RNA–Protein interactions for RNA: ENST00000506951.5

PACRGL-217, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-217ENST00000506951 PCED1AQ9H1Q7 454 aa22.7■■□□□ 1.22
PACRGL-217ENST00000506951 TMEM74BQ9NUR3 256 aa22.7■■□□□ 1.22
PACRGL-217ENST00000506951 WSB2Q9NYS7 404 aaPredicted RBP22.7■■□□□ 1.22
PACRGL-217ENST00000506951 KIAA1522Q9P206 1035 aaPredicted RBP22.7■■□□□ 1.22
PACRGL-217ENST00000506951 STAP1Q9ULZ2 295 aa22.7■■□□□ 1.22
PACRGL-217ENST00000506951 PAXBP1Q9Y5B6 917 aa22.7■■□□□ 1.22
PACRGL-217ENST00000506951 ATXN2Q99700 1313 aaKnown RBP22.7■■□□□ 1.22
PACRGL-217ENST00000506951 SPTBN2O15020 2390 aa22.7■■□□□ 1.22
PACRGL-217ENST00000506951 LAMA1P25391 3075 aa22.69■■□□□ 1.22
PACRGL-217ENST00000506951 CNOT1A5YKK6 2376 aaKnown RBP22.69■■□□□ 1.22
PACRGL-217ENST00000506951 MEI4A8MW99 385 aa22.69■■□□□ 1.22
PACRGL-217ENST00000506951 LSM8O95777 96 aaKnown RBP22.69■■□□□ 1.22
PACRGL-217ENST00000506951 ERBB2P04626 1255 aa22.69■■□□□ 1.22
PACRGL-217ENST00000506951 CDH5P33151 784 aaPredicted RBP22.69■■□□□ 1.22
PACRGL-217ENST00000506951 NOS2P35228 1153 aa22.69■■□□□ 1.22
PACRGL-217ENST00000506951 SCNN1AP37088 669 aa22.69■■□□□ 1.22
PACRGL-217ENST00000506951 EIF4EBP2Q13542 120 aaPredicted RBP22.69■■□□□ 1.22
PACRGL-217ENST00000506951 SLC12A1Q13621 1099 aa22.69■■□□□ 1.22
PACRGL-217ENST00000506951 PTPRNQ16849 979 aa22.69■■□□□ 1.22
PACRGL-217ENST00000506951 TTC31Q49AM3 519 aaPredicted RBP22.69■■□□□ 1.22
PACRGL-217ENST00000506951 CDKAL1Q5VV42 579 aa22.69■■□□□ 1.22
PACRGL-217ENST00000506951 RGL4Q8IZJ4 473 aa22.69■■□□□ 1.22
PACRGL-217ENST00000506951 WFDC5Q8TCV5 224 aa22.69■■□□□ 1.22
PACRGL-217ENST00000506951 GPT2Q8TD30 523 aa22.69■■□□□ 1.22
PACRGL-217ENST00000506951 TOE1Q96GM8 510 aaKnown RBP22.69■■□□□ 1.22
PACRGL-217ENST00000506951 PPP1R9BQ96SB3 815 aa22.69■■□□□ 1.22
PACRGL-217ENST00000506951 TAB2Q9NYJ8 693 aa22.69■■□□□ 1.22
PACRGL-217ENST00000506951 F8VZ95 297 aa22.68■■□□□ 1.22
PACRGL-217ENST00000506951 SYPP08247 313 aa22.68■■□□□ 1.22
PACRGL-217ENST00000506951 PNMA6AP0CW24 399 aaPredicted RBP22.68■■□□□ 1.22
PACRGL-217ENST00000506951 HLA-EP13747 358 aa22.68■■□□□ 1.22
PACRGL-217ENST00000506951 ENGP17813 658 aa22.68■■□□□ 1.22
PACRGL-217ENST00000506951 SFSWAPQ12872 951 aaKnown RBP22.68■■□□□ 1.22
PACRGL-217ENST00000506951 TAF5Q15542 800 aa22.68■■□□□ 1.22
PACRGL-217ENST00000506951 STX1AQ16623 288 aa22.68■■□□□ 1.22
PACRGL-217ENST00000506951 PTPN20Q4JDL3 420 aa22.68■■□□□ 1.22
PACRGL-217ENST00000506951 DPY19L2P1Q6NXN4 242 aa22.68■■□□□ 1.22
PACRGL-217ENST00000506951 SLC41A1Q8IVJ1 513 aa22.68■■□□□ 1.22
PACRGL-217ENST00000506951 DEFB119Q8N690 84 aa22.68■■□□□ 1.22
PACRGL-217ENST00000506951 NAA15Q9BXJ9 866 aaKnown RBP22.68■■□□□ 1.22
PACRGL-217ENST00000506951 A0A1B0GVM2 712 aa22.67■■□□□ 1.22
PACRGL-217ENST00000506951 TCAF2A6NFQ2 919 aa22.67■■□□□ 1.22
PACRGL-217ENST00000506951 GRAP2O75791 330 aa22.67■■□□□ 1.22
PACRGL-217ENST00000506951 DNTTP04053 509 aa22.67■■□□□ 1.22
PACRGL-217ENST00000506951 SRPRAP08240 638 aaKnown RBP22.67■■□□□ 1.22
PACRGL-217ENST00000506951 C7P10643 843 aa22.67■■□□□ 1.22
PACRGL-217ENST00000506951 CSKP41240 450 aa22.67■■□□□ 1.22
PACRGL-217ENST00000506951 MATKP42679 507 aa22.67■■□□□ 1.22
PACRGL-217ENST00000506951 PITRM1Q5JRX3 1037 aa22.67■■□□□ 1.22
PACRGL-217ENST00000506951 ACBD5Q5T8D3 534 aaPredicted RBP22.67■■□□□ 1.22
PACRGL-217ENST00000506951 RNF219Q5W0B1 726 aaPredicted RBP22.67■■□□□ 1.22
PACRGL-217ENST00000506951 SND1Q7KZF4 910 aaKnown RBP eCLIP22.67■■□□□ 1.22
PACRGL-217ENST00000506951 ZNF677Q86XU0 584 aa22.67■■□□□ 1.22
PACRGL-217ENST00000506951 CFAP52Q8N1V2 620 aa22.67■■□□□ 1.22
PACRGL-217ENST00000506951 C18orf8Q96DM3 657 aa22.67■■□□□ 1.22
PACRGL-217ENST00000506951 LMLNQ96KR4 655 aa22.67■■□□□ 1.22
PACRGL-217ENST00000506951 GPR174Q9BXC1 333 aa22.67■■□□□ 1.22
PACRGL-217ENST00000506951 XPO7Q9UIA9 1087 aaKnown RBP22.67■■□□□ 1.22
PACRGL-217ENST00000506951 SCML1Q9UN30 329 aa22.67■■□□□ 1.22
PACRGL-217ENST00000506951 SYNJ2BP-COX16A0A087WUM0 186 aa22.66■■□□□ 1.22
PACRGL-217ENST00000506951 CDX4O14627 284 aaPredicted RBP22.66■■□□□ 1.22
PACRGL-217ENST00000506951 RNASEH1O60930 286 aaKnown RBP22.66■■□□□ 1.22
PACRGL-217ENST00000506951 NNMTP40261 264 aa22.66■■□□□ 1.22
PACRGL-217ENST00000506951 PITX1P78337 314 aaPredicted RBP22.66■■□□□ 1.22
PACRGL-217ENST00000506951 MYL5Q02045 173 aa22.66■■□□□ 1.22
PACRGL-217ENST00000506951 SULT2A1Q06520 285 aa22.66■■□□□ 1.22
PACRGL-217ENST00000506951 NME3Q13232 169 aa22.66■■□□□ 1.22
PACRGL-217ENST00000506951 ARID5BQ14865 1188 aa22.66■■□□□ 1.22
PACRGL-217ENST00000506951 KRT31Q15323 416 aa22.66■■□□□ 1.22
PACRGL-217ENST00000506951 ZNF776Q68DI1 518 aaPredicted RBP22.66■■□□□ 1.22
PACRGL-217ENST00000506951 ERICH1Q86X53 443 aa22.66■■□□□ 1.22
PACRGL-217ENST00000506951 VPS16Q9H269 839 aa22.66■■□□□ 1.22
PACRGL-217ENST00000506951 CAPN10Q9HC96 672 aa22.66■■□□□ 1.22
PACRGL-217ENST00000506951 CD93Q9NPY3 652 aa22.66■■□□□ 1.22
PACRGL-217ENST00000506951 PRSS16Q9NQE7 514 aa22.66■■□□□ 1.22
PACRGL-217ENST00000506951 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.66■■□□□ 1.22
PACRGL-217ENST00000506951 COX16Q9P0S2 106 aa22.66■■□□□ 1.22
PACRGL-217ENST00000506951 NYNRINQ9P2P1 1898 aaKnown RBP22.66■■□□□ 1.22
PACRGL-217ENST00000506951 M0QYT0 321 aa22.65■■□□□ 1.22
PACRGL-217ENST00000506951 KCNK5O95279 499 aa22.65■■□□□ 1.22
PACRGL-217ENST00000506951 F9P00740 461 aa22.65■■□□□ 1.22
PACRGL-217ENST00000506951 MAPK8P45983 427 aa22.65■■□□□ 1.22
PACRGL-217ENST00000506951 GABRB2P47870 512 aa22.65■■□□□ 1.22
PACRGL-217ENST00000506951 HNRNPA1L2Q32P51 320 aaKnown RBP22.65■■□□□ 1.22
PACRGL-217ENST00000506951 PLEKHG6Q3KR16 790 aa22.65■■□□□ 1.22
PACRGL-217ENST00000506951 BRMS1LQ5PSV4 323 aa22.65■■□□□ 1.22
PACRGL-217ENST00000506951 CCDC183Q5T5S1 534 aa22.65■■□□□ 1.22
PACRGL-217ENST00000506951 CACUL1Q86Y37 369 aa22.65■■□□□ 1.22
PACRGL-217ENST00000506951 HDDC3Q8N4P3 179 aa22.65■■□□□ 1.22
PACRGL-217ENST00000506951 PRMT1Q99873 361 aaKnown RBP22.65■■□□□ 1.22
PACRGL-217ENST00000506951 PCDH15Q96QU1 1955 aa22.65■■□□□ 1.22
PACRGL-217ENST00000506951 ADAMTS9Q9P2N4 1935 aa22.65■■□□□ 1.22
PACRGL-217ENST00000506951 CSRP1P21291 193 aaKnown RBP22.64■■□□□ 1.21
PACRGL-217ENST00000506951 NOVA1P51513 510 aaKnown RBP22.64■■□□□ 1.21
PACRGL-217ENST00000506951 ECT2LQ008S8 904 aa22.64■■□□□ 1.21
PACRGL-217ENST00000506951 UAP1L1Q3KQV9 507 aa22.64■■□□□ 1.21
PACRGL-217ENST00000506951 FAM102AQ5T9C2 384 aaPredicted RBP22.64■■□□□ 1.21
PACRGL-217ENST00000506951 CCAR2Q8N163 923 aaKnown RBP22.64■■□□□ 1.21
PACRGL-217ENST00000506951 ZNF366Q8N895 744 aa22.64■■□□□ 1.21
PACRGL-217ENST00000506951 EPS8L1Q8TE68 723 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms