RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 RETSATQ6NUM9 610 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 LRRC6Q86X45 466 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 CDCA5Q96FF9 252 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 FERD3LQ96RJ6 166 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 ADPRHL2Q9NX46 363 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 A0A088AWK7 358 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 MAGEA13PA6NCF6 341 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 CCDC85CA6NKD9 419 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 TRDMT1O14717 391 aaKnown RBP11.31□□□□□ -0.6
KNOP1-201ENST00000219837 HIST1H2ABP04908 130 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 ZNF10P21506 573 aaPredicted RBP11.31□□□□□ -0.6
KNOP1-201ENST00000219837 NTSP30990 170 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 MMP13P45452 471 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 HIST3H2AQ7L7L0 130 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 HIST1H2ACQ93077 130 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 S100A13Q99584 98 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 OLFM1Q99784 485 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 HGH1Q9BTY7 390 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 CDC42EP4Q9H3Q1 356 aaKnown RBP11.31□□□□□ -0.6
KNOP1-201ENST00000219837 NCKIPSDQ9NZQ3 722 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 COQ6Q9Y2Z9 468 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 KANSL1LA0AUZ9 987 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 KLHL18O94889 574 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 NPY2RP49146 381 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 MGAT5Q09328 741 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 PRAMEF19Q5SWL8 479 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 SLC26A11Q86WA9 606 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 SLC41A1Q8IVJ1 513 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 REXO1L1PQ8IX06 675 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 UROC1Q96N76 676 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 TMEM79Q9BSE2 394 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 DLGAP2Q9P1A6 1054 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 VTI1BQ9UEU0 232 aa11.31□□□□□ -0.6
KNOP1-201ENST00000219837 SMIM31A0A1B0GVY4 71 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 CCDC189A1A4V9 331 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 ATP5BP06576 529 aaKnown RBP11.3□□□□□ -0.6
KNOP1-201ENST00000219837 NQO1P15559 274 aaKnown RBP11.3□□□□□ -0.6
KNOP1-201ENST00000219837 FASTKQ14296 549 aaKnown RBP11.3□□□□□ -0.6
KNOP1-201ENST00000219837 CYP2A13Q16696 494 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 ZNF618Q5T7W0 954 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 PRMT9Q6P2P2 845 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 KDM7AQ6ZMT4 941 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 ZNF571Q7Z3V5 609 aaPredicted RBP11.3□□□□□ -0.6
KNOP1-201ENST00000219837 SYT12Q8IV01 421 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 HTR3CQ8WXA8 447 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 ADAM2Q99965 735 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 DCLK3Q9C098 648 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 RIBC2Q9H4K1 309 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 TMEM150BA6NC51 233 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 ANKDD1BA6NHY2 528 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 COX7A2P14406 83 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 C4BPBP20851 252 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 RFX5P48382 616 aaPredicted RBP11.3□□□□□ -0.6
KNOP1-201ENST00000219837 NR2C2P49116 596 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 CLK3P49761 638 aaKnown RBP11.3□□□□□ -0.6
KNOP1-201ENST00000219837 TRIM16LQ309B1 348 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 RAET1GQ6H3X3 334 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 ADGRA1Q86SQ6 560 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 DENND1CQ8IV53 801 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 ABRAQ8N0Z2 381 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.3□□□□□ -0.6
KNOP1-201ENST00000219837 OXCT2Q9BYC2 517 aaPredicted RBP11.3□□□□□ -0.6
KNOP1-201ENST00000219837 POLR1BQ9H9Y6 1135 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 TMPRSS4Q9NRS4 437 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 ABCC13Q9NSE7 274 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 GALNT8Q9NY28 637 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.3□□□□□ -0.6
KNOP1-201ENST00000219837 SATB2Q9UPW6 733 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 CRYL1Q9Y2S2 319 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 DUSP10Q9Y6W6 482 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 MROH7Q68CQ1 1323 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 CALB2P22676 271 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 RXRGP48443 463 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 POLR2LP62875 67 aaKnown RBP11.3□□□□□ -0.6
KNOP1-201ENST00000219837 IL27RAQ6UWB1 636 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 MCOLN2Q8IZK6 566 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 ELMO1Q92556 727 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 RNFT2Q96EX2 444 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 BPIFA1Q9NP55 256 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 MKL2Q9ULH7 1088 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 USP20Q9Y2K6 914 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 AP4S1Q9Y587 144 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 TAF6LQ9Y6J9 622 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 MAPTP10636 758 aaKnown RBP11.3□□□□□ -0.6
KNOP1-201ENST00000219837 FCGR1AP12314 374 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 GSTM5P46439 218 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 THOP1P52888 689 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 TCHHL1Q5QJ38 904 aaPredicted RBP11.3□□□□□ -0.6
KNOP1-201ENST00000219837 SPATA20Q8TB22 786 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 FAM45AQ8TCE6 357 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 P2RX7Q99572 595 aaKnown RBP11.3□□□□□ -0.6
KNOP1-201ENST00000219837 GNPTGQ9UJJ9 305 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 PIPSLA2A3N6 862 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 H3BN98 237 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 ADCY6O43306 1168 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 FAM228BP0C875 321 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 PSMB9P28065 219 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 CDH8P55286 799 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 ALG11Q2TAA5 492 aa11.3□□□□□ -0.6
KNOP1-201ENST00000219837 NOA1Q8NC60 698 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms