RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 PI4KAP42356 2102 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 JAM2P57087 298 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 ST8SIA6P61647 398 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 PITX1P78337 314 aaPredicted RBP13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 CDR2Q01850 454 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 CAMK2GQ13555 558 aaPredicted RBP13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 NCAPHQ15003 741 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 SYCP1Q15431 976 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 CCDC6Q16204 474 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 PTPRNQ16849 979 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 BRMS1LQ5PSV4 323 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 RABGAP1LQ5R372 815 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 TAF3Q5VWG9 929 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 RAP1GAP2Q684P5 730 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 IL31Q6EBC2 164 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 KIAA1324Q6UXG2 1013 aaKnown RBP13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 TRIM72Q6ZMU5 477 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 FRMD1Q8N878 549 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 CEP76Q8TAP6 659 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 SORCS1Q8WY21 1168 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 PIGKQ92643 395 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 FOXJ1Q92949 421 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 NT5C3BQ969T7 300 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 LMLNQ96KR4 655 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 PRMT1Q99873 361 aaKnown RBP13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 CNOT1A5YKK6 2376 aaKnown RBP13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 CEP192Q8TEP8 1941 aa13.6□□□□□ -0.23
HNRNPC-205ENST00000553300 SYNJ2BP-COX16A0A087WUM0 186 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 A0A1B0GVM2 712 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 TCAF2A6NFQ2 919 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 GDF9O60383 454 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 MMEP08473 750 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 CCDC172P0C7W6 258 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 PRKCHP24723 683 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 CD6P30203 668 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 PTGER3P43115 390 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 COPAP53621 1224 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 NOMO3P69849 1222 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 ZBTB16Q05516 673 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 ZNF33AQ06730 810 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 LMAN2Q12907 356 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 NME3Q13232 169 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 ARID5BQ14865 1188 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 SLC25A52Q3SY17 297 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 SYCP2LQ5T4T6 812 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 FAM102AQ5T9C2 384 aaPredicted RBP13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 PEAR1Q5VY43 1037 aaPredicted RBP13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 XYLT1Q86Y38 959 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 CFAP52Q8N1V2 620 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 OR2T3Q8NH03 318 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 WFDC5Q8TCV5 224 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 CYB5D2Q8WUJ1 264 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 ZNF419Q96HQ0 510 aaPredicted RBP13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 NPY6RQ99463 290 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 NUSAP1Q9BXS6 441 aaKnown RBP13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 WDCPQ9H6R7 721 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 NLRC4Q9NPP4 1024 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 COX16Q9P0S2 106 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 USP36Q9P275 1121 aaKnown RBP13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 XPO7Q9UIA9 1087 aaKnown RBP13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 NOCTQ9UK39 431 aaKnown RBP13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 PILRBQ9UKJ0 227 aa13.59□□□□□ -0.23
HNRNPC-205ENST00000553300 SPTBN2O15020 2390 aa13.58□□□□□ -0.23
HNRNPC-205ENST00000553300 IGLV3-19P01714 112 aa13.58□□□□□ -0.23
HNRNPC-205ENST00000553300 CYP1A1P04798 512 aaPredicted RBP13.58□□□□□ -0.23
HNRNPC-205ENST00000553300 SRPRAP08240 638 aaKnown RBP13.58□□□□□ -0.23
HNRNPC-205ENST00000553300 HLA-EP13747 358 aa13.58□□□□□ -0.23
HNRNPC-205ENST00000553300 CSKP41240 450 aa13.58□□□□□ -0.23
HNRNPC-205ENST00000553300 CXCR3P49682 368 aa13.58□□□□□ -0.23
HNRNPC-205ENST00000553300 KLK7P49862 253 aa13.58□□□□□ -0.23
HNRNPC-205ENST00000553300 TPMTP51580 245 aa13.58□□□□□ -0.23
HNRNPC-205ENST00000553300 RNASE9P60153 205 aaKnown RBP13.58□□□□□ -0.23
HNRNPC-205ENST00000553300 SULT2A1Q06520 285 aa13.58□□□□□ -0.23
HNRNPC-205ENST00000553300 SFSWAPQ12872 951 aaKnown RBP13.58□□□□□ -0.23
HNRNPC-205ENST00000553300 ANO6Q4KMQ2 910 aa13.58□□□□□ -0.23
HNRNPC-205ENST00000553300 WDR45BQ5MNZ6 344 aa13.58□□□□□ -0.23
HNRNPC-205ENST00000553300 STPG1Q5TH74 334 aa13.58□□□□□ -0.23
HNRNPC-205ENST00000553300 SLC23A3Q6PIS1 610 aa13.58□□□□□ -0.23
HNRNPC-205ENST00000553300 APTXQ7Z2E3 356 aaKnown RBP13.58□□□□□ -0.23
HNRNPC-205ENST00000553300 AOPEPQ8N6M6 819 aa13.58□□□□□ -0.23
HNRNPC-205ENST00000553300 CADM4Q8NFZ8 388 aa13.58□□□□□ -0.23
HNRNPC-205ENST00000553300 CPA5Q8WXQ8 436 aa13.58□□□□□ -0.23
HNRNPC-205ENST00000553300 MYEOVQ96EZ4 313 aa13.58□□□□□ -0.23
HNRNPC-205ENST00000553300 RPRD1AQ96P16 312 aaPredicted RBP13.58□□□□□ -0.23
HNRNPC-205ENST00000553300 NUP58Q9BVL2 599 aa13.58□□□□□ -0.23
HNRNPC-205ENST00000553300 HSD3B7Q9H2F3 369 aa13.58□□□□□ -0.23
HNRNPC-205ENST00000553300 SMOC1Q9H4F8 434 aa13.58□□□□□ -0.23
HNRNPC-205ENST00000553300 WSB2Q9NYS7 404 aaPredicted RBP13.58□□□□□ -0.23
HNRNPC-205ENST00000553300 LNP1A1A4G5 178 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 EPHB6O15197 1021 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 PAGE1O75459 146 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 CLDN11O75508 207 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 PTMSP20962 102 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 MMP8P22894 467 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 NNMTP40261 264 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 SULT1E1P49888 294 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 PLK1P53350 603 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 FMO1Q01740 532 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 AUHQ13825 339 aaKnown RBP13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 DUOXA1Q1HG43 343 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 762.7 ms