RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 SNX17Q15036 470 aa14.02□□□□□ -0.16
PRPF40B-209ENST00000548825 ZNF534Q76KX8 674 aa14.02□□□□□ -0.16
PRPF40B-209ENST00000548825 SDCCAG8Q86SQ7 713 aaPredicted RBP14.02□□□□□ -0.16
PRPF40B-209ENST00000548825 MAML3Q96JK9 1138 aa14.02□□□□□ -0.16
PRPF40B-209ENST00000548825 PHACTR1Q9C0D0 580 aa14.02□□□□□ -0.16
PRPF40B-209ENST00000548825 PLEKHA5Q9HAU0 1116 aa14.02□□□□□ -0.16
PRPF40B-209ENST00000548825 KIAA1257Q9ULG3 409 aa14.02□□□□□ -0.16
PRPF40B-209ENST00000548825 IPPQ9Y573 584 aa14.02□□□□□ -0.16
PRPF40B-209ENST00000548825 TTC3P53804 2025 aa14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 CCL22O00626 93 aa14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 MT-CYBP00156 380 aaPredicted RBP14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 POLBP06746 335 aa14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 BPGMP07738 259 aa14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 PTPN1P18031 435 aaKnown RBP14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 MATKP42679 507 aa14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 SCNN1GP51170 649 aa14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 PLK1P53350 603 aa14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 SLC9A4Q6AI14 798 aa14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 ACVR1CQ8NER5 493 aa14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 BRI3BPQ8WY22 251 aa14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 INPP5DQ92835 1189 aa14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 FRMD8P1Q9BZ68 369 aaPredicted RBP14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 TASP1Q9H6P5 420 aa14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 AK5Q9Y6K8 562 aa14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 TTC24A2A3L6 582 aaPredicted RBP14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 BCLAF3A2AJT9 711 aaKnown RBP14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 MSI1O43347 362 aaKnown RBP14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 SPAG6O75602 509 aa14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 PGK1P00558 417 aa14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 DARSP14868 501 aaKnown RBP14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 CACNA2D1P54289 1103 aa14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 DCAF4L1Q3SXM0 396 aa14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 EFHC1Q5JVL4 640 aa14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 CXCL17Q6UXB2 119 aa14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 SCUBE1Q8IWY4 988 aa14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 GPR152Q8TDT2 470 aa14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 FBXO41Q8TF61 875 aa14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 TKTL2Q9H0I9 626 aa14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 DCLRE1BQ9H816 532 aa14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 PPCSQ9HAB8 311 aa14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 CYP4F12Q9HCS2 524 aa14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 PCDHA11Q9Y5I1 949 aa14.02□□□□□ -0.17
PRPF40B-209ENST00000548825 ANKRD12Q6UB98 2062 aa14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 HMBSP08397 361 aa14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 NFKB1P19838 968 aa14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 ABL2P42684 1182 aa14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 BRCC3P46736 316 aa14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 CLCNKBP51801 687 aa14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 CCDC15Q0P6D6 951 aa14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 CTBP1Q13363 440 aa14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 MFSD10Q14728 455 aa14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 PDCD2Q16342 344 aaPredicted RBP14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 CTC1Q2NKJ3 1217 aa14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 RIPOR1Q6ZS17 1223 aa14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 RYBPQ8N488 228 aaPredicted RBP14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 MCUQ8NE86 351 aa14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 SENP8Q96LD8 212 aa14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 ZNF560Q96MR9 790 aa14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 DHRS4Q9BTZ2 278 aa14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 GEMIN8Q9NWZ8 242 aaKnown RBP14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 VANGL2Q9ULK5 521 aa14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 HBS1LQ9Y450 684 aaKnown RBP14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 BUD23O43709 281 aaKnown RBP14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 OR4Q2P0C623 313 aa14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 RALBP11234 206 aa14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 NPR3P17342 541 aa14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 SKIV2L2P42285 1042 aaKnown RBP14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 SLC18A2Q05940 514 aa14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 DUSP28Q4G0W2 176 aa14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 GNASQ5JWF2 1037 aa14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 RPS27LQ71UM5 84 aaKnown RBP14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 SLC26A9Q7LBE3 791 aa14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 WDCPQ9H6R7 721 aa14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 VTA1Q9NP79 307 aa14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 ANLNQ9NQW6 1124 aa14.01□□□□□ -0.17
PRPF40B-209ENST00000548825 ZFXP17010 805 aaPredicted RBP14□□□□□ -0.17
PRPF40B-209ENST00000548825 TSPAN8P19075 237 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 PDK1Q15118 436 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 DPYSL2Q16555 572 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 PARP6Q2NL67 630 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 NOMO2Q5JPE7 1267 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 OLFML2BQ68BL8 750 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 TFAP2DQ7Z6R9 452 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 SCAMP5Q8TAC9 235 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 FCRL3Q96P31 734 aaPredicted RBP14□□□□□ -0.17
PRPF40B-209ENST00000548825 AP5M1Q9H0R1 490 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 ABHD16BQ9H3Z7 469 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 SFMBT1Q9UHJ3 866 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 A0A096LPK6 155 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 F8W810 466 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 TK2O00142 265 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 PPP1R12AO14974 1030 aaPredicted RBP14□□□□□ -0.17
PRPF40B-209ENST00000548825 MDM4O15151 490 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 MAP3K7O43318 606 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 PSMG1O95456 288 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 USP10Q14694 798 aaKnown RBP14□□□□□ -0.17
PRPF40B-209ENST00000548825 ZNF792Q3KQV3 632 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 ZNF280DQ6N043 979 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 TLDC1Q6P9B6 456 aa14□□□□□ -0.17
PRPF40B-209ENST00000548825 ARHGAP36Q6ZRI8 547 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms