RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 BBS5Q8N3I7 341 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 CPSF7Q8N684 471 aaKnown RBP7.74□□□□□ -1.17
HDAC3-216ENST00000523088 PLD5Q8N7P1 536 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 ATP6V0D2Q8N8Y2 350 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 MFSD2AQ8NA29 543 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 OR6J1Q8NGC5 347 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 CEP76Q8TAP6 659 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 ZNF507Q8TCN5 953 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 ADAMTS16Q8TE57 1224 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 ADAMTS18Q8TE60 1221 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 CHAC2Q8WUX2 184 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 SCFD1Q8WVM8 642 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 ASZ1Q8WWH4 475 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 RFKQ969G6 155 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 MARVELD3Q96A59 401 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 EME1Q96AY2 570 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 TRIM43Q96BQ3 446 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-216ENST00000523088 ZNF845Q96IR2 970 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-216ENST00000523088 PPP1R13BQ96KQ4 1090 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 CLIC6Q96NY7 704 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 TM9SF2Q99805 663 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 SLC29A1Q99808 456 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 ZKSCAN3Q9BRR0 538 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 MTG1Q9BT17 334 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-216ENST00000523088 STK33Q9BYT3 514 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 GRIP2Q9C0E4 1043 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 WDR12Q9GZL7 423 aaKnown RBP7.74□□□□□ -1.17
HDAC3-216ENST00000523088 CCDC86Q9H6F5 360 aaKnown RBP7.74□□□□□ -1.17
HDAC3-216ENST00000523088 TMEM206Q9H813 350 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 FAM204AQ9H8W3 233 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 TRIM45Q9H8W5 580 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-216ENST00000523088 GORASP2Q9H8Y8 452 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 PIDD1Q9HB75 910 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 RPRD1BQ9NQG5 326 aaKnown RBP7.74□□□□□ -1.17
HDAC3-216ENST00000523088 INTS7Q9NVH2 962 aaKnown RBP7.74□□□□□ -1.17
HDAC3-216ENST00000523088 MTMR10Q9NXD2 777 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 ZNHIT2Q9UHR6 403 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 VPS51Q9UID3 782 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 SCOCQ9UIL1 159 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 MBD1Q9UIS9 605 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-216ENST00000523088 RNF112Q9ULX5 631 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 PHTF1Q9UMS5 762 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 MTMR6Q9Y217 621 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 ERGIC3Q9Y282 383 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 MYO9BQ13459 2157 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 ASTN1O14525 1302 aa7.74□□□□□ -1.17
HDAC3-216ENST00000523088 BAZ2BQ9UIF8 2168 aaKnown RBP7.73□□□□□ -1.17
HDAC3-216ENST00000523088 KAT6AQ92794 2004 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 COL6A3P12111 3177 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-216ENST00000523088 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-216ENST00000523088 SYCE3A1L190 88 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 PMS2P1A4D2B8 440 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 LRRC14BA6NHZ5 514 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 ARGFXA6NJG6 315 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 ZNF879B4DU55 563 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 KLRF2D3W0D1 207 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 PRSS44E7EML9 344 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 E7EVH7 732 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 H0Y858 1186 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 H3BM21 787 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 IFIT3O14879 490 aaKnown RBP7.73□□□□□ -1.17
HDAC3-216ENST00000523088 PCDH17O14917 1159 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 ZBTB5O15062 677 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 DYNC1LI2O43237 492 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-216ENST00000523088 ADCY6O43306 1168 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 PI15O43692 258 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 BRINP1O60477 761 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 MAFKO60675 156 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 CNOT3O75175 753 aaKnown RBP7.73□□□□□ -1.17
HDAC3-216ENST00000523088 PSIP1O75475 530 aaKnown RBP7.73□□□□□ -1.17
HDAC3-216ENST00000523088 JRKO75564 520 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 RFPL1O75677 317 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 PDE5AO76074 875 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 DDAH1O94760 285 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 CHEK2O96017 543 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 GLAP06280 429 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 PYGMP11217 842 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 PABPC1P11940 636 aaKnown RBP7.73□□□□□ -1.17
HDAC3-216ENST00000523088 ACADSP16219 412 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 ITGB6P18564 788 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 ATP6V1C1P21283 382 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 RFC2P35250 354 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 AFMP43652 599 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 PCYT1AP49585 367 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 RNF144AP50876 292 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-216ENST00000523088 HNRNPFP52597 415 aaKnown RBP7.73□□□□□ -1.17
HDAC3-216ENST00000523088 IST1P53990 364 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 ATXN1P54253 815 aaKnown RBP7.73□□□□□ -1.17
HDAC3-216ENST00000523088 ATP12AP54707 1039 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 SNAP25P60880 206 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 ASIC1P78348 528 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 ABATP80404 500 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 OCA2Q04671 838 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 ZNF268Q14587 947 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-216ENST00000523088 HERC3Q15034 1050 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 SLC39A14Q15043 492 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 SEC23AQ15436 765 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 CYTH1Q15438 398 aa7.73□□□□□ -1.17
HDAC3-216ENST00000523088 SHHQ15465 462 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms