 0.66
TSSC4-201ENST00000333256 DNAJC17Q9NVM6 304 aaKnown RBP19.2■□□□□ 0.66
TSSC4-201ENST00000333256 SMARCAL1Q9NZC9 954 aa19.2■□□□□ 0.66
TSSC4-201ENST00000333256 SORCS3Q9UPU3 1222 aa19.2■□□□□ 0.66
TSSC4-201ENST00000333256 COL4A3Q01955 1670 aa19.2■□□□□ 0.66
TSSC4-201ENST00000333256 TCRBV7S2A1N4TA0A589 114 aa19.2■□□□□ 0.66
TSSC4-201ENST00000333256 TULP3O75386 442 aa19.2■□□□□ 0.66
TSSC4-201ENST00000333256 CETN2P41208 172 aa19.2■□□□□ 0.66
TSSC4-201ENST00000333256 PPP2R5EQ16537 467 aa19.2■□□□□ 0.66
TSSC4-201ENST00000333256 RNF43Q68DV7 783 aa19.2■□□□□ 0.66
TSSC4-201ENST00000333256 C1orf228Q6PIY5 440 aa19.2■□□□□ 0.66
TSSC4-201ENST00000333256 NPNTQ6UXI9 565 aa19.2■□□□□ 0.66
TSSC4-201ENST00000333256 VSIG1Q86XK7 387 aa19.2■□□□□ 0.66
TSSC4-201ENST00000333256 ETFBKMTQ8IXQ9 262 aa19.2■□□□□ 0.66
TSSC4-201ENST00000333256 PLD5Q8N7P1 536 aa19.2■□□□□ 0.66
TSSC4-201ENST00000333256 XPO6Q96QU8 1125 aaKnown RBP19.2■□□□□ 0.66
TSSC4-201ENST00000333256 ABCB8Q9NUT2 735 aa19.2■□□□□ 0.66
TSSC4-201ENST00000333256 DUSP12Q9UNI6 340 aa19.2■□□□□ 0.66
TSSC4-201ENST00000333256 PIAS3Q9Y6X2 628 aa19.2■□□□□ 0.66
TSSC4-201ENST00000333256 TICRRQ7Z2Z1 1910 aa19.19■□□□□ 0.66
TSSC4-201ENST00000333256 A0A0D9SEW6 157 aa19.19■□□□□ 0.66
TSSC4-201ENST00000333256 WASH4PA8MWX3 477 aa19.19■□□□□ 0.66
TSSC4-201ENST00000333256 ZNF487B1APH4 448 aa19.19■□□□□ 0.66
TSSC4-201ENST00000333256 APOL1O14791 398 aa19.19■□□□□ 0.66
TSSC4-201ENST00000333256 MFSD11O43934 449 aa19.19■□□□□ 0.66
TSSC4-201ENST00000333256 RHOCP08134 193 aa19.19■□□□□ 0.66
TSSC4-201ENST00000333256 HLA-FP30511 346 aa19.19■□□□□ 0.66
TSSC4-201ENST00000333256 CD70P32970 193 aa19.19■□□□□ 0.66
TSSC4-201ENST00000333256 OPRD1P41143 372 aa19.19■□□□□ 0.66
TSSC4-201ENST00000333256 GBE1Q04446 702 aa19.19■□□□□ 0.66
TSSC4-201ENST00000333256 KDSRQ06136 332 aa19.19■□□□□ 0.66
TSSC4-201ENST00000333256 TJAP1Q5JTD0 557 aa19.19■□□□□ 0.66
TSSC4-201ENST00000333256 SLC9A4Q6AI14 798 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms