RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 CIR1Q86X95 450 aaPredicted RBP12.33□□□□□ -0.44
RABGGTA-218ENST00000560777 CCAR2Q8N163 923 aaKnown RBP12.33□□□□□ -0.44
RABGGTA-218ENST00000560777 CARNMT1Q8N4J0 409 aa12.33□□□□□ -0.44
RABGGTA-218ENST00000560777 SPEM1Q8N4L4 309 aa12.33□□□□□ -0.44
RABGGTA-218ENST00000560777 SLC35G2Q8TBE7 412 aa12.33□□□□□ -0.44
RABGGTA-218ENST00000560777 ZNF564Q8TBZ8 553 aaPredicted RBP12.33□□□□□ -0.44
RABGGTA-218ENST00000560777 USP33Q8TEY7 942 aa12.33□□□□□ -0.44
RABGGTA-218ENST00000560777 EIF3CQ99613 913 aaKnown RBP12.33□□□□□ -0.44
RABGGTA-218ENST00000560777 OSGEPQ9NPF4 335 aa12.33□□□□□ -0.44
RABGGTA-218ENST00000560777 ABCB8Q9NUT2 735 aa12.33□□□□□ -0.44
RABGGTA-218ENST00000560777 SPATA6Q9NWH7 488 aaPredicted RBP12.33□□□□□ -0.44
RABGGTA-218ENST00000560777 C2orf42Q9NWW7 574 aa12.33□□□□□ -0.44
RABGGTA-218ENST00000560777 CTTNBP2NLQ9P2B4 639 aa12.33□□□□□ -0.44
RABGGTA-218ENST00000560777 UVRAGQ9P2Y5 699 aa12.33□□□□□ -0.44
RABGGTA-218ENST00000560777 OR12D3Q9UGF7 316 aa12.33□□□□□ -0.44
RABGGTA-218ENST00000560777 PCSK1NQ9UHG2 260 aa12.33□□□□□ -0.44
RABGGTA-218ENST00000560777 IP6K2Q9UHH9 426 aa12.33□□□□□ -0.44
RABGGTA-218ENST00000560777 ANAPC7Q9UJX3 599 aa12.33□□□□□ -0.44
RABGGTA-218ENST00000560777 INTUQ9ULD6 942 aa12.33□□□□□ -0.44
RABGGTA-218ENST00000560777 PCDHA13Q9Y5I0 950 aa12.33□□□□□ -0.44
RABGGTA-218ENST00000560777 ZNF318Q5VUA4 2279 aa12.33□□□□□ -0.44
RABGGTA-218ENST00000560777 KIAA1549LQ6ZVL6 1849 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 KMT2EQ8IZD2 1858 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 CACNA1IQ9P0X4 2223 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 CHURC1-FNTBB4DL54 471 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 E9PAM4 449 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 H0Y626 953 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 LRCH4O75427 683 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 CNTN5O94779 1100 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 DESP17661 470 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 CD70P32970 193 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 PCK1P35558 622 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 TIE1P35590 1138 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 AIF1P55008 147 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 MRPS21P82921 87 aaKnown RBP12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 NRG1Q02297 640 aaPredicted RBP12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 LMAN2Q12907 356 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 ALFQ53S48 1182 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 MANEALQ5VSG8 457 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 TTC39BQ5VTQ0 682 aaPredicted RBP12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 LRRC31Q6UY01 552 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 CYP4V2Q6ZWL3 525 aaPredicted RBP12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 ADIPOR2Q86V24 386 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 C1orf210Q8IVY1 113 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 MFN1Q8IWA4 741 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 MAML2Q8IZL2 1156 aaPredicted RBP12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 PYROXD2Q8N2H3 581 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 NIPA2Q8N8Q9 360 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 RPLP0P6Q8NHW5 317 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 CCDC26Q8TAB7 109 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 KCNV2Q8TDN2 545 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 PEBP4Q96S96 227 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 IER2Q9BTL4 223 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 ZDHHC4Q9NPG8 344 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 POLR3BQ9NW08 1133 aaPredicted RBP12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 MPP6Q9NZW5 540 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 GGA2Q9UJY4 613 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 TFR2Q9UP52 801 aa12.32□□□□□ -0.44
RABGGTA-218ENST00000560777 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 A0A1B0GVM2 712 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 TCAF2A6NFQ2 919 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 GOLGA6L6A8MZA4 724 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 GALR2O43603 387 aaPredicted RBP12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 TIMM44O43615 452 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 ATG13O75143 517 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 CLDN11O75508 207 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 LRIG2O94898 1065 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 PABPC1P11940 636 aaKnown RBP12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 TCF4P15884 667 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 IL1R2P27930 398 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 L1CAMP32004 1257 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 CXCL12P48061 93 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 MRE11P49959 708 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 CDH4P55283 916 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 GSDMDP57764 484 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 ZNF177Q13360 481 aaPredicted RBP12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 CDH18Q13634 790 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 TCEAL1Q15170 157 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 SPA17Q15506 151 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 EFHC2Q5JST6 749 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 ERMARDQ5T6L9 678 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 CXorf57Q6NSI4 855 aaKnown RBP12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 CHST9Q7L1S5 443 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 ANKS1BQ7Z6G8 1248 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 CCDC117Q8IWD4 279 aaPredicted RBP12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 ZNF557Q8N988 423 aaPredicted RBP12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 IL17RCQ8NAC3 791 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 OR52K2Q8NGK3 314 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 NCAPGQ9BPX3 1015 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 ELOVL2Q9NXB9 296 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 KIAA1522Q9P206 1035 aaPredicted RBP12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 PPARGC1AQ9UBK2 798 aaKnown RBP12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 ZNF212Q9UDV6 495 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 INTS6Q9UL03 887 aaKnown RBP12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 USP18Q9UMW8 372 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 TBC1D30Q9Y2I9 924 aa12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 REXO2Q9Y3B8 237 aaKnown RBP12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 MYO18AQ92614 2054 aaKnown RBP12.31□□□□□ -0.44
RABGGTA-218ENST00000560777 WDFY4Q6ZS81 3184 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms