RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 DCLK2Q8N568 766 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 B3GALNT2Q8NCR0 500 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 OR52K1Q8NGK4 314 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 OR6Y1Q8NGX8 325 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 CDCA5Q96FF9 252 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 PGLYRP2Q96PD5 576 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 HNRNPABQ99729 332 aaKnown RBP15.61■□□□□ 0.09
DDX56-201ENST00000258772 DNAI2Q9GZS0 605 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 SNX15Q9NRS6 342 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 E2F8A0AVK6 867 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 RRN3P2A6NIE6 340 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 KCNK1O00180 336 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 EEF2KO00418 725 aaKnown RBP15.61■□□□□ 0.09
DDX56-201ENST00000258772 DCLK1O15075 740 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 BEST1O76090 585 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 PNPLA4P41247 253 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 MAGEA12P43365 314 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 NDUFV1P49821 464 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 CDC42EP1Q00587 391 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 NME3Q13232 169 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 DGKDQ16760 1214 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 VWA5B1Q5TIE3 1220 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 AAGABQ6PD74 315 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 ISL2Q96A47 359 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 RBBP8Q99708 897 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 LRRC40Q9H9A6 602 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 GOLGA2P5Q9HBQ8 144 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 ASB3Q9Y575 518 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 NUP205Q92621 2012 aa15.61■□□□□ 0.09
DDX56-201ENST00000258772 PLXNB2O15031 1838 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 CLDN5O00501 218 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 CCNT2O60583 730 aaKnown RBP15.6■□□□□ 0.09
DDX56-201ENST00000258772 HUS1O60921 280 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 DARSP14868 501 aaKnown RBP15.6■□□□□ 0.09
DDX56-201ENST00000258772 CRABP2P29373 138 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 SPRP35270 261 aaPredicted RBP15.6■□□□□ 0.09
DDX56-201ENST00000258772 CDK7P50613 346 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 GTF2A2P52657 109 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 CCNA1P78396 465 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 DSG1Q02413 1049 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 SOX4Q06945 474 aaPredicted RBP15.6■□□□□ 0.09
DDX56-201ENST00000258772 GSTA3Q16772 222 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 DUSP28Q4G0W2 176 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 PDPK2PQ6A1A2 396 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 IZUMO2Q6UXV1 221 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 ADGRG6Q86SQ4 1221 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 OSTM1Q86WC4 334 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 TNS4Q8IZW8 715 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 PLD6Q8N2A8 252 aaKnown RBP15.6■□□□□ 0.09
DDX56-201ENST00000258772 AGAP3Q96P47 875 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 RNF39Q9H2S5 420 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 PIGVQ9NUD9 493 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 KLHL8Q9P2G9 620 aaPredicted RBP15.6■□□□□ 0.09
DDX56-201ENST00000258772 ADAM28Q9UKQ2 775 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 STAP1Q9ULZ2 295 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 ENO4A6NNW6 628 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 MAP3K13O43283 966 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 USP12O75317 370 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 USP1O94782 785 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 PTPN3P26045 913 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 GJA5P36382 358 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 CACNA2D1P54289 1103 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 IRX1P78414 480 aaPredicted RBP15.6■□□□□ 0.09
DDX56-201ENST00000258772 DEUP1Q05D60 604 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 PCBP1Q15365 356 aaKnown RBP eCLIP15.6■□□□□ 0.09
DDX56-201ENST00000258772 NAIF1Q69YI7 327 aaPredicted RBP15.6■□□□□ 0.09
DDX56-201ENST00000258772 PGM2L1Q6PCE3 622 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 STRA8Q7Z7C7 330 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 TMEM135Q86UB9 458 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 OR6J1Q8NGC5 347 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 WNT8BQ93098 351 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 ZNF669Q96BR6 464 aaPredicted RBP15.6■□□□□ 0.09
DDX56-201ENST00000258772 CMTM5Q96DZ9 223 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 NR1H4Q96RI1 486 aaPredicted RBP15.6■□□□□ 0.09
DDX56-201ENST00000258772 ECSITQ9BQ95 431 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 GORASP1Q9BQQ3 440 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 PPP1R12CQ9BZL4 782 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 S100A14Q9HCY8 104 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 BFARQ9NZS9 450 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 PCDHB12Q9Y5F1 795 aa15.6■□□□□ 0.09
DDX56-201ENST00000258772 SBF1O95248 1867 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 TSC2P49815 1807 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 FAM72CH0Y354 149 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 XPOTO43592 962 aaKnown RBP15.59■□□□□ 0.09
DDX56-201ENST00000258772 CAPN15O75808 1086 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 AP2A1O95782 977 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 NPR3P17342 541 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 NCF2P19878 526 aaPredicted RBP15.59■□□□□ 0.09
DDX56-201ENST00000258772 LIMK2P53671 638 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 LILRA4P59901 499 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 SV2CQ496J9 727 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 FAM72AQ5TYM5 149 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 RNF220Q5VTB9 566 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 FAM72DQ6L9T8 149 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 FSTL4Q6MZW2 842 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 HFE2Q6ZVN8 426 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 PAQR9Q6ZVX9 377 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 FAM72BQ86X60 149 aa15.59■□□□□ 0.09
DDX56-201ENST00000258772 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.59■□□□□ 0.09
DDX56-201ENST00000258772 PPP1R13LQ8WUF5 828 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms