RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 EGFLAMQ63HQ2 1017 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 MZT2AQ6P582 158 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 HPDLQ96IR7 371 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 ZNF333Q96JL9 665 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 SH3BP4Q9P0V3 963 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 RIMKLBQ9ULI2 386 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 GSTK1Q9Y2Q3 226 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 UNC13AQ9UPW8 1703 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 CPDO75976 1380 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 EDC4Q6P2E9 1401 aaKnown RBP11.31□□□□□ -0.6
MSH6-201ENST00000234420 ATP10AO60312 1499 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 C2orf81A6NN90 581 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 EPN2O95208 641 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 PAICSP22234 425 aaKnown RBP11.31□□□□□ -0.6
MSH6-201ENST00000234420 HOXC12P31275 282 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 GLRBP48167 497 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 PRKAG1P54619 331 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 LY6KQ17RY6 165 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 TRAPPC5Q8IUR0 188 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 GPRASP2Q96D09 838 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 MCCC2Q9HCC0 563 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 ZNF70Q9UC06 446 aaPredicted RBP11.31□□□□□ -0.6
MSH6-201ENST00000234420 RSL24D1Q9UHA3 163 aaKnown RBP11.31□□□□□ -0.6
MSH6-201ENST00000234420 M0QYT0 321 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 CCL16O15467 120 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 APOL3O95236 402 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 IL1R1P14778 569 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 CCNHP51946 323 aaPredicted RBP11.31□□□□□ -0.6
MSH6-201ENST00000234420 ARHGDIBP52566 201 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 ELF3P78545 371 aaPredicted RBP11.31□□□□□ -0.6
MSH6-201ENST00000234420 RBP5P82980 135 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 PTSQ03393 145 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 COASYQ13057 564 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 FAM171BQ6P995 826 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 KCNV1Q6PIU1 500 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 ZNF605Q86T29 641 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 FMR1NBQ8N0W7 255 aaPredicted RBP11.31□□□□□ -0.6
MSH6-201ENST00000234420 AMER2Q8N7J2 671 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 AGAP11Q8TF27 550 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 GAL3ST3Q96A11 431 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 VPS33AQ96AX1 596 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 CRNNQ9UBG3 495 aaPredicted RBP11.31□□□□□ -0.6
MSH6-201ENST00000234420 FAM220BPB1ANY3 271 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 VPS4BO75351 444 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 MT-CO1P00395 513 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 PCP11498 1178 aaKnown RBP11.31□□□□□ -0.6
MSH6-201ENST00000234420 MSR1P21757 451 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 BGNP21810 368 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 HALP42357 657 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 RPS6KA3P51812 740 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 ALCAMQ13740 583 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 DEFB115Q30KQ5 88 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 ITIH5Q86UX2 942 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 POU5F2Q8N7G0 328 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 KYQ8NBH2 561 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 TBCDQ9BTW9 1192 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 PRRG3Q9BZD7 231 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 SP140LQ9H930 580 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 XPNPEP3Q9NQH7 507 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 ADARB2Q9NS39 739 aaKnown RBP11.31□□□□□ -0.6
MSH6-201ENST00000234420 CHORDC1Q9UHD1 332 aaPredicted RBP11.31□□□□□ -0.6
MSH6-201ENST00000234420 TRAPPC8Q9Y2L5 1435 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 NFIXQ14938 502 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 ZCCHC8Q6NZY4 707 aaKnown RBP11.31□□□□□ -0.6
MSH6-201ENST00000234420 SPPL2AQ8TCT8 520 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 TTYH1Q9H313 450 aaPredicted RBP11.31□□□□□ -0.6
MSH6-201ENST00000234420 GOLPH3Q9H4A6 298 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 PRKAG3Q9UGI9 489 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 MGAT4DA6NG13 374 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 NOTOA8MTQ0 251 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 LDLRP01130 860 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 FGRP09769 529 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 PRKAR1AP10644 381 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 SLC5A9Q2M3M2 681 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 FAM9CQ8IZT9 166 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 TNS4Q8IZW8 715 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 HNRNPLLQ8WVV9 542 aaKnown RBP11.31□□□□□ -0.6
MSH6-201ENST00000234420 DEFB118Q96PH6 123 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 CIDEBQ9UHD4 219 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 L1RE1Q9UN81 338 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 PCDHA10Q9Y5I2 948 aa11.31□□□□□ -0.6
MSH6-201ENST00000234420 INSRP06213 1382 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 SLC25A12O75746 678 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 KDM4BO94953 1096 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 P4HBP07237 508 aaKnown RBP11.3□□□□□ -0.6
MSH6-201ENST00000234420 ATF6P18850 670 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 NMT1P30419 496 aaKnown RBP11.3□□□□□ -0.6
MSH6-201ENST00000234420 HNF4AP41235 474 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 TMPRSS6Q8IU80 811 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 SRBD1Q8N5C6 995 aaKnown RBP11.3□□□□□ -0.6
MSH6-201ENST00000234420 SETD6Q8TBK2 473 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 ELMO3Q96BJ8 720 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 METTL21EPA6NDL7 271 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 CCNA2P20248 432 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 MSX1P28360 303 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 KCNJ5P48544 419 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 GALCP54803 685 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 PRKCEQ02156 737 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 NCOA4Q13772 614 aa11.3□□□□□ -0.6
MSH6-201ENST00000234420 CCINQ13939 588 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 210.6 ms