RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 CDH4P55283 916 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 TAS2R40P59535 323 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 DPYSL2Q16555 572 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 CA9Q16790 459 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 FAM72AQ5TYM5 149 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 LRRC38Q5VT99 294 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 FAM72DQ6L9T8 149 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 FAM72BQ86X60 149 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 ZNF687Q8N1G0 1237 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 PYROXD2Q8N2H3 581 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 FAM71BQ8TC56 605 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 BHMTQ93088 406 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 EPAS1Q99814 870 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 OSBPL6Q9BZF3 934 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 ZYG11BQ9C0D3 744 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 DHX35Q9H5Z1 703 aaKnown RBP19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 DNAJC17Q9NVM6 304 aaKnown RBP19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 STIM2Q9P246 746 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 TRIM10Q9UDY6 481 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 CLEC4EQ9ULY5 219 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 PPP2R2CQ9Y2T4 447 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 DRD1P21728 446 aa19.97■□□□□ 0.79
PCOLCE-208ENST00000487172 COMTP21964 271 aa19.97■□□□□ 0.79
PCOLCE-208ENST00000487172 SSR1P43307 286 aaKnown RBP19.97■□□□□ 0.79
PCOLCE-208ENST00000487172 HCAR3P49019 387 aa19.97■□□□□ 0.79
PCOLCE-208ENST00000487172 DGKGP49619 791 aa19.97■□□□□ 0.79
PCOLCE-208ENST00000487172 PON2Q15165 354 aa19.97■□□□□ 0.79
PCOLCE-208ENST00000487172 KCNT1Q5JUK3 1230 aa19.97■□□□□ 0.79
PCOLCE-208ENST00000487172 TXNRD3NBQ6F5E7 133 aa19.97■□□□□ 0.79
PCOLCE-208ENST00000487172 GRAMD4Q6IC98 578 aa19.97■□□□□ 0.79
PCOLCE-208ENST00000487172 BMP8AQ7Z5Y6 402 aa19.97■□□□□ 0.79
PCOLCE-208ENST00000487172 MFN1Q8IWA4 741 aa19.97■□□□□ 0.79
PCOLCE-208ENST00000487172 CCDC117Q8IWD4 279 aaPredicted RBP19.97■□□□□ 0.79
PCOLCE-208ENST00000487172 CCAR2Q8N163 923 aaKnown RBP19.97■□□□□ 0.79
PCOLCE-208ENST00000487172 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.97■□□□□ 0.79
PCOLCE-208ENST00000487172 TBC1D31Q96DN5 1066 aa19.97■□□□□ 0.79
PCOLCE-208ENST00000487172 EPHX3Q9H6B9 360 aa19.97■□□□□ 0.79
PCOLCE-208ENST00000487172 ZWILCHQ9H900 591 aa19.97■□□□□ 0.79
PCOLCE-208ENST00000487172 TBC1D17Q9HA65 648 aa19.97■□□□□ 0.79
PCOLCE-208ENST00000487172 FBRSL1Q9HCM7 1045 aaKnown RBP19.97■□□□□ 0.79
PCOLCE-208ENST00000487172 LTB4R2Q9NPC1 389 aa19.97■□□□□ 0.79
PCOLCE-208ENST00000487172 GPATCH2LQ9NWQ4 482 aa19.97■□□□□ 0.79
PCOLCE-208ENST00000487172 MIA3Q5JRA6 1907 aa19.97■□□□□ 0.79
PCOLCE-208ENST00000487172 MACROD2A1Z1Q3 448 aa19.96■□□□□ 0.79
PCOLCE-208ENST00000487172 TMEM221A6NGB7 291 aa19.96■□□□□ 0.79
PCOLCE-208ENST00000487172 M0R296 226 aa19.96■□□□□ 0.79
PCOLCE-208ENST00000487172 CD72P21854 359 aa19.96■□□□□ 0.79
PCOLCE-208ENST00000487172 GRIA2P42262 883 aa19.96■□□□□ 0.79
PCOLCE-208ENST00000487172 IRAK1P51617 712 aa19.96■□□□□ 0.79
PCOLCE-208ENST00000487172 OXCT1P55809 520 aa19.96■□□□□ 0.79
PCOLCE-208ENST00000487172 GRSF1Q12849 480 aaKnown RBP eCLIP19.96■□□□□ 0.79
PCOLCE-208ENST00000487172 SMTNL2Q2TAL5 461 aa19.96■□□□□ 0.79
PCOLCE-208ENST00000487172 ALFQ53S48 1182 aa19.96■□□□□ 0.79
PCOLCE-208ENST00000487172 NAIF1Q69YI7 327 aaPredicted RBP19.96■□□□□ 0.79
PCOLCE-208ENST00000487172 NUDT18Q6ZVK8 323 aa19.96■□□□□ 0.79
PCOLCE-208ENST00000487172 KIAA0907Q7Z7F0 614 aaPredicted RBP19.96■□□□□ 0.79
PCOLCE-208ENST00000487172 DAAM2Q86T65 1068 aa19.96■□□□□ 0.79
PCOLCE-208ENST00000487172 RHOT1Q8IXI2 618 aa19.96■□□□□ 0.79
PCOLCE-208ENST00000487172 CARNMT1Q8N4J0 409 aa19.96■□□□□ 0.79
PCOLCE-208ENST00000487172 KIAA1524Q8TCG1 905 aa19.96■□□□□ 0.79
PCOLCE-208ENST00000487172 UBE2Q2Q8WVN8 375 aa19.96■□□□□ 0.79
PCOLCE-208ENST00000487172 LMLNQ96KR4 655 aa19.96■□□□□ 0.79
PCOLCE-208ENST00000487172 KCTD15Q96SI1 283 aaPredicted RBP19.96■□□□□ 0.79
PCOLCE-208ENST00000487172 ARHGEF4Q9NR80 690 aa19.96■□□□□ 0.79
PCOLCE-208ENST00000487172 ZNF212Q9UDV6 495 aa19.96■□□□□ 0.79
PCOLCE-208ENST00000487172 NEU3Q9UQ49 428 aa19.96■□□□□ 0.79
PCOLCE-208ENST00000487172 TBC1D30Q9Y2I9 924 aa19.96■□□□□ 0.79
PCOLCE-208ENST00000487172 TECTAO75443 2155 aa19.95■□□□□ 0.78
PCOLCE-208ENST00000487172 GRID2IPA4D2P6 1211 aa19.95■□□□□ 0.78
PCOLCE-208ENST00000487172 WASH4PA8MWX3 477 aa19.95■□□□□ 0.78
PCOLCE-208ENST00000487172 H0Y626 953 aa19.95■□□□□ 0.78
PCOLCE-208ENST00000487172 SPOPO43791 374 aa19.95■□□□□ 0.78
PCOLCE-208ENST00000487172 CNTN5O94779 1100 aa19.95■□□□□ 0.78
PCOLCE-208ENST00000487172 KAT7O95251 611 aa19.95■□□□□ 0.78
PCOLCE-208ENST00000487172 APODP05090 189 aa19.95■□□□□ 0.78
PCOLCE-208ENST00000487172 RHOQP17081 205 aa19.95■□□□□ 0.78
PCOLCE-208ENST00000487172 HLA-FP30511 346 aa19.95■□□□□ 0.78
PCOLCE-208ENST00000487172 ARSEP51690 589 aa19.95■□□□□ 0.78
PCOLCE-208ENST00000487172 CDH18Q13634 790 aa19.95■□□□□ 0.78
PCOLCE-208ENST00000487172 ATP13A4Q4VNC1 1196 aa19.95■□□□□ 0.78
PCOLCE-208ENST00000487172 DGKKQ5KSL6 1271 aa19.95■□□□□ 0.78
PCOLCE-208ENST00000487172 ASTLQ6HA08 431 aaPredicted RBP19.95■□□□□ 0.78
PCOLCE-208ENST00000487172 FSTL4Q6MZW2 842 aa19.95■□□□□ 0.78
PCOLCE-208ENST00000487172 SYCE1Q8N0S2 351 aa19.95■□□□□ 0.78
PCOLCE-208ENST00000487172 LRRC57Q8N9N7 239 aa19.95■□□□□ 0.78
PCOLCE-208ENST00000487172 TERB1Q8NA31 727 aa19.95■□□□□ 0.78
PCOLCE-208ENST00000487172 HSPH1Q92598 858 aa19.95■□□□□ 0.78
PCOLCE-208ENST00000487172 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.95■□□□□ 0.78
PCOLCE-208ENST00000487172 MPP6Q9NZW5 540 aa19.95■□□□□ 0.78
PCOLCE-208ENST00000487172 KIAA1522Q9P206 1035 aaPredicted RBP19.95■□□□□ 0.78
PCOLCE-208ENST00000487172 RCOR3Q9P2K3 495 aaPredicted RBP19.95■□□□□ 0.78
PCOLCE-208ENST00000487172 GUCA1BQ9UMX6 200 aa19.95■□□□□ 0.78
PCOLCE-208ENST00000487172 F5P12259 2224 aa19.95■□□□□ 0.78
PCOLCE-208ENST00000487172 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.94■□□□□ 0.78
PCOLCE-208ENST00000487172 TRIM24O15164 1050 aa19.94■□□□□ 0.78
PCOLCE-208ENST00000487172 NCAM2O15394 837 aa19.94■□□□□ 0.78
PCOLCE-208ENST00000487172 FGF10O15520 208 aaPredicted RBP19.94■□□□□ 0.78
PCOLCE-208ENST00000487172 ZSCAN12O43309 604 aa19.94■□□□□ 0.78
PCOLCE-208ENST00000487172 PSTPIP1O43586 416 aa19.94■□□□□ 0.78
PCOLCE-208ENST00000487172 CREB3O43889 395 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms