RNA–Protein interactions for RNA: ENST00000570021.1

SIN3A-213, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 3

Gene SIN3A, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-213ENST00000570021 MCRS1Q96EZ8 462 aa5.4□□□□□ -1.54
SIN3A-213ENST00000570021 LRIG1Q96JA1 1093 aa5.4□□□□□ -1.54
SIN3A-213ENST00000570021 HNRNPABQ99729 332 aaKnown RBP5.4□□□□□ -1.54
SIN3A-213ENST00000570021 CPPED1Q9BRF8 314 aaPredicted RBP5.4□□□□□ -1.54
SIN3A-213ENST00000570021 HERC2P3Q9BVR0 1158 aa5.4□□□□□ -1.54
SIN3A-213ENST00000570021 MRPL9Q9BYD2 267 aaKnown RBP5.4□□□□□ -1.54
SIN3A-213ENST00000570021 TRIM55Q9BYV6 548 aa5.4□□□□□ -1.54
SIN3A-213ENST00000570021 HAPLN2Q9GZV7 340 aa5.4□□□□□ -1.54
SIN3A-213ENST00000570021 AZI2Q9H6S1 392 aa5.4□□□□□ -1.54
SIN3A-213ENST00000570021 SYBUQ9NX95 663 aa5.4□□□□□ -1.54
SIN3A-213ENST00000570021 MIOSQ9NXC5 875 aa5.4□□□□□ -1.54
SIN3A-213ENST00000570021 PFDN2Q9UHV9 154 aa5.4□□□□□ -1.54
SIN3A-213ENST00000570021 DDX19BQ9UMR2 479 aa5.4□□□□□ -1.54
SIN3A-213ENST00000570021 MSRB2Q9Y3D2 182 aa5.4□□□□□ -1.54
SIN3A-213ENST00000570021 MRPS23Q9Y3D9 190 aaKnown RBP5.4□□□□□ -1.54
SIN3A-213ENST00000570021 DDX39AO00148 427 aaKnown RBP5.39□□□□□ -1.55
SIN3A-213ENST00000570021 CDX4O14627 284 aaPredicted RBP5.39□□□□□ -1.55
SIN3A-213ENST00000570021 CCL16O15467 120 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 PDPK1O15530 556 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 ADAM12O43184 909 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 POMCP01189 267 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 HNRNPLP14866 589 aaKnown RBP eCLIP5.39□□□□□ -1.55
SIN3A-213ENST00000570021 DARSP14868 501 aaKnown RBP5.39□□□□□ -1.55
SIN3A-213ENST00000570021 FCARP24071 287 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 GPC3P51654 580 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 DSG1Q02413 1049 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 RNASELQ05823 741 aaKnown RBP5.39□□□□□ -1.55
SIN3A-213ENST00000570021 DRP2Q13474 957 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 MTMR1Q13613 665 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 UBE2SQ16763 222 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 FAM214AQ32MH5 1076 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 MTERF2Q49AM1 385 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 ZNF484Q5JVG2 852 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 KRTAP5-11Q6L8G4 156 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 SWSAP1Q6NVH7 229 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 EFCAB12Q6NXP0 572 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 FAM43BQ6ZT52 329 aaPredicted RBP5.39□□□□□ -1.55
SIN3A-213ENST00000570021 MTSS1LQ765P7 747 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 CYB5R4Q7L1T6 521 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 WDR5BQ86VZ2 330 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 HDAC7Q8WUI4 952 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 FAM3CQ92520 227 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 ESR2Q92731 530 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 MAGEB10Q96LZ2 347 aaPredicted RBP5.39□□□□□ -1.55
SIN3A-213ENST00000570021 COQ10AQ96MF6 247 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 MBOAT7Q96N66 472 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 ANP32EQ9BTT0 268 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 BOCQ9BWV1 1114 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 PLEKHA4Q9H4M7 779 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 UPF2Q9HAU5 1272 aaKnown RBP5.39□□□□□ -1.55
SIN3A-213ENST00000570021 ZDHHC7Q9NXF8 308 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 DNMT3BQ9UBC3 853 aaKnown RBP5.39□□□□□ -1.55
SIN3A-213ENST00000570021 NDOR1Q9UHB4 597 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 PRG3Q9Y2Y8 225 aaPredicted RBP5.39□□□□□ -1.55
SIN3A-213ENST00000570021 NEUROG3Q9Y4Z2 214 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 ZFP37Q9Y6Q3 630 aaPredicted RBP5.39□□□□□ -1.55
SIN3A-213ENST00000570021 FREM2Q5SZK8 3169 aa5.39□□□□□ -1.55
SIN3A-213ENST00000570021 SPAARA0A1B0GVQ0 90 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 UBA6A0AVT1 1052 aaPredicted RBP5.38□□□□□ -1.55
SIN3A-213ENST00000570021 FAM221BA6H8Z2 402 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 ZNF185O15231 689 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 HOXA3O43365 443 aaPredicted RBP5.38□□□□□ -1.55
SIN3A-213ENST00000570021 EXTL3O43909 919 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 EIF5BO60841 1220 aaKnown RBP5.38□□□□□ -1.55
SIN3A-213ENST00000570021 ECI2O75521 394 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 PAPSS2O95340 614 aaPredicted RBP5.38□□□□□ -1.55
SIN3A-213ENST00000570021 NPTXRO95502 500 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 URODP06132 367 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 CEACAM1P13688 526 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 PLA2G2AP14555 144 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 CCNE1P24864 410 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 MPLP40238 635 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 GLUD2P49448 558 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 FAM193AP78312 1265 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 SCAPQ12770 1279 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 GRM4Q14833 912 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 SLC5A9Q2M3M2 681 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 TTC38Q5R3I4 469 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 C20orf194Q5TEA3 1177 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 PRSS55Q6UWB4 352 aaPredicted RBP5.38□□□□□ -1.55
SIN3A-213ENST00000570021 COLGALT2Q8IYK4 626 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 SPEM1Q8N4L4 309 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 CHCHD4Q8N4Q1 142 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 GLB1L3Q8NCI6 653 aaPredicted RBP5.38□□□□□ -1.55
SIN3A-213ENST00000570021 GSTCDQ8NEC7 633 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 CAVIN3Q969G5 261 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 CDHR1Q96JP9 859 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 PGBD1Q96JS3 809 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 MXRA8Q9BRK3 442 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 EDEM2Q9BV94 578 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 AGO4Q9HCK5 861 aaKnown RBP5.38□□□□□ -1.55
SIN3A-213ENST00000570021 ZNF334Q9HCZ1 680 aaPredicted RBP5.38□□□□□ -1.55
SIN3A-213ENST00000570021 CHST12Q9NRB3 414 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 HELLSQ9NRZ9 838 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 CACNG4Q9UBN1 327 aa5.38□□□□□ -1.55
SIN3A-213ENST00000570021 MRPS17Q9Y2R5 130 aaKnown RBP5.38□□□□□ -1.55
SIN3A-213ENST00000570021 EPN1Q9Y6I3 576 aaPredicted RBP5.38□□□□□ -1.55
SIN3A-213ENST00000570021 MTCL1Q9Y4B5 1905 aaKnown RBP5.38□□□□□ -1.55
SIN3A-213ENST00000570021 COL4A2P08572 1712 aa5.37□□□□□ -1.55
SIN3A-213ENST00000570021 LNP1A1A4G5 178 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms