RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 WDR4P57081 412 aaKnown RBP17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 TBX4P57082 545 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 COG7P83436 770 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 TAF10Q12962 218 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 DUSP4Q13115 394 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 TEX44Q53QW1 395 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 C1orf53Q5VUE5 145 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 TAX1BP1Q86VP1 789 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 GSDMBQ8TAX9 411 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 C2orf15Q8WU43 125 aaKnown RBP17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 SGSM3Q96HU1 749 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 C1orf74Q96LT6 269 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 CWH43Q9H720 699 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 CATSPERBQ9H7T0 1116 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 SSU72Q9NP77 194 aaKnown RBP17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 CLIC5Q9NZA1 410 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 TRHDEQ9UKU6 1024 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 CDY1Q9Y6F8 540 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 IKBKGQ9Y6K9 419 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 DOCK4Q8N1I0 1966 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 NYNRINQ9P2P1 1898 aaKnown RBP17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 WDR27A2RRH5 827 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 SDR42E2A6NKP2 422 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 E9PAM4 449 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 TYROBPO43914 113 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 INHBAP08476 426 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 SLC2A3P11169 496 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 KRT4P19013 534 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 TUBP50607 506 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 MLLT6P55198 1093 aaPredicted RBP17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 ZNF33AQ06730 810 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 EFEMP1Q12805 493 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 IKBKEQ14164 716 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 SPARCL1Q14515 664 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 RASIP1Q5U651 963 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 PIK3R6Q5UE93 754 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 STEAP4Q687X5 459 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 DIS3LQ8TF46 1054 aaKnown RBP17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 STAMBPL1Q96FJ0 436 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 AGAP3Q96P47 875 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 VAT1Q99536 393 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 GBA3Q9H227 469 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 SMYD2Q9NRG4 433 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 COMMD8Q9NX08 183 aa17.67■□□□□ 0.42
RABGGTA-201ENST00000216840 IQANK1A0A1B0GTG1 560 aa17.66■□□□□ 0.42
RABGGTA-201ENST00000216840 DFFAO00273 331 aa17.66■□□□□ 0.42
RABGGTA-201ENST00000216840 ADAM12O43184 909 aa17.66■□□□□ 0.42
RABGGTA-201ENST00000216840 VIMP08670 466 aaKnown RBP17.66■□□□□ 0.42
RABGGTA-201ENST00000216840 MGAT1P26572 445 aa17.66■□□□□ 0.42
RABGGTA-201ENST00000216840 ALDH7A1P49419 539 aaKnown RBP17.66■□□□□ 0.42
RABGGTA-201ENST00000216840 PSEN1P49768 467 aa17.66■□□□□ 0.42
RABGGTA-201ENST00000216840 SESN2P58004 480 aaPredicted RBP17.66■□□□□ 0.42
RABGGTA-201ENST00000216840 CNKSR3Q6P9H4 555 aa17.66■□□□□ 0.42
RABGGTA-201ENST00000216840 TRMT10BQ6PF06 316 aaKnown RBP17.66■□□□□ 0.42
RABGGTA-201ENST00000216840 ARHGAP36Q6ZRI8 547 aa17.66■□□□□ 0.42
RABGGTA-201ENST00000216840 SLC26A11Q86WA9 606 aa17.66■□□□□ 0.42
RABGGTA-201ENST00000216840 LRRC6Q86X45 466 aa17.66■□□□□ 0.42
RABGGTA-201ENST00000216840 LZTR1Q8N653 840 aa17.66■□□□□ 0.42
RABGGTA-201ENST00000216840 PPM1NQ8N819 430 aa17.66■□□□□ 0.42
RABGGTA-201ENST00000216840 FBXO22Q8NEZ5 403 aa17.66■□□□□ 0.42
RABGGTA-201ENST00000216840 SEC16BQ96JE7 1060 aa17.66■□□□□ 0.42
RABGGTA-201ENST00000216840 TSGA13Q96PP4 275 aa17.66■□□□□ 0.42
RABGGTA-201ENST00000216840 VN1R3Q9BXE9 311 aa17.66■□□□□ 0.42
RABGGTA-201ENST00000216840 TLR8Q9NR97 1041 aaKnown RBP17.66■□□□□ 0.42
RABGGTA-201ENST00000216840 PIH1D1Q9NWS0 290 aaKnown RBP17.66■□□□□ 0.42
RABGGTA-201ENST00000216840 FAM159BA6NKW6 160 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 SUN1O94901 812 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 ASMTLO95671 621 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 AP2A1O95782 977 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 TBX18O95935 607 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 JCHAINP01591 159 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 RPA3P35244 121 aaPredicted RBP17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 RPL10AP62906 217 aaKnown RBP17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 CRADDP78560 199 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 ITPRIPL1Q6GPH6 555 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 SPATS2Q86XZ4 545 aaKnown RBP17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 CTAGE3PQ8IX95 158 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 ARNTL2Q8WYA1 636 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 TEKT5Q96M29 485 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 SLC39A8Q9C0K1 460 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 ZMYND15Q9H091 742 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 NDFIP2Q9NV92 336 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 MTRRQ9UBK8 725 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 GGA2Q9UJY4 613 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 ATP11BQ9Y2G3 1177 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 LTBP2Q14767 1821 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 TCP11X1B4DZS4 312 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 FAM155BO75949 473 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 NFKB1P19838 968 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 CA4P22748 312 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 CCNCP24863 283 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 OLIG2Q13516 323 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 TRIP4Q15650 581 aaPredicted RBP17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 USP41Q3LFD5 358 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 GKAP1Q5VSY0 366 aaPredicted RBP17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 AFMIDQ63HM1 303 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 KCTD11Q693B1 232 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 SLC8B1Q6J4K2 584 aa17.65■□□□□ 0.42
RABGGTA-201ENST00000216840 RNF168Q8IYW5 571 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms