RNA–Protein interactions for RNA: ENST00000264596.3

NEIL3-201, Transcript of nei like DNA glycosylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL3, Length 2,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-201ENST00000264596 FAM72AQ5TYM5 149 aa20.23■□□□□ 0.83
NEIL3-201ENST00000264596 FAM72DQ6L9T8 149 aa20.23■□□□□ 0.83
NEIL3-201ENST00000264596 DPY19L2Q6NUT2 758 aa20.23■□□□□ 0.83
NEIL3-201ENST00000264596 IRGCQ6NXR0 463 aa20.23■□□□□ 0.83
NEIL3-201ENST00000264596 FAM72BQ86X60 149 aa20.23■□□□□ 0.83
NEIL3-201ENST00000264596 SIX6OS1Q8N1H7 587 aa20.23■□□□□ 0.83
NEIL3-201ENST00000264596 RNF169Q8NCN4 708 aa20.23■□□□□ 0.83
NEIL3-201ENST00000264596 NPY6RQ99463 290 aa20.23■□□□□ 0.83
NEIL3-201ENST00000264596 MED10Q9BTT4 135 aa20.23■□□□□ 0.83
NEIL3-201ENST00000264596 SNX15Q9NRS6 342 aa20.23■□□□□ 0.83
NEIL3-201ENST00000264596 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.22■□□□□ 0.83
NEIL3-201ENST00000264596 RRN3P2A6NIE6 340 aa20.22■□□□□ 0.83
NEIL3-201ENST00000264596 SIN3BO75182 1162 aa20.22■□□□□ 0.83
NEIL3-201ENST00000264596 RALBP11234 206 aa20.22■□□□□ 0.83
NEIL3-201ENST00000264596 YY1P25490 414 aa20.22■□□□□ 0.83
NEIL3-201ENST00000264596 CPOXP36551 454 aa20.22■□□□□ 0.83
NEIL3-201ENST00000264596 GARSP41250 739 aaKnown RBP20.22■□□□□ 0.83
NEIL3-201ENST00000264596 IDH3AP50213 366 aa20.22■□□□□ 0.83
NEIL3-201ENST00000264596 SV2CQ496J9 727 aa20.22■□□□□ 0.83
NEIL3-201ENST00000264596 PSTKQ8IV42 348 aaKnown RBP20.22■□□□□ 0.83
NEIL3-201ENST00000264596 TNS4Q8IZW8 715 aa20.22■□□□□ 0.83
NEIL3-201ENST00000264596 DCLK2Q8N568 766 aa20.22■□□□□ 0.83
NEIL3-201ENST00000264596 GSTCDQ8NEC7 633 aa20.22■□□□□ 0.83
NEIL3-201ENST00000264596 DNAJB3Q8WWF6 145 aa20.22■□□□□ 0.83
NEIL3-201ENST00000264596 DLGAP2Q9P1A6 1054 aa20.22■□□□□ 0.83
NEIL3-201ENST00000264596 STAP1Q9ULZ2 295 aa20.22■□□□□ 0.83
NEIL3-201ENST00000264596 PDHXO00330 501 aa20.22■□□□□ 0.83
NEIL3-201ENST00000264596 NPR3P17342 541 aa20.22■□□□□ 0.83
NEIL3-201ENST00000264596 PNPLA4P41247 253 aa20.22■□□□□ 0.83
NEIL3-201ENST00000264596 DPYSQ14117 519 aa20.22■□□□□ 0.83
NEIL3-201ENST00000264596 PAFAH1B3Q15102 231 aaKnown RBP20.22■□□□□ 0.83
NEIL3-201ENST00000264596 SPANXN3Q5MJ09 141 aa20.22■□□□□ 0.83
NEIL3-201ENST00000264596 MYLK4Q86YV6 388 aaPredicted RBP20.22■□□□□ 0.83
NEIL3-201ENST00000264596 SLC7A14Q8TBB6 771 aa20.22■□□□□ 0.83
NEIL3-201ENST00000264596 HNRNPABQ99729 332 aaKnown RBP20.22■□□□□ 0.83
NEIL3-201ENST00000264596 DNAI2Q9GZS0 605 aa20.22■□□□□ 0.83
NEIL3-201ENST00000264596 C1orf21Q9H246 121 aa20.22■□□□□ 0.83
NEIL3-201ENST00000264596 SORCS3Q9UPU3 1222 aa20.22■□□□□ 0.83
NEIL3-201ENST00000264596 A0A088AWK7 358 aa20.21■□□□□ 0.83
NEIL3-201ENST00000264596 USP1O94782 785 aa20.21■□□□□ 0.83
NEIL3-201ENST00000264596 MAP3K7CLP57077 242 aa20.21■□□□□ 0.83
NEIL3-201ENST00000264596 LILRA4P59901 499 aa20.21■□□□□ 0.83
NEIL3-201ENST00000264596 ABCE1P61221 599 aaKnown RBP20.21■□□□□ 0.83
NEIL3-201ENST00000264596 HIC1Q14526 733 aa20.21■□□□□ 0.83
NEIL3-201ENST00000264596 RALGPS1Q5JS13 557 aa20.21■□□□□ 0.83
NEIL3-201ENST00000264596 STRA8Q7Z7C7 330 aa20.21■□□□□ 0.83
NEIL3-201ENST00000264596 PLD6Q8N2A8 252 aaKnown RBP20.21■□□□□ 0.83
NEIL3-201ENST00000264596 DNAAF3Q8N9W5 541 aa20.21■□□□□ 0.83
NEIL3-201ENST00000264596 WNT8BQ93098 351 aa20.21■□□□□ 0.83
NEIL3-201ENST00000264596 AGAP2Q99490 1192 aa20.21■□□□□ 0.83
NEIL3-201ENST00000264596 ZNF184Q99676 751 aaPredicted RBP20.21■□□□□ 0.83
NEIL3-201ENST00000264596 CPNE1Q99829 537 aa20.21■□□□□ 0.83
NEIL3-201ENST00000264596 IGSF9Q9P2J2 1179 aa20.21■□□□□ 0.83
NEIL3-201ENST00000264596 PDCD11Q14690 1871 aaKnown RBP20.21■□□□□ 0.83
NEIL3-201ENST00000264596 DCLK1O15075 740 aa20.21■□□□□ 0.83
NEIL3-201ENST00000264596 DYNC1LI2O43237 492 aaPredicted RBP20.21■□□□□ 0.83
NEIL3-201ENST00000264596 KLHL2O95198 593 aa20.21■□□□□ 0.83
NEIL3-201ENST00000264596 CPA3P15088 417 aa20.21■□□□□ 0.83
NEIL3-201ENST00000264596 ERCC2P18074 760 aa20.21■□□□□ 0.83
NEIL3-201ENST00000264596 MX2P20592 715 aa20.21■□□□□ 0.83
NEIL3-201ENST00000264596 IGFBP6P24592 240 aaPredicted RBP20.21■□□□□ 0.83
NEIL3-201ENST00000264596 GRK2P25098 689 aa20.21■□□□□ 0.83
NEIL3-201ENST00000264596 AP2B1P63010 937 aa20.21■□□□□ 0.83
NEIL3-201ENST00000264596 GRTP1Q5TC63 336 aa20.21■□□□□ 0.83
NEIL3-201ENST00000264596 PAQR9Q6ZVX9 377 aa20.21■□□□□ 0.83
NEIL3-201ENST00000264596 NT5C3BQ969T7 300 aa20.21■□□□□ 0.83
NEIL3-201ENST00000264596 GORASP1Q9BQQ3 440 aa20.21■□□□□ 0.83
NEIL3-201ENST00000264596 OXCT2Q9BYC2 517 aaPredicted RBP20.21■□□□□ 0.83
NEIL3-201ENST00000264596 CAB39LQ9H9S4 337 aa20.21■□□□□ 0.83
NEIL3-201ENST00000264596 ANLNQ9NQW6 1124 aa20.21■□□□□ 0.83
NEIL3-201ENST00000264596 NDE1Q9NXR1 346 aa20.21■□□□□ 0.83
NEIL3-201ENST00000264596 PPM1HQ9ULR3 514 aa20.21■□□□□ 0.83
NEIL3-201ENST00000264596 XPOTO43592 962 aaKnown RBP20.2■□□□□ 0.82
NEIL3-201ENST00000264596 SBF1O95248 1867 aa20.2■□□□□ 0.82
NEIL3-201ENST00000264596 HOXD8P13378 290 aaPredicted RBP20.2■□□□□ 0.82
NEIL3-201ENST00000264596 NCF2P19878 526 aaPredicted RBP20.2■□□□□ 0.82
NEIL3-201ENST00000264596 PTPN3P26045 913 aa20.2■□□□□ 0.82
NEIL3-201ENST00000264596 TKTL1P51854 596 aa20.2■□□□□ 0.82
NEIL3-201ENST00000264596 INSCQ1MX18 579 aa20.2■□□□□ 0.82
NEIL3-201ENST00000264596 PDPK2PQ6A1A2 396 aa20.2■□□□□ 0.82
NEIL3-201ENST00000264596 CLEC20AQ6ZU45 233 aa20.2■□□□□ 0.82
NEIL3-201ENST00000264596 ARRDC4Q8NCT1 418 aa20.2■□□□□ 0.82
NEIL3-201ENST00000264596 MAML3Q96JK9 1138 aa20.2■□□□□ 0.82
NEIL3-201ENST00000264596 STN1Q9H668 368 aaKnown RBP20.2■□□□□ 0.82
NEIL3-201ENST00000264596 CACNG4Q9UBN1 327 aa20.2■□□□□ 0.82
NEIL3-201ENST00000264596 VANGL2Q9ULK5 521 aa20.2■□□□□ 0.82
NEIL3-201ENST00000264596 NRCAMQ92823 1304 aa20.2■□□□□ 0.82
NEIL3-201ENST00000264596 NRP1O14786 923 aa20.19■□□□□ 0.82
NEIL3-201ENST00000264596 AMHP03971 560 aa20.19■□□□□ 0.82
NEIL3-201ENST00000264596 PTPN1P18031 435 aaKnown RBP20.19■□□□□ 0.82
NEIL3-201ENST00000264596 COPAP53621 1224 aa20.19■□□□□ 0.82
NEIL3-201ENST00000264596 EPHB1P54762 984 aa20.19■□□□□ 0.82
NEIL3-201ENST00000264596 WSCD1Q658N2 575 aa20.19■□□□□ 0.82
NEIL3-201ENST00000264596 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.19■□□□□ 0.82
NEIL3-201ENST00000264596 SLC10A4Q96EP9 437 aa20.19■□□□□ 0.82
NEIL3-201ENST00000264596 RBBP8Q99708 897 aa20.19■□□□□ 0.82
NEIL3-201ENST00000264596 APOL2Q9BQE5 337 aa20.19■□□□□ 0.82
NEIL3-201ENST00000264596 LRRC40Q9H9A6 602 aa20.19■□□□□ 0.82
NEIL3-201ENST00000264596 DNAJC28Q9NX36 388 aa20.19■□□□□ 0.82
NEIL3-201ENST00000264596 SF3B1O75533 1304 aaKnown RBP eCLIP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms