RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 ETV4P43268 484 aa18.84■□□□□ 0.61
SDC2-202ENST00000518385 TUSC3Q13454 348 aa18.84■□□□□ 0.61
SDC2-202ENST00000518385 FASTKD3Q14CZ7 662 aaKnown RBP18.84■□□□□ 0.61
SDC2-202ENST00000518385 RCN1Q15293 331 aa18.84■□□□□ 0.61
SDC2-202ENST00000518385 TCTN1Q2MV58 587 aa18.84■□□□□ 0.61
SDC2-202ENST00000518385 PIGZQ86VD9 579 aa18.84■□□□□ 0.61
SDC2-202ENST00000518385 METTL23Q86XA0 190 aa18.84■□□□□ 0.61
SDC2-202ENST00000518385 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.84■□□□□ 0.61
SDC2-202ENST00000518385 SLC44A1Q8WWI5 657 aa18.84■□□□□ 0.61
SDC2-202ENST00000518385 RSAD2Q8WXG1 361 aa18.84■□□□□ 0.61
SDC2-202ENST00000518385 CPT1BQ92523 772 aa18.84■□□□□ 0.61
SDC2-202ENST00000518385 MTBPQ96DY7 904 aa18.84■□□□□ 0.61
SDC2-202ENST00000518385 DTNBP1Q96EV8 351 aa18.84■□□□□ 0.61
SDC2-202ENST00000518385 SYT15Q9BQS2 421 aa18.84■□□□□ 0.61
SDC2-202ENST00000518385 TMEM120AQ9BXJ8 343 aa18.84■□□□□ 0.61
SDC2-202ENST00000518385 WWP1Q9H0M0 922 aa18.84■□□□□ 0.61
SDC2-202ENST00000518385 C1orf21Q9H246 121 aa18.84■□□□□ 0.61
SDC2-202ENST00000518385 FAM96AQ9H5X1 160 aa18.84■□□□□ 0.61
SDC2-202ENST00000518385 LRRC4Q9HBW1 653 aa18.84■□□□□ 0.61
SDC2-202ENST00000518385 TMEM161AQ9NX61 479 aa18.84■□□□□ 0.61
SDC2-202ENST00000518385 KANSL3Q9P2N6 904 aa18.84■□□□□ 0.61
SDC2-202ENST00000518385 CFAP69A5D8W1 941 aa18.83■□□□□ 0.6
SDC2-202ENST00000518385 KLHL33A6NCF5 533 aa18.83■□□□□ 0.6
SDC2-202ENST00000518385 TRDMT1O14717 391 aaKnown RBP18.83■□□□□ 0.6
SDC2-202ENST00000518385 HCRTO43612 131 aa18.83■□□□□ 0.6
SDC2-202ENST00000518385 FKBP6O75344 327 aa18.83■□□□□ 0.6
SDC2-202ENST00000518385 DAB1O75553 588 aa18.83■□□□□ 0.6
SDC2-202ENST00000518385 LCP1P13796 627 aa18.83■□□□□ 0.6
SDC2-202ENST00000518385 TKTP29401 623 aaKnown RBP18.83■□□□□ 0.6
SDC2-202ENST00000518385 HDAC4P56524 1084 aa18.83■□□□□ 0.6
SDC2-202ENST00000518385 XIAPP98170 497 aa18.83■□□□□ 0.6
SDC2-202ENST00000518385 NOMO1Q15155 1222 aa18.83■□□□□ 0.6
SDC2-202ENST00000518385 TAF5Q15542 800 aa18.83■□□□□ 0.6
SDC2-202ENST00000518385 KHDC1Q4VXA5 237 aaKnown RBP18.83■□□□□ 0.6
SDC2-202ENST00000518385 SH3PXD2AQ5TCZ1 1133 aa18.83■□□□□ 0.6
SDC2-202ENST00000518385 AAGABQ6PD74 315 aa18.83■□□□□ 0.6
SDC2-202ENST00000518385 PAQR9Q6ZVX9 377 aa18.83■□□□□ 0.6
SDC2-202ENST00000518385 PRUNE1Q86TP1 453 aa18.83■□□□□ 0.6
SDC2-202ENST00000518385 SPDYE1Q8NFV5 336 aaPredicted RBP18.83■□□□□ 0.6
SDC2-202ENST00000518385 FAF2Q96CS3 445 aa18.83■□□□□ 0.6
SDC2-202ENST00000518385 IFT43Q96FT9 208 aa18.83■□□□□ 0.6
SDC2-202ENST00000518385 OXNAD1Q96HP4 312 aaPredicted RBP18.83■□□□□ 0.6
SDC2-202ENST00000518385 ZNF184Q99676 751 aaPredicted RBP18.83■□□□□ 0.6
SDC2-202ENST00000518385 LPIN3Q9BQK8 851 aa18.83■□□□□ 0.6
SDC2-202ENST00000518385 MED10Q9BTT4 135 aa18.83■□□□□ 0.6
SDC2-202ENST00000518385 B3GNT5Q9BYG0 378 aa18.83■□□□□ 0.6
SDC2-202ENST00000518385 VCX3BQ9H321 246 aa18.83■□□□□ 0.6
SDC2-202ENST00000518385 TANC1Q9C0D5 1861 aa18.83■□□□□ 0.6
SDC2-202ENST00000518385 SCN5AQ14524 2016 aa18.82■□□□□ 0.6
SDC2-202ENST00000518385 HGSO14964 777 aaPredicted RBP18.82■□□□□ 0.6
SDC2-202ENST00000518385 POMCP01189 267 aa18.82■□□□□ 0.6
SDC2-202ENST00000518385 INHBAP08476 426 aa18.82■□□□□ 0.6
SDC2-202ENST00000518385 CD48P09326 243 aa18.82■□□□□ 0.6
SDC2-202ENST00000518385 DLDP09622 509 aaKnown RBP18.82■□□□□ 0.6
SDC2-202ENST00000518385 NOS2P35228 1153 aa18.82■□□□□ 0.6
SDC2-202ENST00000518385 EIF3EP60228 445 aaKnown RBP18.82■□□□□ 0.6
SDC2-202ENST00000518385 MRPS5P82675 430 aaKnown RBP18.82■□□□□ 0.6
SDC2-202ENST00000518385 DPYSL2Q16555 572 aa18.82■□□□□ 0.6
SDC2-202ENST00000518385 CDO1Q16878 200 aa18.82■□□□□ 0.6
SDC2-202ENST00000518385 SLC25A52Q3SY17 297 aa18.82■□□□□ 0.6
SDC2-202ENST00000518385 TTC39BQ5VTQ0 682 aaPredicted RBP18.82■□□□□ 0.6
SDC2-202ENST00000518385 OR52E8Q6IFG1 317 aa18.82■□□□□ 0.6
SDC2-202ENST00000518385 SCYL2Q6P3W7 929 aa18.82■□□□□ 0.6
SDC2-202ENST00000518385 DCLRE1AQ6PJP8 1040 aa18.82■□□□□ 0.6
SDC2-202ENST00000518385 GLB1LQ6UWU2 654 aa18.82■□□□□ 0.6
SDC2-202ENST00000518385 KYAT3Q6YP21 454 aaKnown RBP18.82■□□□□ 0.6
SDC2-202ENST00000518385 TET1Q8NFU7 2136 aa18.82■□□□□ 0.6
SDC2-202ENST00000518385 SCG3Q8WXD2 468 aaKnown RBP18.82■□□□□ 0.6
SDC2-202ENST00000518385 LRRC39Q96DD0 335 aa18.82■□□□□ 0.6
SDC2-202ENST00000518385 FAM118BQ9BPY3 351 aa18.82■□□□□ 0.6
SDC2-202ENST00000518385 ACBD6Q9BR61 282 aa18.82■□□□□ 0.6
SDC2-202ENST00000518385 PCDH18Q9HCL0 1135 aa18.82■□□□□ 0.6
SDC2-202ENST00000518385 ARL8BQ9NVJ2 186 aa18.82■□□□□ 0.6
SDC2-202ENST00000518385 RCOR3Q9P2K3 495 aaPredicted RBP18.82■□□□□ 0.6
SDC2-202ENST00000518385 SLC4A7Q9Y6M7 1214 aa18.82■□□□□ 0.6
SDC2-202ENST00000518385 M0QZQ0 153 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 APOL1O14791 398 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 CAPN9O14815 690 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 CHADO15335 359 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 KRT37O76014 449 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 RFC2P35250 354 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 PEX19P40855 299 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 YWHAZP63104 245 aaKnown RBP18.81■□□□□ 0.6
SDC2-202ENST00000518385 DYNLT1P63172 113 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 ACSBG2Q5FVE4 666 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 MDH1BQ5I0G3 518 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 CLLU1OSQ5K130 101 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 SLC9A4Q6AI14 798 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 CLEC20AQ6ZU45 233 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 SIX6OS1Q8N1H7 587 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 GLIS1Q8NBF1 620 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 FBXO36Q8NEA4 188 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 RFWD2Q8NHY2 731 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 PIP4K2CQ8TBX8 421 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 NT5C3BQ969T7 300 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 TMEM121Q9BTD3 319 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 SNRNP25Q9BV90 132 aaKnown RBP18.81■□□□□ 0.6
SDC2-202ENST00000518385 IQCGQ9H095 443 aaKnown RBP18.81■□□□□ 0.6
SDC2-202ENST00000518385 CRTAC1Q9NQ79 661 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 RRN3Q9NYV6 651 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms