RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 NFKBIAP25963 317 aa8.15□□□□□ -1.11
TPM3-215ENST00000469717 MRPS9P82933 396 aaKnown RBP8.15□□□□□ -1.11
TPM3-215ENST00000469717 OLIG2Q13516 323 aa8.15□□□□□ -1.11
TPM3-215ENST00000469717 DLG2Q15700 870 aa8.15□□□□□ -1.11
TPM3-215ENST00000469717 CYP2A13Q16696 494 aa8.15□□□□□ -1.11
TPM3-215ENST00000469717 MTX3Q5HYI7 312 aa8.15□□□□□ -1.11
TPM3-215ENST00000469717 LRRC38Q5VT99 294 aa8.15□□□□□ -1.11
TPM3-215ENST00000469717 ENOSF1Q7L5Y1 443 aa8.15□□□□□ -1.11
TPM3-215ENST00000469717 DPH6Q7L8W6 267 aa8.15□□□□□ -1.11
TPM3-215ENST00000469717 FAM47BQ8NA70 645 aa8.15□□□□□ -1.11
TPM3-215ENST00000469717 HEPHQ9BQS7 1158 aa8.15□□□□□ -1.11
TPM3-215ENST00000469717 GLIS2Q9BZE0 524 aaPredicted RBP8.15□□□□□ -1.11
TPM3-215ENST00000469717 PLGRKTQ9HBL7 147 aa8.15□□□□□ -1.11
TPM3-215ENST00000469717 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.15□□□□□ -1.11
TPM3-215ENST00000469717 TRIM17Q9Y577 477 aa8.15□□□□□ -1.11
TPM3-215ENST00000469717 LTBP4Q8N2S1 1624 aa8.15□□□□□ -1.11
TPM3-215ENST00000469717 A8MU76 341 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 OCM2P0CE71 109 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 OCMP0CE72 109 aaPredicted RBP8.14□□□□□ -1.11
TPM3-215ENST00000469717 KRT3P12035 628 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 PIK3R1P27986 724 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 EPHX2P34913 555 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 RAP1GAPP47736 663 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 CDH6P55285 790 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 RALGDSQ12967 914 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 DGKZQ13574 1117 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 C15orf59Q2T9L4 293 aaPredicted RBP8.14□□□□□ -1.11
TPM3-215ENST00000469717 OLFML1Q6UWY5 402 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 DLK2Q6UY11 383 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 ZNF534Q76KX8 674 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 SNX29P2Q8IUI4 249 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 PCDH20Q8N6Y1 951 aaKnown RBP8.14□□□□□ -1.11
TPM3-215ENST00000469717 VCPIP1Q96JH7 1222 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 CEP41Q9BYV8 373 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 APOC4-APOC2K7ER74 178 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 E2F6O75461 281 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 APOC2P02655 101 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 LTFP02788 710 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 UGT1A6P19224 532 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 MPSTP25325 297 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 ALDH3B2P48448 385 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 FSTL1Q12841 308 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 PDAP1Q13442 181 aaKnown RBP8.14□□□□□ -1.11
TPM3-215ENST00000469717 PIGHQ14442 188 aaPredicted RBP8.14□□□□□ -1.11
TPM3-215ENST00000469717 USP41Q3LFD5 358 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 PIGGQ5H8A4 983 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 LDLRAP1Q5SW96 308 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 KRT80Q6KB66 452 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 TMEM214Q6NUQ4 689 aaKnown RBP8.14□□□□□ -1.11
TPM3-215ENST00000469717 BORAQ6PGQ7 559 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 BNC2Q6ZN30 1099 aaPredicted RBP8.14□□□□□ -1.11
TPM3-215ENST00000469717 DCDC5Q6ZRR9 648 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 CENPSQ8N2Z9 138 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 FIBCD1Q8N539 461 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 SAMD3Q8N6K7 520 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 DQX1Q8TE96 717 aaKnown RBP8.14□□□□□ -1.11
TPM3-215ENST00000469717 DDI1Q8WTU0 396 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 UPF1Q92900 1129 aaKnown RBP eCLIP8.14□□□□□ -1.117e-32■■■■□ 24.9
TPM3-215ENST00000469717 GMCL1Q96IK5 515 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 GCOM2Q9BZD3 368 aaPredicted RBP8.14□□□□□ -1.11
TPM3-215ENST00000469717 UNKQ9C0B0 810 aaKnown RBP8.14□□□□□ -1.11
TPM3-215ENST00000469717 DDX56Q9NY93 547 aaKnown RBP8.14□□□□□ -1.11
TPM3-215ENST00000469717 PLK2Q9NYY3 685 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 EXOC7Q9UPT5 735 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 PRSS51A0A1B0GVH4 220 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 WDR27A2RRH5 827 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 NRP1O14786 923 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 H6PDO95479 791 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 RALBP11234 206 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 CD19P15391 556 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 TNFSF9P41273 254 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 GABRB2P47870 512 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 UTS2BQ765I0 119 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 TANKQ92844 425 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 CEP170P1Q96L14 293 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 CPXM1Q96SM3 734 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 NUF2Q9BZD4 464 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 CAB39LQ9H9S4 337 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 SACM1LQ9NTJ5 587 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 SNX13Q9Y5W8 968 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 SIPA1L1O43166 1804 aa8.14□□□□□ -1.11
TPM3-215ENST00000469717 BIRC5O15392 142 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 HMGCRP04035 888 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 ALDH2P05091 517 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 SERPINE1P05121 402 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 UGT1A1P22309 533 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 UGT1A4P22310 534 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 RCVRNP35243 200 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 UGT1A3P35503 534 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 UGT1A5P35504 534 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 ABCE1P61221 599 aaKnown RBP8.13□□□□□ -1.11
TPM3-215ENST00000469717 IRF9Q00978 393 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 GNA12Q03113 381 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 TKFCQ3LXA3 575 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 GPR107Q5VW38 600 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 DCAF15Q66K64 600 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 TMEM26Q6ZUK4 368 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 ARCQ7LC44 396 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 BTLAQ7Z6A9 289 aa8.13□□□□□ -1.11
TPM3-215ENST00000469717 LDHDQ86WU2 507 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms