RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 SLC10A4Q96EP9 437 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 TRIM39Q9HCM9 518 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 ALG13Q9NP73 1137 aaKnown RBP10.99□□□□□ -0.65
LINC00342-202ENST00000448494 SAYSD1Q9NPB0 183 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 CNNM1Q9NRU3 951 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 SERPINB13Q9UIV8 391 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 DNMT3LQ9UJW3 386 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 ACAD8Q9UKU7 415 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 HCN4Q9Y3Q4 1203 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 ANKRD36CQ5JPF3 1778 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 COL22A1Q8NFW1 1626 aaPredicted RBP10.99□□□□□ -0.65
LINC00342-202ENST00000448494 CENPXA8MT69 81 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 NCAM2O15394 837 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 PI15O43692 258 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 LRRN2O75325 713 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 RRM1P23921 792 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 PRKAA2P54646 552 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 RAD23AP54725 363 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 BST2Q10589 180 aaKnown RBP10.99□□□□□ -0.65
LINC00342-202ENST00000448494 CEP55Q53EZ4 464 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 IZUMO3Q5VZ72 239 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 ADGRD1Q6QNK2 874 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 UNC45BQ8IWX7 931 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 GALNT12Q8IXK2 581 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 CADM2Q8N3J6 435 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 FAM47BQ8NA70 645 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 OLIG1Q8TAK6 271 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 SLC22A8Q8TCC7 542 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 PNPT1Q8TCS8 783 aaKnown RBP10.99□□□□□ -0.65
LINC00342-202ENST00000448494 MZB1Q8WU39 189 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 CD101Q93033 1021 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 ARHGEF26Q96DR7 871 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 TMEM80Q96HE8 168 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 NGLY1Q96IV0 654 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 CITED4Q96RK1 184 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 CDRT15Q96T59 188 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 MCMBPQ9BTE3 642 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 CYP4F11Q9HBI6 524 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 HOMER2Q9NSB8 354 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.99□□□□□ -0.65
LINC00342-202ENST00000448494 IPO11Q9UI26 975 aaKnown RBP10.99□□□□□ -0.65
LINC00342-202ENST00000448494 VPS28Q9UK41 221 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 COG5Q9UP83 839 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 RIPK3Q9Y572 518 aa10.99□□□□□ -0.65
LINC00342-202ENST00000448494 MN1Q10571 1320 aaPredicted RBP10.99□□□□□ -0.65
LINC00342-202ENST00000448494 TRPC5OSA6NMA1 111 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 EXTL3O43909 919 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 SLITRK5O94991 958 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 CPNE6O95741 557 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 ACTN1P12814 892 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 ATF7P17544 494 aaPredicted RBP10.98□□□□□ -0.65
LINC00342-202ENST00000448494 NELFEP18615 380 aaKnown RBP10.98□□□□□ -0.65
LINC00342-202ENST00000448494 HK2P52789 917 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 CENPCQ03188 943 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 KCNH2Q12809 1159 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 FLOT2Q14254 428 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 GTF2IRD2BQ6EKJ0 949 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 SYCE2Q6PIF2 218 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 SV2BQ7L1I2 683 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 ATG9AQ7Z3C6 839 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 GTF2IRD2Q86UP8 949 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 FAM83AQ86UY5 434 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 CRLF3Q8IUI8 442 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 ZCCHC7Q8N3Z6 543 aaKnown RBP10.98□□□□□ -0.65
LINC00342-202ENST00000448494 NGDNQ8NEJ9 315 aaKnown RBP10.98□□□□□ -0.65
LINC00342-202ENST00000448494 APPL2Q8NEU8 664 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 NXPE3Q969Y0 559 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 CEP95Q96GE4 821 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 BTBD6Q96KE9 485 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 RPRD1AQ96P16 312 aaPredicted RBP10.98□□□□□ -0.65
LINC00342-202ENST00000448494 OPALINQ96PE5 141 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 USB1Q9BQ65 265 aaKnown RBP10.98□□□□□ -0.65
LINC00342-202ENST00000448494 DHRS4Q9BTZ2 278 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 CHST12Q9NRB3 414 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 PCDHGA10Q9Y5H3 936 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 V9GY48 417 aaPredicted RBP10.98□□□□□ -0.65
LINC00342-202ENST00000448494 NRXN3Q9Y4C0 1643 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 C2orf81A6NN90 581 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 DAB1O75553 588 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 HLA-DRAP01903 254 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 PCCAP05165 728 aaPredicted RBP10.98□□□□□ -0.65
LINC00342-202ENST00000448494 PCNAP12004 261 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 MYL4P12829 197 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 JUNBP17275 347 aaPredicted RBP10.98□□□□□ -0.65
LINC00342-202ENST00000448494 MYF6P23409 242 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 DNAJB2P25686 324 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 TRIM23P36406 574 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 STAT1P42224 750 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 GPR85P60893 370 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 PPP2R5DQ14738 602 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 ACAP2Q15057 778 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 NRF1Q16656 503 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 YIF1BQ5BJH7 314 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 TRIM72Q6ZMU5 477 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 DENND5BQ6ZUT9 1274 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 ZBTB46Q86UZ6 589 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 ZC3H3Q8IXZ2 948 aaKnown RBP10.98□□□□□ -0.65
LINC00342-202ENST00000448494 ZNF786Q8N393 782 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 GLIS3Q8NEA6 775 aa10.98□□□□□ -0.65
LINC00342-202ENST00000448494 SEPT1Q8WYJ6 367 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms