RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 SPAG4Q9NPE6 437 aa19.69■□□□□ 0.74
USP48-201ENST00000308271 MORF4L1Q9UBU8 362 aa19.69■□□□□ 0.74
USP48-201ENST00000308271 FAM32AQ9Y421 112 aaKnown RBP19.69■□□□□ 0.74
USP48-201ENST00000308271 DYTNA2CJ06 578 aa19.69■□□□□ 0.74
USP48-201ENST00000308271 SLC26A2P50443 739 aa19.69■□□□□ 0.74
USP48-201ENST00000308271 CSTF3Q12996 717 aaKnown RBP19.69■□□□□ 0.74
USP48-201ENST00000308271 NOMO1Q15155 1222 aa19.69■□□□□ 0.74
USP48-201ENST00000308271 PACS1Q6VY07 963 aa19.69■□□□□ 0.74
USP48-201ENST00000308271 TTC30AQ86WT1 665 aa19.69■□□□□ 0.74
USP48-201ENST00000308271 ACE2Q9BYF1 805 aaPredicted RBP19.69■□□□□ 0.74
USP48-201ENST00000308271 RAD54BQ9Y620 910 aa19.69■□□□□ 0.74
USP48-201ENST00000308271 POU6F1Q14863 301 aa19.69■□□□□ 0.74
USP48-201ENST00000308271 INSCQ1MX18 579 aa19.69■□□□□ 0.74
USP48-201ENST00000308271 CNPY1Q3B7I2 92 aa19.69■□□□□ 0.74
USP48-201ENST00000308271 MIER2Q8N344 545 aa19.69■□□□□ 0.74
USP48-201ENST00000308271 TEX12Q9BXU0 123 aa19.69■□□□□ 0.74
USP48-201ENST00000308271 SLC38A7Q9NVC3 462 aa19.69■□□□□ 0.74
USP48-201ENST00000308271 ASS1P00966 412 aaKnown RBP19.69■□□□□ 0.74
USP48-201ENST00000308271 ZNF484Q5JVG2 852 aa19.69■□□□□ 0.74
USP48-201ENST00000308271 TRIM69Q86WT6 500 aa19.69■□□□□ 0.74
USP48-201ENST00000308271 SPATA2LQ8IUW3 424 aaPredicted RBP19.69■□□□□ 0.74
USP48-201ENST00000308271 CENPLQ8N0S6 344 aaPredicted RBP19.69■□□□□ 0.74
USP48-201ENST00000308271 GPBP1L1Q9HC44 474 aaPredicted RBP19.69■□□□□ 0.74
USP48-201ENST00000308271 SIN3BO75182 1162 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 GRIK1P39086 918 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 CRADDP78560 199 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 ITGADQ13349 1161 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 RDH11Q8TC12 318 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 GIPC3Q8TF64 312 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 SNRNP25Q9BV90 132 aaKnown RBP19.68■□□□□ 0.74
USP48-201ENST00000308271 UNKQ9C0B0 810 aaKnown RBP19.68■□□□□ 0.74
USP48-201ENST00000308271 PKP3Q9Y446 797 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 MYH8P13535 1937 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 VAPBO95292 243 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 SNRPB2P08579 225 aaKnown RBP19.68■□□□□ 0.74
USP48-201ENST00000308271 GRIA4P48058 902 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 CSE1LP55060 971 aaKnown RBP19.68■□□□□ 0.74
USP48-201ENST00000308271 ILF2Q12905 390 aaKnown RBP19.68■□□□□ 0.74
USP48-201ENST00000308271 SQLEQ14534 574 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 LPIN1Q14693 890 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 ABRAXAS1Q6UWZ7 409 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 UNC5AQ6ZN44 842 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 STK32CQ86UX6 486 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 OR5B17Q8NGF7 314 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 RNF217Q8TC41 542 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 SLC25A27O95847 323 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 AKT1P31749 480 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 GRIA3P42263 894 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 MRPL28Q13084 256 aaKnown RBP19.68■□□□□ 0.74
USP48-201ENST00000308271 PIWIL4Q7Z3Z4 852 aaKnown RBP19.68■□□□□ 0.74
USP48-201ENST00000308271 ZFAND2BQ8WV99 257 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 ASB2Q96Q27 587 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 POLR1BQ9H9Y6 1135 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 EME2A4GXA9 379 aaPredicted RBP19.68■□□□□ 0.74
USP48-201ENST00000308271 H3BNX3 289 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 CHRM3P20309 590 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 ACO1P21399 889 aaKnown RBP19.68■□□□□ 0.74
USP48-201ENST00000308271 CACNB2Q08289 660 aaPredicted RBP19.68■□□□□ 0.74
USP48-201ENST00000308271 BFSP2Q13515 415 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 DPYSQ14117 519 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 PSTKQ8IV42 348 aaKnown RBP19.68■□□□□ 0.74
USP48-201ENST00000308271 AGBL3Q8NEM8 1001 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 PTCD3Q96EY7 689 aaKnown RBP19.68■□□□□ 0.74
USP48-201ENST00000308271 RNF145Q96MT1 663 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 IL22Q9GZX6 179 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 POMKQ9H5K3 350 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 AFF4Q9UHB7 1163 aaKnown RBP19.68■□□□□ 0.74
USP48-201ENST00000308271 SQORQ9Y6N5 450 aa19.68■□□□□ 0.74
USP48-201ENST00000308271 EPHA3P29320 983 aa19.67■□□□□ 0.74
USP48-201ENST00000308271 GALNTL6Q49A17 601 aa19.67■□□□□ 0.74
USP48-201ENST00000308271 ZNF618Q5T7W0 954 aa19.67■□□□□ 0.74
USP48-201ENST00000308271 KLHL23Q8NBE8 558 aa19.67■□□□□ 0.74
USP48-201ENST00000308271 RORBQ92753 470 aa19.67■□□□□ 0.74
USP48-201ENST00000308271 GSNP06396 782 aa19.67■□□□□ 0.74
USP48-201ENST00000308271 GALK1P51570 392 aa19.67■□□□□ 0.74
USP48-201ENST00000308271 YWHAZP63104 245 aaKnown RBP19.67■□□□□ 0.74
USP48-201ENST00000308271 DGUOKQ16854 277 aa19.67■□□□□ 0.74
USP48-201ENST00000308271 CACHD1Q5VU97 1274 aa19.67■□□□□ 0.74
USP48-201ENST00000308271 DPY19L2Q6NUT2 758 aa19.67■□□□□ 0.74
USP48-201ENST00000308271 TRAF7Q6Q0C0 670 aa19.67■□□□□ 0.74
USP48-201ENST00000308271 METTL7BQ6UX53 244 aa19.67■□□□□ 0.74
USP48-201ENST00000308271 MRIQ9BWK5 157 aa19.67■□□□□ 0.74
USP48-201ENST00000308271 LATS2Q9NRM7 1088 aa19.67■□□□□ 0.74
USP48-201ENST00000308271 DNAJC28Q9NX36 388 aa19.67■□□□□ 0.74
USP48-201ENST00000308271 TRMT6Q9UJA5 497 aaKnown RBP19.67■□□□□ 0.74
USP48-201ENST00000308271 GNEQ9Y223 722 aaKnown RBP19.67■□□□□ 0.74
USP48-201ENST00000308271 ZNF197O14709 1029 aa19.67■□□□□ 0.74
USP48-201ENST00000308271 USP12O75317 370 aa19.67■□□□□ 0.74
USP48-201ENST00000308271 PEX2P28328 305 aa19.67■□□□□ 0.74
USP48-201ENST00000308271 BACE1P56817 501 aa19.67■□□□□ 0.74
USP48-201ENST00000308271 TGFB2P61812 414 aa19.67■□□□□ 0.74
USP48-201ENST00000308271 BORCS5Q969J3 196 aa19.67■□□□□ 0.74
USP48-201ENST00000308271 TCF12Q99081 682 aa19.67■□□□□ 0.74
USP48-201ENST00000308271 EBF3Q9H4W6 596 aa19.67■□□□□ 0.74
USP48-201ENST00000308271 ANAPC2Q9UJX6 822 aa19.67■□□□□ 0.74
USP48-201ENST00000308271 MYH10P35580 1976 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 SNAP91O60641 907 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 PSMB4P28070 264 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 USP4Q13107 963 aa19.66■□□□□ 0.74
USP48-201ENST00000308271 CCDC85BQ15834 202 aaPredicted RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms