RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 TJP2Q9UDY2 1190 aa20.68■□□□□ 0.9
UBE2D3-220ENST00000505307 NCKAP1Q9Y2A7 1128 aa20.68■□□□□ 0.9
UBE2D3-220ENST00000505307 C1QTNF9BB2RNN3 333 aa20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 SH3BP5O60239 455 aa20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 LUC7L3O95232 432 aaKnown RBP20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 SEMA4FO95754 770 aa20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 TRUB2O95900 331 aaKnown RBP20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 TOP3BO95985 862 aaKnown RBP20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 MOCS2O96007 188 aaPredicted RBP20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 IGLV3-25P01717 112 aa20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 SRPRAP08240 638 aaKnown RBP20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 C1QTNF9P0C862 333 aa20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 ACSL1P33121 698 aa20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 CSKP41240 450 aa20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 MATKP42679 507 aa20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 SNX16P57768 344 aa20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 MTA1Q13330 715 aa20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 PDCLQ13371 301 aa20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 TEAD4Q15561 434 aa20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 EXOC3L4Q17RC7 722 aa20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 DCAF6Q58WW2 860 aa20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 CREBRFQ8IUR6 639 aa20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 NAXDQ8IW45 347 aa20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 ATP6V0D2Q8N8Y2 350 aa20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 MLKLQ8NB16 471 aa20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 ADAM32Q8TC27 787 aa20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 CRACR2AQ9BSW2 395 aa20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 C6orf106Q9H6K1 298 aaPredicted RBP20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 ASNSD1Q9NWL6 643 aa20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 MSRB2Q9Y3D2 182 aa20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 MUC22E2RYF6 1773 aaPredicted RBP20.67■□□□□ 0.9
UBE2D3-220ENST00000505307 TARSL2A2RTX5 802 aaKnown RBP20.66■□□□□ 0.9
UBE2D3-220ENST00000505307 CDK17Q00537 523 aa20.66■□□□□ 0.9
UBE2D3-220ENST00000505307 SLC12A1Q13621 1099 aa20.66■□□□□ 0.9
UBE2D3-220ENST00000505307 ZC3H12AQ5D1E8 599 aaKnown RBP20.66■□□□□ 0.9
UBE2D3-220ENST00000505307 CHSY1Q86X52 802 aa20.66■□□□□ 0.9
UBE2D3-220ENST00000505307 LGI2Q8N0V4 545 aa20.66■□□□□ 0.9
UBE2D3-220ENST00000505307 SHC3Q92529 594 aa20.66■□□□□ 0.9
UBE2D3-220ENST00000505307 SNX19Q92543 992 aa20.66■□□□□ 0.9
UBE2D3-220ENST00000505307 GATA6Q92908 595 aa20.66■□□□□ 0.9
UBE2D3-220ENST00000505307 MYO19Q96H55 970 aa20.66■□□□□ 0.9
UBE2D3-220ENST00000505307 NOX5Q96PH1 765 aa20.66■□□□□ 0.9
UBE2D3-220ENST00000505307 TMEM121BQ9BXQ6 578 aaPredicted RBP20.66■□□□□ 0.9
UBE2D3-220ENST00000505307 GAREM1Q9H706 876 aa20.66■□□□□ 0.9
UBE2D3-220ENST00000505307 CYTH4Q9UIA0 394 aa20.66■□□□□ 0.9
UBE2D3-220ENST00000505307 INTS6Q9UL03 887 aaKnown RBP20.66■□□□□ 0.9
UBE2D3-220ENST00000505307 PCDHGC3Q9UN70 934 aa20.66■□□□□ 0.9
UBE2D3-220ENST00000505307 PCDHGB2Q9Y5G2 931 aa20.66■□□□□ 0.9
UBE2D3-220ENST00000505307 FAM221BA6H8Z2 402 aa20.65■□□□□ 0.9
UBE2D3-220ENST00000505307 HYAL3O43820 417 aaPredicted RBP20.65■□□□□ 0.9
UBE2D3-220ENST00000505307 PRKCSHP14314 528 aaPredicted RBP20.65■□□□□ 0.9
UBE2D3-220ENST00000505307 SLC9A1P19634 815 aa20.65■□□□□ 0.9
UBE2D3-220ENST00000505307 TACR2P21452 398 aa20.65■□□□□ 0.9
UBE2D3-220ENST00000505307 CD27P26842 260 aa20.65■□□□□ 0.9
UBE2D3-220ENST00000505307 USP8P40818 1118 aa20.65■□□□□ 0.9
UBE2D3-220ENST00000505307 OXCT1P55809 520 aa20.65■□□□□ 0.9
UBE2D3-220ENST00000505307 FAM193AP78312 1265 aa20.65■□□□□ 0.9
UBE2D3-220ENST00000505307 PTK2Q05397 1052 aa20.65■□□□□ 0.9
UBE2D3-220ENST00000505307 EIF4EBP2Q13542 120 aaPredicted RBP20.65■□□□□ 0.9
UBE2D3-220ENST00000505307 CAMK4Q16566 473 aa20.65■□□□□ 0.9
UBE2D3-220ENST00000505307 ARHGAP44Q17R89 818 aa20.65■□□□□ 0.9
UBE2D3-220ENST00000505307 HLA-BQ31612 363 aa20.65■□□□□ 0.9
UBE2D3-220ENST00000505307 PITRM1Q5JRX3 1037 aa20.65■□□□□ 0.9
UBE2D3-220ENST00000505307 EFHC1Q5JVL4 640 aa20.65■□□□□ 0.9
UBE2D3-220ENST00000505307 TTC39BQ5VTQ0 682 aaPredicted RBP20.65■□□□□ 0.9
UBE2D3-220ENST00000505307 CFAP52Q8N1V2 620 aa20.65■□□□□ 0.9
UBE2D3-220ENST00000505307 MRGPRX3Q96LB0 322 aa20.65■□□□□ 0.9
UBE2D3-220ENST00000505307 PPP1R9BQ96SB3 815 aa20.65■□□□□ 0.9
UBE2D3-220ENST00000505307 PABPC3Q9H361 631 aaKnown RBP20.65■□□□□ 0.9
UBE2D3-220ENST00000505307 ERVW-1Q9UQF0 538 aa20.65■□□□□ 0.9
UBE2D3-220ENST00000505307 ITIH6Q6UXX5 1313 aa20.64■□□□□ 0.89
UBE2D3-220ENST00000505307 BECN2A8MW95 431 aa20.64■□□□□ 0.89
UBE2D3-220ENST00000505307 KCNU1A8MYU2 1149 aa20.64■□□□□ 0.89
UBE2D3-220ENST00000505307 F5H5T6 163 aa20.64■□□□□ 0.89
UBE2D3-220ENST00000505307 ABCB4P21439 1286 aa20.64■□□□□ 0.89
UBE2D3-220ENST00000505307 CCR1P32246 355 aa20.64■□□□□ 0.89
UBE2D3-220ENST00000505307 NNMTP40261 264 aa20.64■□□□□ 0.89
UBE2D3-220ENST00000505307 GRIA4P48058 902 aa20.64■□□□□ 0.89
UBE2D3-220ENST00000505307 ECT2LQ008S8 904 aa20.64■□□□□ 0.89
UBE2D3-220ENST00000505307 SUZ12Q15022 739 aaKnown RBP20.64■□□□□ 0.89
UBE2D3-220ENST00000505307 FSCBQ5H9T9 825 aa20.64■□□□□ 0.89
UBE2D3-220ENST00000505307 RNF219Q5W0B1 726 aaPredicted RBP20.64■□□□□ 0.89
UBE2D3-220ENST00000505307 RAP1GAP2Q684P5 730 aa20.64■□□□□ 0.89
UBE2D3-220ENST00000505307 GJB7Q6PEY0 223 aa20.64■□□□□ 0.89
UBE2D3-220ENST00000505307 RAB44Q7Z6P3 723 aaPredicted RBP20.64■□□□□ 0.89
UBE2D3-220ENST00000505307 GLRX5Q86SX6 157 aa20.64■□□□□ 0.89
UBE2D3-220ENST00000505307 BIRC7Q96CA5 298 aa20.64■□□□□ 0.89
UBE2D3-220ENST00000505307 MYEOVQ96EZ4 313 aa20.64■□□□□ 0.89
UBE2D3-220ENST00000505307 PPP1R13BQ96KQ4 1090 aa20.64■□□□□ 0.89
UBE2D3-220ENST00000505307 TM7SF3Q9NS93 570 aa20.64■□□□□ 0.89
UBE2D3-220ENST00000505307 APOBEC2Q9Y235 224 aaKnown RBP20.64■□□□□ 0.89
UBE2D3-220ENST00000505307 EDDM13A0A1B0GTR0 161 aa20.63■□□□□ 0.89
UBE2D3-220ENST00000505307 A0A1B0GVT2 93 aa20.63■□□□□ 0.89
UBE2D3-220ENST00000505307 HSF2BPO75031 334 aa20.63■□□□□ 0.89
UBE2D3-220ENST00000505307 SIN3BO75182 1162 aa20.63■□□□□ 0.89
UBE2D3-220ENST00000505307 PON1P27169 355 aa20.63■□□□□ 0.89
UBE2D3-220ENST00000505307 MTIF2P46199 727 aaKnown RBP20.63■□□□□ 0.89
UBE2D3-220ENST00000505307 CSNK1EP49674 416 aaKnown RBP20.63■□□□□ 0.89
UBE2D3-220ENST00000505307 BNC1Q01954 994 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms