RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 BRCC3P46736 316 aa14.11□□□□□ -0.15
BRAT1-203ENST00000467558 CPA2P48052 419 aa14.11□□□□□ -0.15
BRAT1-203ENST00000467558 CSHL1Q14406 222 aa14.11□□□□□ -0.15
BRAT1-203ENST00000467558 INPP5AQ14642 412 aa14.11□□□□□ -0.15
BRAT1-203ENST00000467558 PDCD2Q16342 344 aaPredicted RBP14.11□□□□□ -0.15
BRAT1-203ENST00000467558 ASTE1Q2TB18 679 aaPredicted RBP14.11□□□□□ -0.15
BRAT1-203ENST00000467558 CCDC153Q494R4 210 aa14.11□□□□□ -0.15
BRAT1-203ENST00000467558 TTMPQ5BVD1 217 aa14.11□□□□□ -0.15
BRAT1-203ENST00000467558 N4BP2L1Q5TBK1 243 aaPredicted RBP14.11□□□□□ -0.15
BRAT1-203ENST00000467558 ZNF558Q96NG5 402 aa14.11□□□□□ -0.15
BRAT1-203ENST00000467558 TBL1YQ9BQ87 522 aa14.11□□□□□ -0.15
BRAT1-203ENST00000467558 GID8Q9NWU2 228 aa14.11□□□□□ -0.15
BRAT1-203ENST00000467558 SLC45A1Q9Y2W3 748 aa14.11□□□□□ -0.15
BRAT1-203ENST00000467558 SEPT4O43236 478 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 MTA2O94776 668 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 KRT16P08779 473 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 ELNP15502 786 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 PSMB4P28070 264 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 MMP13P45452 471 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 XRCC4Q13426 336 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 SKIV2LQ15477 1246 aaKnown RBP14.1□□□□□ -0.15
BRAT1-203ENST00000467558 KAT2BQ92831 832 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 NRBF2Q96F24 287 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 ZFP42Q96MM3 310 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 POLR1EQ9GZS1 481 aaKnown RBP14.1□□□□□ -0.15
BRAT1-203ENST00000467558 ATXN3LQ9H3M9 355 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 YY1AP1Q9H869 796 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 PCDH18Q9HCL0 1135 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 ADGRA2Q96PE1 1338 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 A0A096LPK6 155 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 LRCH4O75427 683 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 ARHGAP1Q07960 439 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 ZNF470Q6ECI4 717 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 MYCBPQ99417 103 aaPredicted RBP14.1□□□□□ -0.15
BRAT1-203ENST00000467558 EIF2AQ9BY44 585 aaKnown RBP14.1□□□□□ -0.15
BRAT1-203ENST00000467558 B3GNT5Q9BYG0 378 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 SLC40A1Q9NP59 571 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 WWOXQ9NZC7 414 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 UBA2Q9UBT2 640 aaPredicted RBP14.1□□□□□ -0.15
BRAT1-203ENST00000467558 LGR5O75473 907 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 SHBGP04278 402 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 FLT3P36888 993 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 HECTD3Q5T447 861 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 SDE2Q6IQ49 451 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 CES3Q6UWW8 571 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 SLC24A5Q71RS6 500 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 SLC4A11Q8NBS3 891 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 DDX20Q9UHI6 824 aaKnown RBP14.1□□□□□ -0.15
BRAT1-203ENST00000467558 OR6C75A6NL08 312 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 TSPAN3O60637 253 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 SKAP2O75563 359 aaPredicted RBP14.1□□□□□ -0.15
BRAT1-203ENST00000467558 DDHD2O94830 711 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 CHRNB2P17787 502 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 ERFP50548 548 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 IQCKQ8N0W5 287 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 LPCAT1Q8NF37 534 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 ERVK-5Q9HDB9 667 aa14.1□□□□□ -0.15
BRAT1-203ENST00000467558 TRIM13O60858 407 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 SERPINE1P05121 402 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 HOXB8P17481 243 aaPredicted RBP14.09□□□□□ -0.15
BRAT1-203ENST00000467558 CRABP2P29373 138 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 PEX19P40855 299 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 CCL23P55773 120 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 MON1AQ86VX9 555 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 SNX31Q8N9S9 440 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 SHCBP1LQ9BZQ2 653 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 ING2Q9H160 280 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 TPBGLP0DKB5 382 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 CSH1P0DML2 217 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 CSH2P0DML3 217 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 THRAP10827 490 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 SCTRP47872 440 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 KCNK10P57789 538 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 KCNA10Q16322 511 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 SLC26A9Q7LBE3 791 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 TBC1D19Q8N5T2 526 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 CENPTQ96BT3 561 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 CIPCQ9C0C6 399 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 RXFP1Q9HBX9 757 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 CYP4F12Q9HCS2 524 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 TXNRD2Q9NNW7 524 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.09□□□□□ -0.15
BRAT1-203ENST00000467558 CDK7P50613 346 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 HIRAP54198 1017 aaPredicted RBP14.09□□□□□ -0.15
BRAT1-203ENST00000467558 USP41Q3LFD5 358 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 BRMS1LQ5PSV4 323 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 MTDHQ86UE4 582 aaKnown RBP14.09□□□□□ -0.15
BRAT1-203ENST00000467558 IFNEQ86WN2 208 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 SLC22A9Q8IVM8 553 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 MYO1HQ8N1T3 1032 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 STK32AQ8WU08 396 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 TUBGCP3Q96CW5 907 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 SNX27Q96L92 541 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 HAO1Q9UJM8 370 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 DNMT3LQ9UJW3 386 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 AURKCQ9UQB9 309 aa14.09□□□□□ -0.15
BRAT1-203ENST00000467558 ALOX15BO15296 676 aa14.08□□□□□ -0.15
BRAT1-203ENST00000467558 ARIH2O95376 493 aa14.08□□□□□ -0.15
BRAT1-203ENST00000467558 ADRA1BP35368 520 aa14.08□□□□□ -0.15
BRAT1-203ENST00000467558 PRKAA2P54646 552 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms