RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 TRIM16O95361 564 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 LATS1O95835 1130 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 POLR2EP19388 210 aaKnown RBP11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 GPD2P43304 727 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 IL9RQ01113 521 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 KCNJ12Q14500 433 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 TAF5Q15542 800 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 CCDC40Q4G0X9 1142 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 GJB7Q6PEY0 223 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 C19orf48Q6RUI8 117 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 GLRX5Q86SX6 157 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 TAC4Q86UU9 113 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 PROSER1Q86XN7 944 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 DHX40Q8IX18 779 aaKnown RBP11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 APCDD1Q8J025 514 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 CARNMT1Q8N4J0 409 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 EHBP1Q8NDI1 1231 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 FIBINQ8TAL6 211 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 RHBDD1Q8TEB9 315 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 IRGQQ8WZA9 623 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 TTC17Q96AE7 1141 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 DHTKD1Q96HY7 919 aaPredicted RBP11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 SLCO3A1Q9UIG8 710 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 CTNND2Q9UQB3 1225 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 ANKRD6Q9Y2G4 727 aa11.99□□□□□ -0.49
PRPF40B-212ENST00000551111 FAM47DPA6NHR8 397 aa11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 TTC34A8MYJ7 566 aa11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 MID1O15344 667 aa11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 PAPSS1O43252 624 aaPredicted RBP11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 MOCS2O96007 188 aaPredicted RBP11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 WNT1P04628 370 aa11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 ZNF883P0CG24 379 aa11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 VAV1P15498 845 aa11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 RPL34P49207 117 aaKnown RBP11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 SLC11A2P49281 568 aa11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 METAP1P53582 386 aa11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 KCNH2Q12809 1159 aa11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 HNRNPDQ14103 355 aaKnown RBP11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 DCAF6Q58WW2 860 aa11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 ZC3H12AQ5D1E8 599 aaKnown RBP11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 MS4A13Q5J8X5 152 aa11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 C9orf64Q5T6V5 341 aa11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 NUGGCQ68CJ6 796 aa11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 LRSAM1Q6UWE0 723 aa11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 CIR1Q86X95 450 aaPredicted RBP11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 MFN1Q8IWA4 741 aa11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 TRIM59Q8IWR1 403 aa11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 UNC45BQ8IWX7 931 aa11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 NELFBQ8WX92 580 aa11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 HSFY1Q96LI6 401 aa11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 CEP63Q96MT8 703 aa11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 TIGD1Q96MW7 591 aa11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 FAM129BQ96TA1 746 aa11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 BTBD1Q9H0C5 482 aa11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 RSPH9Q9H1X1 276 aaPredicted RBP11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 METTL14Q9HCE5 456 aaKnown RBP11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 ST7Q9NRC1 585 aa11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 LHX6Q9UPM6 363 aa11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 IGSF10Q6WRI0 2623 aa11.98□□□□□ -0.49
PRPF40B-212ENST00000551111 A0A1W2PP55 124 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 FAM149AA5PLN7 773 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 GOLGA6L4A6NEF3 574 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 C10orf142B7Z368 130 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 CBX4O00257 560 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 PLK4O00444 970 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 PSMA7O14818 248 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 DKK1O94907 266 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 CER1O95813 267 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 DNTTP04053 509 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 ATP5BP06576 529 aaKnown RBP11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 CD27P26842 260 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 STK19P49842 368 aaPredicted RBP11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 IRAK1P51617 712 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 AFF3P51826 1226 aaKnown RBP11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 GALCP54803 685 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 CLDN6P56747 220 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 ZNF445P59923 1031 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 COL9A2Q14055 689 aaPredicted RBP11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 MORC3Q14149 939 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 HNRNPA1L2Q32P51 320 aaKnown RBP11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 PITRM1Q5JRX3 1037 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 MPP7Q5T2T1 576 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 RAP1GAP2Q684P5 730 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 ZNF776Q68DI1 518 aaPredicted RBP11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 NCEH1Q6PIU2 408 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 MMAAQ8IVH4 418 aaKnown RBP11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 LGI2Q8N0V4 545 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 HJURPQ8NCD3 748 aaPredicted RBP11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 AZIN2Q96A70 460 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 FAM149B1Q96BN6 582 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 RPL10LQ96L21 214 aaKnown RBP11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 SLC6A18Q96N87 628 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 MED15Q96RN5 788 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 SLC4A5Q9BY07 1137 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 INTS2Q9H0H0 1204 aaKnown RBP11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 PCED1AQ9H1Q7 454 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 NEUROG2Q9H2A3 272 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 PABPC3Q9H361 631 aaKnown RBP11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 FBXL12Q9NXK8 326 aa11.97□□□□□ -0.49
PRPF40B-212ENST00000551111 SUN2Q9UH99 717 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms