RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 C6orf222P0C671 652 aaPredicted RBP15.19■□□□□ 0.02
DDX55-209ENST00000542286 TROVE2P10155 538 aaKnown RBP eCLIP15.19■□□□□ 0.02
DDX55-209ENST00000542286 NPR3P17342 541 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 SLC25A52Q3SY17 297 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 FOXB2Q5VYV0 432 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 CXCL17Q6UXB2 119 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 ATG14Q6ZNE5 492 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 ZNF567Q8N184 647 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 SIX6OS1Q8N1H7 587 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 TTC39CQ8N584 583 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 NPWQ8N729 165 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 DUSP16Q9BY84 665 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 TRIM55Q9BYV6 548 aa15.19■□□□□ 0.02
DDX55-209ENST00000542286 C2CD2LO14523 706 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 NDC80O14777 642 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 DCTN3O75935 186 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 KRT37O76014 449 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 PGK1P00558 417 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 CD4P01730 458 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 DLDP09622 509 aaKnown RBP15.18■□□□□ 0.02
DDX55-209ENST00000542286 KCNA4P22459 653 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 PRKCHP24723 683 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 MAGEA3P43357 314 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 DEUP1Q05D60 604 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 RCN2Q14257 317 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 PPP2R5DQ14738 602 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 KHDC1Q4VXA5 237 aaKnown RBP15.18■□□□□ 0.02
DDX55-209ENST00000542286 OR52K1Q8NGK4 314 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 GSDMBQ8TAX9 411 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 CELF6Q96J87 481 aaKnown RBP15.18■□□□□ 0.02
DDX55-209ENST00000542286 OLFM3Q96PB7 478 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 NMUR2Q9GZQ4 415 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 STOML1Q9UBI4 398 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 NUDT5Q9UKK9 219 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 PLLPQ9Y342 182 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 CAPN9O14815 690 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 DGKIO75912 1065 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 RANBP1P43487 201 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 RASSF2P50749 326 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 SCNN1GP51170 649 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 RPL10AP62906 217 aaKnown RBP15.18■□□□□ 0.02
DDX55-209ENST00000542286 WASHC5Q12768 1159 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 CCDC6Q16204 474 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 ZMIZ2Q8NF64 920 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 FBXO41Q8TF61 875 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 PCED1BQ96HM7 432 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 SENP8Q96LD8 212 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 ZNF560Q96MR9 790 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 SMOQ99835 787 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 PHACTR1Q9C0D0 580 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 SSU72Q9NP77 194 aaKnown RBP15.18■□□□□ 0.02
DDX55-209ENST00000542286 GDAP2Q9NXN4 497 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 LRCH1Q9Y2L9 728 aa15.18■□□□□ 0.02
DDX55-209ENST00000542286 A0A0A0MRY4 1105 aa15.17■□□□□ 0.02
DDX55-209ENST00000542286 XPO1O14980 1071 aaKnown RBP15.17■□□□□ 0.02
DDX55-209ENST00000542286 NCAM1P13591 858 aa15.17■□□□□ 0.02
DDX55-209ENST00000542286 DESP17661 470 aa15.17■□□□□ 0.02
DDX55-209ENST00000542286 TPH1P17752 444 aa15.17■□□□□ 0.02
DDX55-209ENST00000542286 VHLP40337 213 aa15.17■□□□□ 0.02
DDX55-209ENST00000542286 MAP2K5Q13163 448 aa15.17■□□□□ 0.02
DDX55-209ENST00000542286 PID1Q7Z2X4 250 aa15.17■□□□□ 0.02
DDX55-209ENST00000542286 CMC1Q7Z7K0 106 aa15.17■□□□□ 0.02
DDX55-209ENST00000542286 SHKBP1Q8TBC3 707 aa15.17■□□□□ 0.02
DDX55-209ENST00000542286 ARNTL2Q8WYA1 636 aa15.17■□□□□ 0.02
DDX55-209ENST00000542286 SPATA13Q96N96 652 aa15.17■□□□□ 0.02
DDX55-209ENST00000542286 EBF4Q9BQW3 602 aa15.17■□□□□ 0.02
DDX55-209ENST00000542286 TSPYL2Q9H2G4 693 aaPredicted RBP15.17■□□□□ 0.02
DDX55-209ENST00000542286 PPCSQ9HAB8 311 aa15.17■□□□□ 0.02
DDX55-209ENST00000542286 C17orf102A2RUQ5 167 aa15.17■□□□□ 0.02
DDX55-209ENST00000542286 EEF2KO00418 725 aaKnown RBP15.17■□□□□ 0.02
DDX55-209ENST00000542286 ITM2AO43736 263 aa15.17■□□□□ 0.02
DDX55-209ENST00000542286 POMCP01189 267 aa15.17■□□□□ 0.02
DDX55-209ENST00000542286 SV2CQ496J9 727 aa15.17■□□□□ 0.02
DDX55-209ENST00000542286 ZDHHC17Q8IUH5 632 aa15.17■□□□□ 0.02
DDX55-209ENST00000542286 USP33Q8TEY7 942 aa15.17■□□□□ 0.02
DDX55-209ENST00000542286 SH3TC2Q8TF17 1288 aa15.17■□□□□ 0.02
DDX55-209ENST00000542286 ALKBH8Q96BT7 664 aaKnown RBP15.17■□□□□ 0.02
DDX55-209ENST00000542286 TRAPPC9Q96Q05 1148 aa15.17■□□□□ 0.02
DDX55-209ENST00000542286 TMEM209Q96SK2 561 aa15.17■□□□□ 0.02
DDX55-209ENST00000542286 PCDHA11Q9Y5I1 949 aa15.17■□□□□ 0.02
DDX55-209ENST00000542286 FAM159BA6NKW6 160 aa15.16■□□□□ 0.02
DDX55-209ENST00000542286 TPP1O14773 563 aa15.16■□□□□ 0.02
DDX55-209ENST00000542286 LMNAP02545 664 aaKnown RBP15.16■□□□□ 0.02
DDX55-209ENST00000542286 ALDOAP04075 364 aaKnown RBP15.16■□□□□ 0.02
DDX55-209ENST00000542286 ERCC2P18074 760 aa15.16■□□□□ 0.02
DDX55-209ENST00000542286 SEMA5AQ13591 1074 aa15.16■□□□□ 0.02
DDX55-209ENST00000542286 EFHC1Q5JVL4 640 aa15.16■□□□□ 0.02
DDX55-209ENST00000542286 SNX30Q5VWJ9 437 aa15.16■□□□□ 0.02
DDX55-209ENST00000542286 DSTYKQ6XUX3 929 aa15.16■□□□□ 0.02
DDX55-209ENST00000542286 RINLQ6ZS11 566 aa15.16■□□□□ 0.02
DDX55-209ENST00000542286 NUDCD3Q8IVD9 361 aa15.16■□□□□ 0.02
DDX55-209ENST00000542286 TNIP3Q96KP6 325 aa15.16■□□□□ 0.02
DDX55-209ENST00000542286 FCRL3Q96P31 734 aaPredicted RBP15.16■□□□□ 0.02
DDX55-209ENST00000542286 NPY6RQ99463 290 aa15.16■□□□□ 0.02
DDX55-209ENST00000542286 HNRNPABQ99729 332 aaKnown RBP15.16■□□□□ 0.02
DDX55-209ENST00000542286 PNPLA8Q9NP80 782 aa15.16■□□□□ 0.02
DDX55-209ENST00000542286 ST3GAL5Q9UNP4 418 aa15.16■□□□□ 0.02
DDX55-209ENST00000542286 CDY2AQ9Y6F7 541 aa15.16■□□□□ 0.02
DDX55-209ENST00000542286 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.16■□□□□ 0.02
DDX55-209ENST00000542286 SMAPO00193 183 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms